RNA–Protein interactions for RNA: ENST00000532737.1

USP48-214, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 680 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-214ENST00000532737 CACTINQ8WUQ7 758 aaKnown RBP26.84■■□□□ 1.89
USP48-214ENST00000532737 CHST7Q9NS84 486 aa26.84■■□□□ 1.89
USP48-214ENST00000532737 PIRO00625 290 aa26.83■■□□□ 1.89
USP48-214ENST00000532737 SMC1AQ14683 1233 aaKnown RBP26.83■■□□□ 1.89
USP48-214ENST00000532737 FAM171A1Q5VUB5 890 aa26.83■■□□□ 1.89
USP48-214ENST00000532737 TTI2Q6NXR4 508 aa26.83■■□□□ 1.89
USP48-214ENST00000532737 WDR49Q8IV35 697 aa26.83■■□□□ 1.89
USP48-214ENST00000532737 ZC3H3Q8IXZ2 948 aaKnown RBP26.83■■□□□ 1.89
USP48-214ENST00000532737 C1orf127Q8N9H9 656 aa26.83■■□□□ 1.89
USP48-214ENST00000532737 FNBP1Q96RU3 617 aa26.83■■□□□ 1.89
USP48-214ENST00000532737 MTMR12Q9C0I1 747 aa26.83■■□□□ 1.89
USP48-214ENST00000532737 CTNND2Q9UQB3 1225 aa26.83■■□□□ 1.89
USP48-214ENST00000532737 NUB1Q9Y5A7 615 aa26.83■■□□□ 1.89
USP48-214ENST00000532737 C2orf71A6NGG8 1288 aa26.82■■□□□ 1.88
USP48-214ENST00000532737 CETN3O15182 167 aa26.82■■□□□ 1.88
USP48-214ENST00000532737 LILRB3O75022 631 aa26.82■■□□□ 1.88
USP48-214ENST00000532737 TMEM191BP0C7N4 346 aa26.82■■□□□ 1.88
USP48-214ENST00000532737 PSMC2P35998 433 aaKnown RBP26.82■■□□□ 1.88
USP48-214ENST00000532737 STX17P56962 302 aa26.82■■□□□ 1.88
USP48-214ENST00000532737 FKBP3Q00688 224 aaKnown RBP26.82■■□□□ 1.88
USP48-214ENST00000532737 ELAVL2Q12926 359 aaKnown RBP26.82■■□□□ 1.88
USP48-214ENST00000532737 PTPN14Q15678 1187 aa26.82■■□□□ 1.88
USP48-214ENST00000532737 DUOXA2Q1HG44 320 aa26.82■■□□□ 1.88
USP48-214ENST00000532737 USP41Q3LFD5 358 aa26.82■■□□□ 1.88
USP48-214ENST00000532737 CCDC183Q5T5S1 534 aa26.82■■□□□ 1.88
USP48-214ENST00000532737 KIAA0319Q5VV43 1072 aa26.82■■□□□ 1.88
USP48-214ENST00000532737 MLKLQ8NB16 471 aa26.82■■□□□ 1.88
USP48-214ENST00000532737 CXorf38Q8TB03 319 aa26.82■■□□□ 1.88
USP48-214ENST00000532737 ADAMTS19Q8TE59 1207 aa26.82■■□□□ 1.88
USP48-214ENST00000532737 PARD3BQ8TEW8 1205 aa26.82■■□□□ 1.88
USP48-214ENST00000532737 ZNF516Q92618 1163 aa26.82■■□□□ 1.88
USP48-214ENST00000532737 CGRRF1Q99675 332 aa26.82■■□□□ 1.88
USP48-214ENST00000532737 DUSP9Q99956 384 aaKnown RBP26.82■■□□□ 1.88
USP48-214ENST00000532737 TMEM63CQ9P1W3 806 aa26.82■■□□□ 1.88
USP48-214ENST00000532737 XIRP2A4UGR9 3374 aa26.81■■□□□ 1.88
USP48-214ENST00000532737 C2CD2LO14523 706 aa26.81■■□□□ 1.88
USP48-214ENST00000532737 MAPK13O15264 365 aa26.81■■□□□ 1.88
USP48-214ENST00000532737 URODP06132 367 aa26.81■■□□□ 1.88
USP48-214ENST00000532737 TNNI1P19237 187 aa26.81■■□□□ 1.88
USP48-214ENST00000532737 GLUD2P49448 558 aa26.81■■□□□ 1.88
USP48-214ENST00000532737 DSG1Q02413 1049 aa26.81■■□□□ 1.88
USP48-214ENST00000532737 PAK1Q13153 545 aa26.81■■□□□ 1.88
USP48-214ENST00000532737 BMS1Q14692 1282 aaKnown RBP26.81■■□□□ 1.88
USP48-214ENST00000532737 RTP2Q5QGT7 225 aa26.81■■□□□ 1.88
USP48-214ENST00000532737 RBM23Q86U06 439 aaKnown RBP26.81■■□□□ 1.88
USP48-214ENST00000532737 FAM186BQ8IYM0 893 aa26.81■■□□□ 1.88
USP48-214ENST00000532737 ANKRD36BP1Q96IX9 119 aa26.81■■□□□ 1.88
USP48-214ENST00000532737 IRAK3Q9Y616 596 aa26.81■■□□□ 1.88
USP48-214ENST00000532737 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP26.8■■□□□ 1.88
USP48-214ENST00000532737 LRRIQ3A6PVS8 624 aaPredicted RBP26.8■■□□□ 1.88
USP48-214ENST00000532737 PER2O15055 1255 aa26.8■■□□□ 1.88
USP48-214ENST00000532737 SPTLC1O15269 473 aa26.8■■□□□ 1.88
USP48-214ENST00000532737 TRAPPC3O43617 180 aa26.8■■□□□ 1.88
USP48-214ENST00000532737 TNNC2P02585 160 aa26.8■■□□□ 1.88
USP48-214ENST00000532737 ITGB3P05106 788 aa26.8■■□□□ 1.88
USP48-214ENST00000532737 FGFR3P22607 806 aa26.8■■□□□ 1.88
USP48-214ENST00000532737 POLR2BP30876 1174 aaKnown RBP26.8■■□□□ 1.88
USP48-214ENST00000532737 CA8P35219 290 aa26.8■■□□□ 1.88
USP48-214ENST00000532737 GTF2F1P35269 517 aaKnown RBP eCLIP26.8■■□□□ 1.88
USP48-214ENST00000532737 NLRP12P59046 1061 aa26.8■■□□□ 1.88
USP48-214ENST00000532737 DLG4P78352 724 aa26.8■■□□□ 1.88
USP48-214ENST00000532737 HYAL1Q12794 435 aa26.8■■□□□ 1.88
USP48-214ENST00000532737 DPCR1Q3MIW9 517 aa26.8■■□□□ 1.88
USP48-214ENST00000532737 KIAA1841Q6NSI8 718 aa26.8■■□□□ 1.88
USP48-214ENST00000532737 FOXR2Q6PJQ5 311 aa26.8■■□□□ 1.88
USP48-214ENST00000532737 CEP57Q86XR8 500 aa26.8■■□□□ 1.88
USP48-214ENST00000532737 CSGALNACT2Q8N6G5 542 aa26.8■■□□□ 1.88
USP48-214ENST00000532737 TMC2Q8TDI7 906 aa26.8■■□□□ 1.88
USP48-214ENST00000532737 BORCS6Q96GS4 357 aa26.8■■□□□ 1.88
USP48-214ENST00000532737 TTPALQ9BTX7 342 aa26.8■■□□□ 1.88
USP48-214ENST00000532737 TLE6Q9H808 572 aa26.8■■□□□ 1.88
USP48-214ENST00000532737 MRPL17Q9NRX2 175 aaKnown RBP26.8■■□□□ 1.88
USP48-214ENST00000532737 SIX4Q9UIU6 781 aa26.8■■□□□ 1.88
USP48-214ENST00000532737 ATG2AQ2TAZ0 1938 aa26.79■■□□□ 1.88
USP48-214ENST00000532737 BICDL2A1A5D9 508 aa26.79■■□□□ 1.88
USP48-214ENST00000532737 NRIP1P48552 1158 aa26.79■■□□□ 1.88
USP48-214ENST00000532737 AARSP49588 968 aaKnown RBP eCLIP26.79■■□□□ 1.88
USP48-214ENST00000532737 LILRA4P59901 499 aa26.79■■□□□ 1.88
USP48-214ENST00000532737 CLDN10P78369 228 aa26.79■■□□□ 1.88
USP48-214ENST00000532737 C1orf220Q5T0J3 134 aa26.79■■□□□ 1.88
USP48-214ENST00000532737 PDZRN4Q6ZMN7 1036 aaPredicted RBP26.79■■□□□ 1.88
USP48-214ENST00000532737 TRAPPC11Q7Z392 1133 aa26.79■■□□□ 1.88
USP48-214ENST00000532737 RIN2Q8WYP3 895 aaPredicted RBP26.79■■□□□ 1.88
USP48-214ENST00000532737 SUSD3Q96L08 255 aa26.79■■□□□ 1.88
USP48-214ENST00000532737 MED15Q96RN5 788 aa26.79■■□□□ 1.88
USP48-214ENST00000532737 MKNK1Q9BUB5 465 aa26.79■■□□□ 1.88
USP48-214ENST00000532737 ITGA11Q9UKX5 1188 aa26.79■■□□□ 1.88
USP48-214ENST00000532737 AGAP1Q9UPQ3 857 aa26.79■■□□□ 1.88
USP48-214ENST00000532737 BRWD1Q9NSI6 2320 aa26.78■■□□□ 1.88
USP48-214ENST00000532737 TKTP29401 623 aaKnown RBP26.78■■□□□ 1.88
USP48-214ENST00000532737 VAMP7P51809 220 aa26.78■■□□□ 1.88
USP48-214ENST00000532737 PRSS55Q6UWB4 352 aaPredicted RBP26.78■■□□□ 1.88
USP48-214ENST00000532737 IGFLR1Q9H665 355 aa26.78■■□□□ 1.88
USP48-214ENST00000532737 CNPP09543 421 aaKnown RBP26.77■■□□□ 1.88
USP48-214ENST00000532737 RBP5P82980 135 aa26.77■■□□□ 1.88
USP48-214ENST00000532737 DUSP6Q16828 381 aa26.77■■□□□ 1.88
USP48-214ENST00000532737 CAVIN1Q6NZI2 390 aaKnown RBP26.77■■□□□ 1.88
USP48-214ENST00000532737 INTS8Q75QN2 995 aaKnown RBP26.77■■□□□ 1.88
USP48-214ENST00000532737 GPR65Q8IYL9 337 aa26.77■■□□□ 1.88
USP48-214ENST00000532737 LNX1Q8TBB1 728 aaPredicted RBP26.77■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms