RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 ME1P48163 572 aa18.72■□□□□ 0.59
PHRF1-204ENST00000532550 ARPP19P56211 112 aa18.72■□□□□ 0.59
PHRF1-204ENST00000532550 L1TD1Q5T7N2 865 aaKnown RBP18.72■□□□□ 0.59
PHRF1-204ENST00000532550 RTL10Q7L3V2 364 aa18.72■□□□□ 0.59
PHRF1-204ENST00000532550 SYCP3Q8IZU3 236 aa18.72■□□□□ 0.59
PHRF1-204ENST00000532550 BEST2Q8NFU1 509 aa18.72■□□□□ 0.59
PHRF1-204ENST00000532550 ZNF461Q8TAF7 563 aa18.72■□□□□ 0.59
PHRF1-204ENST00000532550 SLC7A14Q8TBB6 771 aa18.72■□□□□ 0.59
PHRF1-204ENST00000532550 TNMDQ9H2S6 317 aa18.72■□□□□ 0.59
PHRF1-204ENST00000532550 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP18.72■□□□□ 0.59
PHRF1-204ENST00000532550 POLIQ9UNA4 740 aa18.72■□□□□ 0.59
PHRF1-204ENST00000532550 ARIH1Q9Y4X5 557 aaPredicted RBP18.72■□□□□ 0.59
PHRF1-204ENST00000532550 DENND4AQ7Z401 1863 aa18.71■□□□□ 0.59
PHRF1-204ENST00000532550 DOCK6Q96HP0 2047 aa18.71■□□□□ 0.59
PHRF1-204ENST00000532550 FRMD3A2A2Y4 597 aa18.71■□□□□ 0.59
PHRF1-204ENST00000532550 TISP43B9A030 160 aa18.71■□□□□ 0.59
PHRF1-204ENST00000532550 CCL16O15467 120 aa18.71■□□□□ 0.59
PHRF1-204ENST00000532550 HOXA9P31269 272 aa18.71■□□□□ 0.59
PHRF1-204ENST00000532550 ALCAMQ13740 583 aa18.71■□□□□ 0.59
PHRF1-204ENST00000532550 MRPL58Q14197 206 aaKnown RBP18.71■□□□□ 0.59
PHRF1-204ENST00000532550 CTXN3Q4LDR2 81 aa18.71■□□□□ 0.59
PHRF1-204ENST00000532550 SPATA1Q5VX52 437 aa18.71■□□□□ 0.59
PHRF1-204ENST00000532550 JADE1Q6IE81 842 aa18.71■□□□□ 0.59
PHRF1-204ENST00000532550 SLC8B1Q6J4K2 584 aa18.71■□□□□ 0.59
PHRF1-204ENST00000532550 SHC4Q6S5L8 630 aa18.71■□□□□ 0.59
PHRF1-204ENST00000532550 DSTYKQ6XUX3 929 aa18.71■□□□□ 0.59
PHRF1-204ENST00000532550 GRASPQ7Z6J2 395 aaPredicted RBP18.71■□□□□ 0.59
PHRF1-204ENST00000532550 DHX58Q96C10 678 aa18.71■□□□□ 0.59
PHRF1-204ENST00000532550 ASB7Q9H672 318 aa18.71■□□□□ 0.59
PHRF1-204ENST00000532550 FAM13BQ9NYF5 915 aa18.71■□□□□ 0.59
PHRF1-204ENST00000532550 IGSF9Q9P2J2 1179 aa18.71■□□□□ 0.59
PHRF1-204ENST00000532550 PCDHB8Q9UN66 801 aa18.71■□□□□ 0.59
PHRF1-204ENST00000532550 DERAQ9Y315 318 aa18.71■□□□□ 0.59
PHRF1-204ENST00000532550 FSHRP23945 695 aa18.7■□□□□ 0.58
PHRF1-204ENST00000532550 POU5F1Q01860 360 aaKnown RBP18.7■□□□□ 0.58
PHRF1-204ENST00000532550 ROR1Q01973 937 aa18.7■□□□□ 0.58
PHRF1-204ENST00000532550 KCNA1Q09470 495 aa18.7■□□□□ 0.58
PHRF1-204ENST00000532550 PKP1Q13835 747 aa18.7■□□□□ 0.58
PHRF1-204ENST00000532550 TMEM132DQ14C87 1099 aa18.7■□□□□ 0.58
PHRF1-204ENST00000532550 E2F4Q16254 413 aa18.7■□□□□ 0.58
PHRF1-204ENST00000532550 ZNF280DQ6N043 979 aa18.7■□□□□ 0.58
PHRF1-204ENST00000532550 SUGP1Q8IWZ8 645 aaKnown RBP18.7■□□□□ 0.58
PHRF1-204ENST00000532550 IKZF4Q9H2S9 585 aa18.7■□□□□ 0.58
PHRF1-204ENST00000532550 TMEM206Q9H813 350 aa18.7■□□□□ 0.58
PHRF1-204ENST00000532550 KCNK12Q9HB15 430 aa18.7■□□□□ 0.58
PHRF1-204ENST00000532550 KBTBD4Q9NVX7 518 aa18.7■□□□□ 0.58
PHRF1-204ENST00000532550 FBXL5Q9UKA1 691 aa18.7■□□□□ 0.58
PHRF1-204ENST00000532550 PCDHA7Q9UN72 937 aa18.7■□□□□ 0.58
PHRF1-204ENST00000532550 M0QZQ0 153 aa18.69■□□□□ 0.58
PHRF1-204ENST00000532550 TULP1O00294 542 aaPredicted RBP18.69■□□□□ 0.58
PHRF1-204ENST00000532550 PRRG1O14668 218 aa18.69■□□□□ 0.58
PHRF1-204ENST00000532550 POLR2DO15514 142 aaKnown RBP18.69■□□□□ 0.58
PHRF1-204ENST00000532550 TBC1D4O60343 1298 aa18.69■□□□□ 0.58
PHRF1-204ENST00000532550 N4BP1O75113 896 aaKnown RBP18.69■□□□□ 0.58
PHRF1-204ENST00000532550 ABLIM3O94929 683 aa18.69■□□□□ 0.58
PHRF1-204ENST00000532550 LDHAP00338 332 aaKnown RBP18.69■□□□□ 0.58
PHRF1-204ENST00000532550 PAX3P23760 479 aa18.69■□□□□ 0.58
PHRF1-204ENST00000532550 ADSSP30520 456 aa18.69■□□□□ 0.58
PHRF1-204ENST00000532550 GUCY2FP51841 1108 aa18.69■□□□□ 0.58
PHRF1-204ENST00000532550 DNM1Q05193 864 aaKnown RBP18.69■□□□□ 0.58
PHRF1-204ENST00000532550 TDGQ13569 410 aa18.69■□□□□ 0.58
PHRF1-204ENST00000532550 STXBP4Q6ZWJ1 553 aa18.69■□□□□ 0.58
PHRF1-204ENST00000532550 GET4Q7L5D6 327 aaPredicted RBP18.69■□□□□ 0.58
PHRF1-204ENST00000532550 USP37Q86T82 979 aa18.69■□□□□ 0.58
PHRF1-204ENST00000532550 TMEM130Q8N3G9 435 aa18.69■□□□□ 0.58
PHRF1-204ENST00000532550 FBXL6Q8N531 539 aa18.69■□□□□ 0.58
PHRF1-204ENST00000532550 ASIC4Q96FT7 647 aa18.69■□□□□ 0.58
PHRF1-204ENST00000532550 MYADMQ96S97 322 aa18.69■□□□□ 0.58
PHRF1-204ENST00000532550 EPS15L1Q9UBC2 864 aa18.69■□□□□ 0.58
PHRF1-204ENST00000532550 RCOR1Q9UKL0 485 aa18.69■□□□□ 0.58
PHRF1-204ENST00000532550 WDR27A2RRH5 827 aa18.68■□□□□ 0.58
PHRF1-204ENST00000532550 PRPF6O94906 941 aaKnown RBP18.68■□□□□ 0.58
PHRF1-204ENST00000532550 LRG1P02750 347 aa18.68■□□□□ 0.58
PHRF1-204ENST00000532550 LAMP2P13473 410 aa18.68■□□□□ 0.58
PHRF1-204ENST00000532550 ATF2P15336 505 aa18.68■□□□□ 0.58
PHRF1-204ENST00000532550 CASP5P51878 434 aa18.68■□□□□ 0.58
PHRF1-204ENST00000532550 YWHAHQ04917 246 aaPredicted RBP18.68■□□□□ 0.58
PHRF1-204ENST00000532550 TPGS2Q68CL5 300 aa18.68■□□□□ 0.58
PHRF1-204ENST00000532550 FAM122AQ96E09 287 aa18.68■□□□□ 0.58
PHRF1-204ENST00000532550 OXCT2Q9BYC2 517 aaPredicted RBP18.68■□□□□ 0.58
PHRF1-204ENST00000532550 TRIM9Q9C026 710 aa18.68■□□□□ 0.58
PHRF1-204ENST00000532550 CYP4F11Q9HBI6 524 aa18.68■□□□□ 0.58
PHRF1-204ENST00000532550 C2CD2Q9Y426 696 aa18.68■□□□□ 0.58
PHRF1-204ENST00000532550 TIMM13Q9Y5L4 95 aaPredicted RBP18.68■□□□□ 0.58
PHRF1-204ENST00000532550 ZFP37Q9Y6Q3 630 aaPredicted RBP18.68■□□□□ 0.58
PHRF1-204ENST00000532550 ZDBF2Q9HCK1 2354 aa18.67■□□□□ 0.58
PHRF1-204ENST00000532550 OAZ2O95190 189 aa18.67■□□□□ 0.58
PHRF1-204ENST00000532550 IL18RAPO95256 599 aa18.67■□□□□ 0.58
PHRF1-204ENST00000532550 NFICP08651 508 aa18.67■□□□□ 0.58
PHRF1-204ENST00000532550 POU2F2P09086 479 aa18.67■□□□□ 0.58
PHRF1-204ENST00000532550 GARTP22102 1010 aa18.67■□□□□ 0.58
PHRF1-204ENST00000532550 AARSP49588 968 aaKnown RBP eCLIP18.67■□□□□ 0.58
PHRF1-204ENST00000532550 LILRA4P59901 499 aa18.67■□□□□ 0.58
PHRF1-204ENST00000532550 ASIC1P78348 528 aa18.67■□□□□ 0.58
PHRF1-204ENST00000532550 NTHL1P78549 312 aa18.67■□□□□ 0.58
PHRF1-204ENST00000532550 C9orf57Q5W0N0 161 aa18.67■□□□□ 0.58
PHRF1-204ENST00000532550 CRELD2Q6UXH1 353 aaPredicted RBP18.67■□□□□ 0.58
PHRF1-204ENST00000532550 NXPE3Q969Y0 559 aa18.67■□□□□ 0.58
PHRF1-204ENST00000532550 PYM1Q9BRP8 204 aaKnown RBP18.67■□□□□ 0.58
PHRF1-204ENST00000532550 FAM213AQ9BRX8 229 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms