RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 RPL10AP62906 217 aaKnown RBP11.92□□□□□ -0.5
PTPRK-221ENST00000532331 AMPD2Q01433 879 aa11.92□□□□□ -0.5
PTPRK-221ENST00000532331 IL31Q6EBC2 164 aa11.92□□□□□ -0.5
PTPRK-221ENST00000532331 RBBP8NLQ8NC74 664 aaPredicted RBP11.92□□□□□ -0.5
PTPRK-221ENST00000532331 CPB2Q96IY4 423 aa11.92□□□□□ -0.5
PTPRK-221ENST00000532331 L3MBTL3Q96JM7 780 aaPredicted RBP11.92□□□□□ -0.5
PTPRK-221ENST00000532331 FDXACB1Q9BRP7 624 aaPredicted RBP11.92□□□□□ -0.5
PTPRK-221ENST00000532331 SYNPO2Q9UMS6 1093 aa11.92□□□□□ -0.5
PTPRK-221ENST00000532331 GAKO14976 1311 aa11.92□□□□□ -0.5
PTPRK-221ENST00000532331 HMGB1P1B2RPK0 211 aaPredicted RBP11.92□□□□□ -0.5
PTPRK-221ENST00000532331 SLC37A4O43826 429 aa11.92□□□□□ -0.5
PTPRK-221ENST00000532331 ZNF189O75820 626 aaPredicted RBP11.92□□□□□ -0.5
PTPRK-221ENST00000532331 TAC1P20366 129 aa11.92□□□□□ -0.5
PTPRK-221ENST00000532331 CASP8Q14790 479 aa11.92□□□□□ -0.5
PTPRK-221ENST00000532331 ARID5BQ14865 1188 aa11.92□□□□□ -0.5
PTPRK-221ENST00000532331 ANKRD40Q6AI12 368 aa11.92□□□□□ -0.5
PTPRK-221ENST00000532331 NECAB2Q7Z6G3 386 aa11.92□□□□□ -0.5
PTPRK-221ENST00000532331 NR1D1P20393 614 aa11.92□□□□□ -0.5
PTPRK-221ENST00000532331 GTF2H3Q13889 308 aa11.92□□□□□ -0.5
PTPRK-221ENST00000532331 Q4G0T1 1027 aa11.92□□□□□ -0.5
PTPRK-221ENST00000532331 REPS2Q8NFH8 660 aa11.92□□□□□ -0.5
PTPRK-221ENST00000532331 DEFB118Q96PH6 123 aa11.92□□□□□ -0.5
PTPRK-221ENST00000532331 RIOX1Q9H6W3 641 aa11.92□□□□□ -0.5
PTPRK-221ENST00000532331 ABCB6Q9NP58 842 aa11.92□□□□□ -0.5
PTPRK-221ENST00000532331 SNX24Q9Y343 169 aa11.92□□□□□ -0.5
PTPRK-221ENST00000532331 IPPQ9Y573 584 aa11.92□□□□□ -0.5
PTPRK-221ENST00000532331 TRPV2Q9Y5S1 764 aa11.92□□□□□ -0.5
PTPRK-221ENST00000532331 MROH7Q68CQ1 1323 aa11.92□□□□□ -0.5
PTPRK-221ENST00000532331 POLR1AO95602 1720 aaPredicted RBP11.92□□□□□ -0.5
PTPRK-221ENST00000532331 A0A1W2PQC6 194 aa11.92□□□□□ -0.5
PTPRK-221ENST00000532331 TCRBV5S4A2TA0A5A2 114 aa11.92□□□□□ -0.5
PTPRK-221ENST00000532331 OPHN1O60890 802 aa11.92□□□□□ -0.5
PTPRK-221ENST00000532331 TRIM67Q6ZTA4 783 aa11.92□□□□□ -0.5
PTPRK-221ENST00000532331 CDKL3Q8IVW4 592 aaPredicted RBP11.92□□□□□ -0.5
PTPRK-221ENST00000532331 CERS5Q8N5B7 392 aa11.92□□□□□ -0.5
PTPRK-221ENST00000532331 SYT2Q8N9I0 419 aaPredicted RBP11.92□□□□□ -0.5
PTPRK-221ENST00000532331 NIF3L1Q9GZT8 377 aa11.92□□□□□ -0.5
PTPRK-221ENST00000532331 IGFLR1Q9H665 355 aa11.92□□□□□ -0.5
PTPRK-221ENST00000532331 NMRK2Q9NPI5 230 aa11.92□□□□□ -0.5
PTPRK-221ENST00000532331 NOP14P78316 857 aaKnown RBP11.91□□□□□ -0.5
PTPRK-221ENST00000532331 ZNF467Q7Z7K2 595 aaPredicted RBP11.91□□□□□ -0.5
PTPRK-221ENST00000532331 PDZD8Q8NEN9 1154 aa11.91□□□□□ -0.5
PTPRK-221ENST00000532331 SH3KBP1Q96B97 665 aa11.91□□□□□ -0.5
PTPRK-221ENST00000532331 RNF25Q96BH1 459 aaPredicted RBP11.91□□□□□ -0.5
PTPRK-221ENST00000532331 DDX27Q96GQ7 796 aaKnown RBP11.91□□□□□ -0.5
PTPRK-221ENST00000532331 A1CFQ9NQ94 594 aaKnown RBP11.91□□□□□ -0.5
PTPRK-221ENST00000532331 PPP1R12AO14974 1030 aaPredicted RBP11.91□□□□□ -0.5
PTPRK-221ENST00000532331 CDH6P55285 790 aa11.91□□□□□ -0.5
PTPRK-221ENST00000532331 TRIM68Q6AZZ1 485 aa11.91□□□□□ -0.5
PTPRK-221ENST00000532331 PBXIP1Q96AQ6 731 aa11.91□□□□□ -0.5
PTPRK-221ENST00000532331 CLMNQ96JQ2 1002 aa11.91□□□□□ -0.5
PTPRK-221ENST00000532331 WDR18Q9BV38 432 aa11.91□□□□□ -0.5
PTPRK-221ENST00000532331 TMEM8AQ9HCN3 771 aa11.91□□□□□ -0.5
PTPRK-221ENST00000532331 WDR91A4D1P6 747 aa11.91□□□□□ -0.5
PTPRK-221ENST00000532331 CARNS1A5YM72 827 aa11.91□□□□□ -0.5
PTPRK-221ENST00000532331 TAS2R42Q7RTR8 314 aa11.91□□□□□ -0.5
PTPRK-221ENST00000532331 CKMP06732 381 aa11.91□□□□□ -0.5
PTPRK-221ENST00000532331 MBL2P11226 248 aaPredicted RBP11.91□□□□□ -0.5
PTPRK-221ENST00000532331 FMO5P49326 533 aa11.91□□□□□ -0.5
PTPRK-221ENST00000532331 CLCN6P51797 869 aa11.91□□□□□ -0.5
PTPRK-221ENST00000532331 GOLGA7BQ2TAP0 167 aa11.91□□□□□ -0.5
PTPRK-221ENST00000532331 ANKRD23Q86SG2 305 aa11.91□□□□□ -0.5
PTPRK-221ENST00000532331 ITIH5Q86UX2 942 aa11.91□□□□□ -0.5
PTPRK-221ENST00000532331 RAB42Q8N4Z0 105 aa11.91□□□□□ -0.5
PTPRK-221ENST00000532331 UBE2Q2Q8WVN8 375 aa11.91□□□□□ -0.5
PTPRK-221ENST00000532331 EDEM3Q9BZQ6 932 aa11.91□□□□□ -0.5
PTPRK-221ENST00000532331 E5RI56 91 aa11.9□□□□□ -0.5
PTPRK-221ENST00000532331 CYB561D2O14569 222 aa11.9□□□□□ -0.5
PTPRK-221ENST00000532331 GSTA4O15217 222 aa11.9□□□□□ -0.5
PTPRK-221ENST00000532331 KRT38O76015 456 aa11.9□□□□□ -0.5
PTPRK-221ENST00000532331 CHSY1Q86X52 802 aa11.9□□□□□ -0.5
PTPRK-221ENST00000532331 DCUN1D1Q96GG9 259 aa11.9□□□□□ -0.5
PTPRK-221ENST00000532331 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.9□□□□□ -0.51e-12■■■□□ 17.4
PTPRK-221ENST00000532331 APEX2Q9UBZ4 518 aa11.9□□□□□ -0.5
PTPRK-221ENST00000532331 TTC26A0AVF1 554 aa11.9□□□□□ -0.5
PTPRK-221ENST00000532331 TTLL13PA6NNM8 815 aa11.9□□□□□ -0.5
PTPRK-221ENST00000532331 GNGT2O14610 69 aa11.9□□□□□ -0.5
PTPRK-221ENST00000532331 PGK1P00558 417 aa11.9□□□□□ -0.5
PTPRK-221ENST00000532331 ZBTB48P10074 688 aaPredicted RBP11.9□□□□□ -0.5
PTPRK-221ENST00000532331 FLT3LGP49771 235 aa11.9□□□□□ -0.5
PTPRK-221ENST00000532331 DEUP1Q05D60 604 aa11.9□□□□□ -0.5
PTPRK-221ENST00000532331 SNCBQ16143 134 aa11.9□□□□□ -0.5
PTPRK-221ENST00000532331 SCG3Q8WXD2 468 aaKnown RBP11.9□□□□□ -0.5
PTPRK-221ENST00000532331 EFHD1Q9BUP0 239 aa11.9□□□□□ -0.5
PTPRK-221ENST00000532331 WNT8AQ9H1J5 351 aa11.9□□□□□ -0.5
PTPRK-221ENST00000532331 OLA1Q9NTK5 396 aaKnown RBP11.9□□□□□ -0.5
PTPRK-221ENST00000532331 TXLNGQ9NUQ3 528 aa11.9□□□□□ -0.5
PTPRK-221ENST00000532331 HMGCRP04035 888 aa11.9□□□□□ -0.5
PTPRK-221ENST00000532331 WEE2P0C1S8 567 aa11.9□□□□□ -0.5
PTPRK-221ENST00000532331 PDGFRAP16234 1089 aa11.9□□□□□ -0.5
PTPRK-221ENST00000532331 GRK4P32298 578 aa11.9□□□□□ -0.5
PTPRK-221ENST00000532331 AVPR1AP37288 418 aa11.9□□□□□ -0.5
PTPRK-221ENST00000532331 LAMTOR4Q0VGL1 99 aa11.9□□□□□ -0.5
PTPRK-221ENST00000532331 ANKRD20A4Q4UJ75 823 aa11.9□□□□□ -0.5
PTPRK-221ENST00000532331 ANKRD20A8PQ5CZ79 823 aa11.9□□□□□ -0.5
PTPRK-221ENST00000532331 ANKRD20A2Q5SQ80 823 aa11.9□□□□□ -0.5
PTPRK-221ENST00000532331 PRAMEF19Q5SWL8 479 aa11.9□□□□□ -0.5
PTPRK-221ENST00000532331 ANKRD20A1Q5TYW2 823 aa11.9□□□□□ -0.5
PTPRK-221ENST00000532331 CXCL17Q6UXB2 119 aa11.9□□□□□ -0.5
PTPRK-221ENST00000532331 RHOT1Q8IXI2 618 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms