RNA–Protein interactions for RNA: ENST00000532600.1

SSH3-209, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 555 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-209ENST00000532600 ST6GALNAC4Q9H4F1 302 aa20.63■□□□□ 0.89
SSH3-209ENST00000532600 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.63■□□□□ 0.89
SSH3-209ENST00000532600 DNMT3BQ9UBC3 853 aaKnown RBP20.63■□□□□ 0.89
SSH3-209ENST00000532600 FBXL5Q9UKA1 691 aa20.63■□□□□ 0.89
SSH3-209ENST00000532600 CPSF3Q9UKF6 684 aaKnown RBP20.63■□□□□ 0.89
SSH3-209ENST00000532600 PPEF2O14830 753 aa20.62■□□□□ 0.89
SSH3-209ENST00000532600 PPP1R37O75864 691 aa20.62■□□□□ 0.89
SSH3-209ENST00000532600 SEC24AO95486 1093 aa20.62■□□□□ 0.89
SSH3-209ENST00000532600 SCP2P22307 547 aa20.62■□□□□ 0.89
SSH3-209ENST00000532600 NASPP49321 788 aaPredicted RBP20.62■□□□□ 0.89
SSH3-209ENST00000532600 UVSSAQ2YD98 709 aa20.62■□□□□ 0.89
SSH3-209ENST00000532600 ZNF461Q8TAF7 563 aa20.62■□□□□ 0.89
SSH3-209ENST00000532600 DDX12PQ92771 950 aa20.62■□□□□ 0.89
SSH3-209ENST00000532600 KIF12Q96FN5 646 aa20.62■□□□□ 0.89
SSH3-209ENST00000532600 RPP25Q9BUL9 199 aaKnown RBP20.62■□□□□ 0.89
SSH3-209ENST00000532600 STK17AQ9UEE5 414 aa20.62■□□□□ 0.89
SSH3-209ENST00000532600 NUB1Q9Y5A7 615 aa20.62■□□□□ 0.89
SSH3-209ENST00000532600 MCM4P33991 863 aa20.61■□□□□ 0.89
SSH3-209ENST00000532600 AARSP49588 968 aaKnown RBP eCLIP20.61■□□□□ 0.89
SSH3-209ENST00000532600 DNM1Q05193 864 aaKnown RBP20.61■□□□□ 0.89
SSH3-209ENST00000532600 KCNA1Q09470 495 aa20.61■□□□□ 0.89
SSH3-209ENST00000532600 RRAGBQ5VZM2 374 aa20.61■□□□□ 0.89
SSH3-209ENST00000532600 ZNF720Q7Z2F6 126 aa20.61■□□□□ 0.89
SSH3-209ENST00000532600 ALYREFQ86V81 257 aaKnown RBP20.61■□□□□ 0.89
SSH3-209ENST00000532600 MSTO1Q9BUK6 570 aa20.61■□□□□ 0.89
SSH3-209ENST00000532600 PCDHB8Q9UN66 801 aa20.61■□□□□ 0.89
SSH3-209ENST00000532600 POLIQ9UNA4 740 aa20.61■□□□□ 0.89
SSH3-209ENST00000532600 STYXL1Q9Y6J8 313 aa20.61■□□□□ 0.89
SSH3-209ENST00000532600 CACNA1HO95180 2353 aa20.6■□□□□ 0.89
SSH3-209ENST00000532600 ARHGEF37A1IGU5 675 aa20.6■□□□□ 0.89
SSH3-209ENST00000532600 M0QZQ0 153 aa20.6■□□□□ 0.89
SSH3-209ENST00000532600 NRG2O14511 850 aaPredicted RBP20.6■□□□□ 0.89
SSH3-209ENST00000532600 CYP3A5P20815 502 aa20.6■□□□□ 0.89
SSH3-209ENST00000532600 ADSSP30520 456 aa20.6■□□□□ 0.89
SSH3-209ENST00000532600 ARPP19P56211 112 aa20.6■□□□□ 0.89
SSH3-209ENST00000532600 PPP2R3AQ06190 1150 aa20.6■□□□□ 0.89
SSH3-209ENST00000532600 PARM1Q6UWI2 310 aa20.6■□□□□ 0.89
SSH3-209ENST00000532600 LINC00301Q8NCQ3 95 aa20.6■□□□□ 0.89
SSH3-209ENST00000532600 FGF13Q92913 245 aa20.6■□□□□ 0.89
SSH3-209ENST00000532600 FGF14Q92915 247 aa20.6■□□□□ 0.89
SSH3-209ENST00000532600 FGFBP2Q9BYJ0 223 aa20.6■□□□□ 0.89
SSH3-209ENST00000532600 PANK2Q9BZ23 570 aa20.6■□□□□ 0.89
SSH3-209ENST00000532600 CCDC39Q9UFE4 941 aa20.6■□□□□ 0.89
SSH3-209ENST00000532600 CDH7Q9ULB5 785 aa20.6■□□□□ 0.89
SSH3-209ENST00000532600 UBQLN1Q9UMX0 589 aaKnown RBP20.6■□□□□ 0.89
SSH3-209ENST00000532600 NUMBLQ9Y6R0 609 aa20.6■□□□□ 0.89
SSH3-209ENST00000532600 KRBA1A5PL33 1030 aa20.59■□□□□ 0.89
SSH3-209ENST00000532600 PI15O43692 258 aa20.59■□□□□ 0.89
SSH3-209ENST00000532600 XYLBO75191 536 aa20.59■□□□□ 0.89
SSH3-209ENST00000532600 VNN2O95498 520 aa20.59■□□□□ 0.89
SSH3-209ENST00000532600 NFICP08651 508 aa20.59■□□□□ 0.89
SSH3-209ENST00000532600 ATF2P15336 505 aa20.59■□□□□ 0.89
SSH3-209ENST00000532600 ACOT2P49753 483 aa20.59■□□□□ 0.89
SSH3-209ENST00000532600 SLC5A9Q2M3M2 681 aa20.59■□□□□ 0.89
SSH3-209ENST00000532600 CTXN3Q4LDR2 81 aa20.59■□□□□ 0.89
SSH3-209ENST00000532600 ASTLQ6HA08 431 aaPredicted RBP20.59■□□□□ 0.89
SSH3-209ENST00000532600 JADE1Q6IE81 842 aa20.59■□□□□ 0.89
SSH3-209ENST00000532600 CRELD2Q6UXH1 353 aaPredicted RBP20.59■□□□□ 0.89
SSH3-209ENST00000532600 RTL10Q7L3V2 364 aa20.59■□□□□ 0.89
SSH3-209ENST00000532600 SIX5Q8N196 739 aa20.59■□□□□ 0.89
SSH3-209ENST00000532600 KRI1Q8N9T8 703 aaKnown RBP20.59■□□□□ 0.89
SSH3-209ENST00000532600 ZNF396Q96N95 335 aaPredicted RBP20.59■□□□□ 0.89
SSH3-209ENST00000532600 RPF1Q9H9Y2 349 aaKnown RBP20.59■□□□□ 0.89
SSH3-209ENST00000532600 TIMM13Q9Y5L4 95 aaPredicted RBP20.59■□□□□ 0.89
SSH3-209ENST00000532600 COL4A3Q01955 1670 aa20.58■□□□□ 0.89
SSH3-209ENST00000532600 TSC2P49815 1807 aa20.58■□□□□ 0.89
SSH3-209ENST00000532600 H7C4K7 107 aa20.58■□□□□ 0.89
SSH3-209ENST00000532600 CFHP08603 1231 aa20.58■□□□□ 0.89
SSH3-209ENST00000532600 CASP5P51878 434 aa20.58■□□□□ 0.89
SSH3-209ENST00000532600 PTPN5P54829 565 aa20.58■□□□□ 0.89
SSH3-209ENST00000532600 NUCB2P80303 420 aa20.58■□□□□ 0.89
SSH3-209ENST00000532600 KYAT1Q16773 422 aa20.58■□□□□ 0.89
SSH3-209ENST00000532600 SPATA1Q5VX52 437 aa20.58■□□□□ 0.89
SSH3-209ENST00000532600 SV2BQ7L1I2 683 aa20.58■□□□□ 0.89
SSH3-209ENST00000532600 NPAS3Q8IXF0 933 aa20.58■□□□□ 0.89
SSH3-209ENST00000532600 TCEAL8Q8IYN2 117 aa20.58■□□□□ 0.89
SSH3-209ENST00000532600 ZSWIM2Q8NEG5 633 aa20.58■□□□□ 0.89
SSH3-209ENST00000532600 NXPE3Q969Y0 559 aa20.58■□□□□ 0.89
SSH3-209ENST00000532600 TBC1D7Q9P0N9 293 aa20.58■□□□□ 0.89
SSH3-209ENST00000532600 FRMD3A2A2Y4 597 aa20.57■□□□□ 0.88
SSH3-209ENST00000532600 SPTLC1O15269 473 aa20.57■□□□□ 0.88
SSH3-209ENST00000532600 OAZ2O95190 189 aa20.57■□□□□ 0.88
SSH3-209ENST00000532600 SRFP11831 508 aa20.57■□□□□ 0.88
SSH3-209ENST00000532600 MRE11P49959 708 aa20.57■□□□□ 0.88
SSH3-209ENST00000532600 WNT7BP56706 349 aa20.57■□□□□ 0.88
SSH3-209ENST00000532600 PABPC1LQ4VXU2 614 aaKnown RBP20.57■□□□□ 0.88
SSH3-209ENST00000532600 ZNF280DQ6N043 979 aa20.57■□□□□ 0.88
SSH3-209ENST00000532600 ING5Q8WYH8 240 aa20.57■□□□□ 0.88
SSH3-209ENST00000532600 IPO9Q96P70 1041 aaKnown RBP20.57■□□□□ 0.88
SSH3-209ENST00000532600 PRRX2Q99811 253 aa20.57■□□□□ 0.88
SSH3-209ENST00000532600 WNT16Q9UBV4 365 aa20.57■□□□□ 0.88
SSH3-209ENST00000532600 INSL5Q9Y5Q6 135 aa20.57■□□□□ 0.88
SSH3-209ENST00000532600 ZFP37Q9Y6Q3 630 aaPredicted RBP20.57■□□□□ 0.88
SSH3-209ENST00000532600 GALR2O43603 387 aaPredicted RBP20.56■□□□□ 0.88
SSH3-209ENST00000532600 RHOP08100 348 aa20.56■□□□□ 0.88
SSH3-209ENST00000532600 OR4Q2P0C623 313 aa20.56■□□□□ 0.88
SSH3-209ENST00000532600 CLCN5P51795 746 aa20.56■□□□□ 0.88
SSH3-209ENST00000532600 PRSS36Q5K4E3 855 aa20.56■□□□□ 0.88
SSH3-209ENST00000532600 C9orf57Q5W0N0 161 aa20.56■□□□□ 0.88
SSH3-209ENST00000532600 ADALQ6DHV7 355 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms