RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 ADAM12O43184 909 aa16.68■□□□□ 0.26
CPSF1-210ENST00000532935 NFICP08651 508 aa16.68■□□□□ 0.26
CPSF1-210ENST00000532935 MCM4P33991 863 aa16.68■□□□□ 0.26
CPSF1-210ENST00000532935 HOXD13P35453 343 aa16.68■□□□□ 0.26
CPSF1-210ENST00000532935 SYKP43405 635 aa16.68■□□□□ 0.26
CPSF1-210ENST00000532935 TMEM132DQ14C87 1099 aa16.68■□□□□ 0.26
CPSF1-210ENST00000532935 ATAT1Q5SQI0 421 aa16.68■□□□□ 0.26
CPSF1-210ENST00000532935 SPATA1Q5VX52 437 aa16.68■□□□□ 0.26
CPSF1-210ENST00000532935 ANKS3Q6ZW76 656 aa16.68■□□□□ 0.26
CPSF1-210ENST00000532935 GPR149Q86SP6 731 aa16.68■□□□□ 0.26
CPSF1-210ENST00000532935 FSIP1Q8NA03 581 aa16.68■□□□□ 0.26
CPSF1-210ENST00000532935 ZSWIM2Q8NEG5 633 aa16.68■□□□□ 0.26
CPSF1-210ENST00000532935 BEST2Q8NFU1 509 aa16.68■□□□□ 0.26
CPSF1-210ENST00000532935 CMASQ8NFW8 434 aaPredicted RBP16.68■□□□□ 0.26
CPSF1-210ENST00000532935 FEZF2Q8TBJ5 459 aa16.68■□□□□ 0.26
CPSF1-210ENST00000532935 ZNF507Q8TCN5 953 aa16.68■□□□□ 0.26
CPSF1-210ENST00000532935 SAAL1Q96ER3 474 aa16.68■□□□□ 0.26
CPSF1-210ENST00000532935 RPGRIP1Q96KN7 1286 aa16.68■□□□□ 0.26
CPSF1-210ENST00000532935 SUSD3Q96L08 255 aa16.68■□□□□ 0.26
CPSF1-210ENST00000532935 CBWD1Q9BRT8 395 aa16.68■□□□□ 0.26
CPSF1-210ENST00000532935 PLEKHA4Q9H4M7 779 aa16.68■□□□□ 0.26
CPSF1-210ENST00000532935 POMKQ9H5K3 350 aa16.68■□□□□ 0.26
CPSF1-210ENST00000532935 TSC2P49815 1807 aa16.68■□□□□ 0.26
CPSF1-210ENST00000532935 UBE4BO95155 1302 aa16.68■□□□□ 0.26
CPSF1-210ENST00000532935 MYO10Q9HD67 2058 aa16.67■□□□□ 0.26
CPSF1-210ENST00000532935 SYN3O14994 580 aa16.67■□□□□ 0.26
CPSF1-210ENST00000532935 IL18RAPO95256 599 aa16.67■□□□□ 0.26
CPSF1-210ENST00000532935 LDHAP00338 332 aaKnown RBP16.67■□□□□ 0.26
CPSF1-210ENST00000532935 VARS2Q5ST30 1063 aaKnown RBP16.67■□□□□ 0.26
CPSF1-210ENST00000532935 ARMCX5Q6P1M9 558 aa16.67■□□□□ 0.26
CPSF1-210ENST00000532935 C15orf39Q6ZRI6 1047 aa16.67■□□□□ 0.26
CPSF1-210ENST00000532935 KREMEN2Q8NCW0 462 aa16.67■□□□□ 0.26
CPSF1-210ENST00000532935 GOLPH3LQ9H4A5 285 aa16.67■□□□□ 0.26
CPSF1-210ENST00000532935 PCIF1Q9H4Z3 704 aa16.67■□□□□ 0.26
CPSF1-210ENST00000532935 SLC39A2Q9NP94 309 aa16.67■□□□□ 0.26
CPSF1-210ENST00000532935 C2CD2Q9Y426 696 aa16.67■□□□□ 0.26
CPSF1-210ENST00000532935 BACE2Q9Y5Z0 518 aa16.67■□□□□ 0.26
CPSF1-210ENST00000532935 CCDC195A0A1B0GUA6 201 aa16.66■□□□□ 0.26
CPSF1-210ENST00000532935 GOLGA8IPA6NC78 632 aa16.66■□□□□ 0.26
CPSF1-210ENST00000532935 GOLGA8JA6NMD2 632 aa16.66■□□□□ 0.26
CPSF1-210ENST00000532935 KLRC4O43908 158 aa16.66■□□□□ 0.26
CPSF1-210ENST00000532935 EXTL3O43909 919 aa16.66■□□□□ 0.26
CPSF1-210ENST00000532935 OR1D2P34982 312 aa16.66■□□□□ 0.26
CPSF1-210ENST00000532935 RAB33AQ14088 237 aa16.66■□□□□ 0.26
CPSF1-210ENST00000532935 C9orf57Q5W0N0 161 aa16.66■□□□□ 0.26
CPSF1-210ENST00000532935 RSPO2Q6UXX9 243 aaPredicted RBP16.66■□□□□ 0.26
CPSF1-210ENST00000532935 BRSK2Q8IWQ3 736 aa16.66■□□□□ 0.26
CPSF1-210ENST00000532935 EFCAB13Q8IY85 973 aa16.66■□□□□ 0.26
CPSF1-210ENST00000532935 SCFD1Q8WVM8 642 aa16.66■□□□□ 0.26
CPSF1-210ENST00000532935 RBAKQ9NYW8 714 aaPredicted RBP16.66■□□□□ 0.26
CPSF1-210ENST00000532935 FBXW11Q9UKB1 542 aa16.66■□□□□ 0.26
CPSF1-210ENST00000532935 PCDHB8Q9UN66 801 aa16.66■□□□□ 0.26
CPSF1-210ENST00000532935 CDY1Q9Y6F8 540 aa16.66■□□□□ 0.26
CPSF1-210ENST00000532935 M0QZQ0 153 aa16.65■□□□□ 0.26
CPSF1-210ENST00000532935 PPEF2O14830 753 aa16.65■□□□□ 0.26
CPSF1-210ENST00000532935 KIAA0391O15091 583 aaKnown RBP16.65■□□□□ 0.26
CPSF1-210ENST00000532935 RFPL2O75678 378 aa16.65■□□□□ 0.26
CPSF1-210ENST00000532935 MYL1P05976 194 aa16.65■□□□□ 0.26
CPSF1-210ENST00000532935 SP100P23497 879 aaPredicted RBP16.65■□□□□ 0.26
CPSF1-210ENST00000532935 AARSP49588 968 aaKnown RBP eCLIP16.65■□□□□ 0.26
CPSF1-210ENST00000532935 WNT7BP56706 349 aa16.65■□□□□ 0.26
CPSF1-210ENST00000532935 MRPL58Q14197 206 aaKnown RBP16.65■□□□□ 0.26
CPSF1-210ENST00000532935 BMT2Q1RMZ1 405 aa16.65■□□□□ 0.26
CPSF1-210ENST00000532935 CYP26C1Q6V0L0 522 aa16.65■□□□□ 0.26
CPSF1-210ENST00000532935 NT5DC4Q86YG4 428 aa16.65■□□□□ 0.26
CPSF1-210ENST00000532935 RNF135Q8IUD6 432 aa16.65■□□□□ 0.26
CPSF1-210ENST00000532935 NELFCDQ8IXH7 590 aa16.65■□□□□ 0.26
CPSF1-210ENST00000532935 GPD1LQ8N335 351 aa16.65■□□□□ 0.26
CPSF1-210ENST00000532935 APPL2Q8NEU8 664 aa16.65■□□□□ 0.26
CPSF1-210ENST00000532935 NOC3LQ8WTT2 800 aaKnown RBP16.65■□□□□ 0.26
CPSF1-210ENST00000532935 RHOBTB2Q9BYZ6 727 aa16.65■□□□□ 0.26
CPSF1-210ENST00000532935 EPHX3Q9H6B9 360 aa16.65■□□□□ 0.26
CPSF1-210ENST00000532935 EXOC1Q9NV70 894 aa16.65■□□□□ 0.26
CPSF1-210ENST00000532935 ZDHHC7Q9NXF8 308 aa16.65■□□□□ 0.26
CPSF1-210ENST00000532935 NR2E1Q9Y466 385 aa16.65■□□□□ 0.26
CPSF1-210ENST00000532935 DOCK8Q8NF50 2099 aa16.65■□□□□ 0.26
CPSF1-210ENST00000532935 ANO9A1A5B4 782 aa16.64■□□□□ 0.25
CPSF1-210ENST00000532935 PI4K2BG5E9Z4 385 aa16.64■□□□□ 0.25
CPSF1-210ENST00000532935 H7C4K7 107 aa16.64■□□□□ 0.25
CPSF1-210ENST00000532935 PIRO00625 290 aa16.64■□□□□ 0.25
CPSF1-210ENST00000532935 TGFB1I1O43294 461 aa16.64■□□□□ 0.25
CPSF1-210ENST00000532935 TBC1D4O60343 1298 aa16.64■□□□□ 0.25
CPSF1-210ENST00000532935 ZMYND10O75800 440 aa16.64■□□□□ 0.25
CPSF1-210ENST00000532935 PAPLNO95428 1278 aa16.64■□□□□ 0.25
CPSF1-210ENST00000532935 LILRA4P59901 499 aa16.64■□□□□ 0.25
CPSF1-210ENST00000532935 KMT5BQ4FZB7 885 aa16.64■□□□□ 0.25
CPSF1-210ENST00000532935 LIN9Q5TKA1 542 aa16.64■□□□□ 0.25
CPSF1-210ENST00000532935 SLC8B1Q6J4K2 584 aa16.64■□□□□ 0.25
CPSF1-210ENST00000532935 ZNF707Q96C28 371 aaPredicted RBP16.64■□□□□ 0.25
CPSF1-210ENST00000532935 AGPAT3Q9NRZ7 376 aa16.64■□□□□ 0.25
CPSF1-210ENST00000532935 DPP3Q9NY33 737 aa16.64■□□□□ 0.25
CPSF1-210ENST00000532935 HSPBP1Q9NZL4 362 aa16.64■□□□□ 0.25
CPSF1-210ENST00000532935 TULP1O00294 542 aaPredicted RBP16.63■□□□□ 0.25
CPSF1-210ENST00000532935 DCXO43602 365 aa16.63■□□□□ 0.25
CPSF1-210ENST00000532935 ZNF202O95125 648 aa16.63■□□□□ 0.25
CPSF1-210ENST00000532935 PRR29P0C7W0 189 aa16.63■□□□□ 0.25
CPSF1-210ENST00000532935 ALADP13716 330 aa16.63■□□□□ 0.25
CPSF1-210ENST00000532935 PAX3P23760 479 aa16.63■□□□□ 0.25
CPSF1-210ENST00000532935 SNRPFP62306 86 aaKnown RBP16.63■□□□□ 0.25
CPSF1-210ENST00000532935 ROR1Q01973 937 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms