RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 FBXO25Q8TCJ0 367 aa12.92□□□□□ -0.34
BDNF-218ENST00000533246 ERP44Q9BS26 406 aa12.92□□□□□ -0.34
BDNF-218ENST00000533246 POLR3CQ9BUI4 534 aaPredicted RBP12.92□□□□□ -0.34
BDNF-218ENST00000533246 MOV10L1Q9BXT6 1211 aaKnown RBP12.92□□□□□ -0.34
BDNF-218ENST00000533246 LRRC4BQ9NT99 713 aa12.92□□□□□ -0.34
BDNF-218ENST00000533246 TMA7Q9Y2S6 64 aaKnown RBP12.92□□□□□ -0.34
BDNF-218ENST00000533246 TACC3Q9Y6A5 838 aa12.92□□□□□ -0.34
BDNF-218ENST00000533246 RPS6KL1Q9Y6S9 549 aa12.92□□□□□ -0.34
BDNF-218ENST00000533246 PDE2AO00408 941 aaPredicted RBP12.91□□□□□ -0.34
BDNF-218ENST00000533246 CHN1P15882 459 aa12.91□□□□□ -0.34
BDNF-218ENST00000533246 TBXAS1P24557 533 aaPredicted RBP12.91□□□□□ -0.34
BDNF-218ENST00000533246 TTLL4Q14679 1199 aa12.91□□□□□ -0.34
BDNF-218ENST00000533246 PAPD7Q5XG87 772 aaKnown RBP12.91□□□□□ -0.34
BDNF-218ENST00000533246 CCDC33Q8N5R6 958 aa12.91□□□□□ -0.34
BDNF-218ENST00000533246 SEPT1Q8WYJ6 367 aa12.91□□□□□ -0.34
BDNF-218ENST00000533246 FAM84AQ96KN4 292 aa12.91□□□□□ -0.34
BDNF-218ENST00000533246 VPS11Q9H270 941 aa12.91□□□□□ -0.34
BDNF-218ENST00000533246 ETNK1Q9HBU6 452 aa12.91□□□□□ -0.34
BDNF-218ENST00000533246 KLHL8Q9P2G9 620 aaPredicted RBP12.91□□□□□ -0.34
BDNF-218ENST00000533246 RABL2BQ9UNT1 228 aa12.91□□□□□ -0.34
BDNF-218ENST00000533246 PFASO15067 1338 aa12.91□□□□□ -0.34
BDNF-218ENST00000533246 COPEO14579 308 aa12.91□□□□□ -0.34
BDNF-218ENST00000533246 APRTP07741 180 aa12.91□□□□□ -0.34
BDNF-218ENST00000533246 TMEM253P0C7T8 217 aa12.91□□□□□ -0.34
BDNF-218ENST00000533246 RARBP10826 455 aa12.91□□□□□ -0.34
BDNF-218ENST00000533246 KRT10P13645 584 aa12.91□□□□□ -0.34
BDNF-218ENST00000533246 VCAM1P19320 739 aa12.91□□□□□ -0.34
BDNF-218ENST00000533246 HSD17B3P37058 310 aa12.91□□□□□ -0.34
BDNF-218ENST00000533246 MAGEA8P43361 318 aa12.91□□□□□ -0.34
BDNF-218ENST00000533246 SCN4BQ8IWT1 228 aa12.91□□□□□ -0.34
BDNF-218ENST00000533246 ABI1Q8IZP0 508 aa12.91□□□□□ -0.34
BDNF-218ENST00000533246 AGAP3Q96P47 875 aa12.91□□□□□ -0.34
BDNF-218ENST00000533246 TLR10Q9BXR5 811 aa12.91□□□□□ -0.34
BDNF-218ENST00000533246 HACL1Q9UJ83 578 aa12.91□□□□□ -0.34
BDNF-218ENST00000533246 PCDHB2Q9Y5E7 798 aa12.91□□□□□ -0.34
BDNF-218ENST00000533246 SPDYE2BA6NHP3 402 aa12.91□□□□□ -0.34
BDNF-218ENST00000533246 EIF3HO15372 352 aaKnown RBP eCLIP12.91□□□□□ -0.34
BDNF-218ENST00000533246 BNIP3LO60238 219 aa12.91□□□□□ -0.34
BDNF-218ENST00000533246 E2F6O75461 281 aa12.91□□□□□ -0.34
BDNF-218ENST00000533246 MYL3P08590 195 aa12.91□□□□□ -0.34
BDNF-218ENST00000533246 SPDYE6P0CI01 402 aa12.91□□□□□ -0.34
BDNF-218ENST00000533246 RALAP11233 206 aa12.91□□□□□ -0.34
BDNF-218ENST00000533246 PDGFRAP16234 1089 aa12.91□□□□□ -0.34
BDNF-218ENST00000533246 TFDP2Q14188 446 aa12.91□□□□□ -0.34
BDNF-218ENST00000533246 PHLDB3Q6NSJ2 640 aa12.91□□□□□ -0.34
BDNF-218ENST00000533246 DEPDC1BQ8WUY9 529 aa12.91□□□□□ -0.34
BDNF-218ENST00000533246 FAM167AQ96KS9 214 aa12.91□□□□□ -0.34
BDNF-218ENST00000533246 EHD4Q9H223 541 aa12.91□□□□□ -0.34
BDNF-218ENST00000533246 VIPAS39Q9H9C1 493 aa12.91□□□□□ -0.34
BDNF-218ENST00000533246 IP6K2Q9UHH9 426 aa12.91□□□□□ -0.34
BDNF-218ENST00000533246 TLK1Q9UKI8 766 aa12.91□□□□□ -0.34
BDNF-218ENST00000533246 TBX20Q9UMR3 447 aa12.91□□□□□ -0.34
BDNF-218ENST00000533246 OPHN1O60890 802 aa12.91□□□□□ -0.34
BDNF-218ENST00000533246 GMNNO75496 209 aa12.91□□□□□ -0.34
BDNF-218ENST00000533246 CALCAP01258 141 aa12.91□□□□□ -0.34
BDNF-218ENST00000533246 PYGBP11216 843 aa12.91□□□□□ -0.34
BDNF-218ENST00000533246 GTF2H1P32780 548 aa12.91□□□□□ -0.34
BDNF-218ENST00000533246 NPTX2P47972 431 aa12.91□□□□□ -0.34
BDNF-218ENST00000533246 SESN2P58004 480 aaPredicted RBP12.91□□□□□ -0.34
BDNF-218ENST00000533246 ACTR2P61160 394 aa12.91□□□□□ -0.34
BDNF-218ENST00000533246 FUT2Q10981 343 aa12.91□□□□□ -0.34
BDNF-218ENST00000533246 DHX34Q14147 1143 aaKnown RBP12.91□□□□□ -0.34
BDNF-218ENST00000533246 KCNT1Q5JUK3 1230 aa12.91□□□□□ -0.34
BDNF-218ENST00000533246 ARHGAP18Q8N392 663 aa12.91□□□□□ -0.34
BDNF-218ENST00000533246 UBA3Q8TBC4 463 aa12.91□□□□□ -0.34
BDNF-218ENST00000533246 HNRNPLLQ8WVV9 542 aaKnown RBP12.91□□□□□ -0.34
BDNF-218ENST00000533246 SNF8Q96H20 258 aa12.91□□□□□ -0.34
BDNF-218ENST00000533246 DDX23Q9BUQ8 820 aaKnown RBP12.91□□□□□ -0.34
BDNF-218ENST00000533246 PARVAQ9NVD7 372 aa12.91□□□□□ -0.34
BDNF-218ENST00000533246 NEURL4Q96JN8 1562 aa12.9□□□□□ -0.34
BDNF-218ENST00000533246 LRRC10BA6NIK2 292 aa12.9□□□□□ -0.34
BDNF-218ENST00000533246 PGK2P07205 417 aa12.9□□□□□ -0.34
BDNF-218ENST00000533246 LCP1P13796 627 aa12.9□□□□□ -0.34
BDNF-218ENST00000533246 SLC47A2Q86VL8 602 aa12.9□□□□□ -0.34
BDNF-218ENST00000533246 CCHCR1Q8TD31 782 aa12.9□□□□□ -0.34
BDNF-218ENST00000533246 PURBQ96QR8 312 aaKnown RBP12.9□□□□□ -0.34
BDNF-218ENST00000533246 MMP19Q99542 508 aa12.9□□□□□ -0.34
BDNF-218ENST00000533246 ASNSD1Q9NWL6 643 aa12.9□□□□□ -0.34
BDNF-218ENST00000533246 CHMP2BQ9UQN3 213 aa12.9□□□□□ -0.34
BDNF-218ENST00000533246 KRT37O76014 449 aa12.9□□□□□ -0.34
BDNF-218ENST00000533246 SLITRK3O94933 977 aa12.9□□□□□ -0.34
BDNF-218ENST00000533246 NUMBP49757 651 aa12.9□□□□□ -0.34
BDNF-218ENST00000533246 PSMD7P51665 324 aa12.9□□□□□ -0.34
BDNF-218ENST00000533246 SFSWAPQ12872 951 aaKnown RBP12.9□□□□□ -0.34
BDNF-218ENST00000533246 MPP3Q13368 585 aa12.9□□□□□ -0.34
BDNF-218ENST00000533246 SLC12A1Q13621 1099 aa12.9□□□□□ -0.34
BDNF-218ENST00000533246 TSHZ1Q6ZSZ6 1077 aa12.9□□□□□ -0.34
BDNF-218ENST00000533246 GABPB2Q8TAK5 448 aaPredicted RBP12.9□□□□□ -0.34
BDNF-218ENST00000533246 ZNF473Q8WTR7 871 aaKnown RBP12.9□□□□□ -0.34
BDNF-218ENST00000533246 HAS1Q92839 578 aa12.9□□□□□ -0.34
BDNF-218ENST00000533246 KAT5Q92993 513 aa12.9□□□□□ -0.34
BDNF-218ENST00000533246 EXT2Q93063 718 aa12.9□□□□□ -0.34
BDNF-218ENST00000533246 MKNK1Q9BUB5 465 aa12.9□□□□□ -0.34
BDNF-218ENST00000533246 TMX2Q9Y320 296 aa12.9□□□□□ -0.34
BDNF-218ENST00000533246 E2F8A0AVK6 867 aa12.9□□□□□ -0.35
BDNF-218ENST00000533246 DYNC1LI2O43237 492 aaPredicted RBP12.9□□□□□ -0.35
BDNF-218ENST00000533246 KLRC4O43908 158 aa12.9□□□□□ -0.35
BDNF-218ENST00000533246 HUS1O60921 280 aa12.9□□□□□ -0.35
BDNF-218ENST00000533246 FAM153BP0C7A2 387 aa12.9□□□□□ -0.35
BDNF-218ENST00000533246 RRM1P23921 792 aa12.9□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms