RNA–Protein interactions for RNA: ENST00000532313.5

CSRP1-215, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 5,239 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-215ENST00000532313 ZNF112Q9UJU3 913 aa12.32□□□□□ -0.44
CSRP1-215ENST00000532313 DDX41Q9UJV9 622 aaKnown RBP12.32□□□□□ -0.44
CSRP1-215ENST00000532313 TRIM66O15016 1216 aa12.32□□□□□ -0.44
CSRP1-215ENST00000532313 LGR5O75473 907 aa12.32□□□□□ -0.44
CSRP1-215ENST00000532313 LUC7L3O95232 432 aaKnown RBP12.32□□□□□ -0.44
CSRP1-215ENST00000532313 GRIK3Q13003 919 aa12.32□□□□□ -0.44
CSRP1-215ENST00000532313 DRAP1Q14919 205 aaPredicted RBP12.32□□□□□ -0.44
CSRP1-215ENST00000532313 DPCR1Q3MIW9 517 aa12.32□□□□□ -0.44
CSRP1-215ENST00000532313 DNAJC21Q5F1R6 531 aaKnown RBP12.32□□□□□ -0.44
CSRP1-215ENST00000532313 ADAT2Q7Z6V5 191 aaKnown RBP12.32□□□□□ -0.44
CSRP1-215ENST00000532313 TBC1D19Q8N5T2 526 aa12.32□□□□□ -0.44
CSRP1-215ENST00000532313 ZNF296Q8WUU4 475 aaPredicted RBP12.32□□□□□ -0.44
CSRP1-215ENST00000532313 UBLCP1Q8WVY7 318 aaPredicted RBP12.32□□□□□ -0.44
CSRP1-215ENST00000532313 SAMD11Q96NU1 681 aa12.32□□□□□ -0.44
CSRP1-215ENST00000532313 ELOVL4Q9GZR5 314 aa12.32□□□□□ -0.44
CSRP1-215ENST00000532313 SIK2Q9H0K1 926 aa12.32□□□□□ -0.44
CSRP1-215ENST00000532313 PCDHB2Q9Y5E7 798 aa12.32□□□□□ -0.44
CSRP1-215ENST00000532313 MAD1L1Q9Y6D9 718 aa12.32□□□□□ -0.44
CSRP1-215ENST00000532313 AP1G2O75843 785 aa12.31□□□□□ -0.44
CSRP1-215ENST00000532313 ADKP55263 362 aaKnown RBP12.31□□□□□ -0.44
CSRP1-215ENST00000532313 RBBP8NLQ8NC74 664 aaPredicted RBP12.31□□□□□ -0.44
CSRP1-215ENST00000532313 CCDC110Q8TBZ0 833 aa12.31□□□□□ -0.44
CSRP1-215ENST00000532313 GMLQ99445 158 aa12.31□□□□□ -0.44
CSRP1-215ENST00000532313 CPP00450 1065 aa12.31□□□□□ -0.44
CSRP1-215ENST00000532313 VDRP11473 427 aa12.31□□□□□ -0.44
CSRP1-215ENST00000532313 KRT31Q15323 416 aa12.31□□□□□ -0.44
CSRP1-215ENST00000532313 ATAT1Q5SQI0 421 aa12.31□□□□□ -0.44
CSRP1-215ENST00000532313 DSG4Q86SJ6 1040 aa12.31□□□□□ -0.44
CSRP1-215ENST00000532313 SMC6Q96SB8 1091 aa12.31□□□□□ -0.44
CSRP1-215ENST00000532313 C11orf70Q9BRQ4 267 aa12.31□□□□□ -0.44
CSRP1-215ENST00000532313 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.31□□□□□ -0.44
CSRP1-215ENST00000532313 MYMKA6NI61 221 aa12.31□□□□□ -0.44
CSRP1-215ENST00000532313 ARVCFO00192 962 aa12.31□□□□□ -0.44
CSRP1-215ENST00000532313 CDC25BP30305 580 aa12.31□□□□□ -0.44
CSRP1-215ENST00000532313 CASP14P31944 242 aa12.31□□□□□ -0.44
CSRP1-215ENST00000532313 RTP1P59025 263 aa12.31□□□□□ -0.44
CSRP1-215ENST00000532313 ZBTB16Q05516 673 aa12.31□□□□□ -0.44
CSRP1-215ENST00000532313 ZNF177Q13360 481 aaPredicted RBP12.31□□□□□ -0.44
CSRP1-215ENST00000532313 ARHGEF7Q14155 803 aa12.31□□□□□ -0.44
CSRP1-215ENST00000532313 SLC24A5Q71RS6 500 aa12.31□□□□□ -0.44
CSRP1-215ENST00000532313 OTOP1Q7RTM1 612 aa12.31□□□□□ -0.44
CSRP1-215ENST00000532313 SLC7A14Q8TBB6 771 aa12.31□□□□□ -0.44
CSRP1-215ENST00000532313 HSPH1Q92598 858 aa12.31□□□□□ -0.44
CSRP1-215ENST00000532313 PKNOX2Q96KN3 472 aa12.31□□□□□ -0.44
CSRP1-215ENST00000532313 APEX2Q9UBZ4 518 aa12.31□□□□□ -0.44
CSRP1-215ENST00000532313 ABHD14A-ACY1A0A1B0GW23 586 aa12.31□□□□□ -0.44
CSRP1-215ENST00000532313 CREB3O43889 395 aa12.31□□□□□ -0.44
CSRP1-215ENST00000532313 POMCP01189 267 aa12.31□□□□□ -0.44
CSRP1-215ENST00000532313 CHGBP05060 677 aa12.31□□□□□ -0.44
CSRP1-215ENST00000532313 ICAM3P32942 547 aa12.31□□□□□ -0.44
CSRP1-215ENST00000532313 FMO5P49326 533 aa12.31□□□□□ -0.44
CSRP1-215ENST00000532313 RARRES1P49788 294 aa12.31□□□□□ -0.44
CSRP1-215ENST00000532313 BCAT1P54687 386 aa12.31□□□□□ -0.44
CSRP1-215ENST00000532313 TRAPPC11Q7Z392 1133 aa12.31□□□□□ -0.44
CSRP1-215ENST00000532313 SENP2Q9HC62 589 aa12.31□□□□□ -0.44
CSRP1-215ENST00000532313 ANAPC7Q9UJX3 599 aa12.31□□□□□ -0.44
CSRP1-215ENST00000532313 MAFO75444 373 aaPredicted RBP12.3□□□□□ -0.44
CSRP1-215ENST00000532313 ZRANB2O95218 330 aaKnown RBP eCLIP12.3□□□□□ -0.44
CSRP1-215ENST00000532313 TRIM49P0CI25 452 aa12.3□□□□□ -0.44
CSRP1-215ENST00000532313 TRIM49CP0CI26 452 aa12.3□□□□□ -0.44
CSRP1-215ENST00000532313 SETSIPP0DME0 302 aa12.3□□□□□ -0.44
CSRP1-215ENST00000532313 SOX5P35711 763 aa12.3□□□□□ -0.44
CSRP1-215ENST00000532313 ACLYP53396 1101 aa12.3□□□□□ -0.44
CSRP1-215ENST00000532313 WHAMMP3Q1A5X7 153 aa12.3□□□□□ -0.44
CSRP1-215ENST00000532313 SLC45A4Q5BKX6 768 aa12.3□□□□□ -0.44
CSRP1-215ENST00000532313 BPIFA3Q9BQP9 254 aa12.3□□□□□ -0.44
CSRP1-215ENST00000532313 MID2Q9UJV3 735 aa12.3□□□□□ -0.44
CSRP1-215ENST00000532313 TLDC2A0PJX2 215 aa12.3□□□□□ -0.44
CSRP1-215ENST00000532313 FGRP09769 529 aa12.3□□□□□ -0.44
CSRP1-215ENST00000532313 DEUP1Q05D60 604 aa12.3□□□□□ -0.44
CSRP1-215ENST00000532313 TSTA3Q13630 321 aaPredicted RBP12.3□□□□□ -0.44
CSRP1-215ENST00000532313 PPP2R2DQ66LE6 453 aa12.3□□□□□ -0.44
CSRP1-215ENST00000532313 INPP4AQ96PE3 977 aaPredicted RBP12.3□□□□□ -0.44
CSRP1-215ENST00000532313 NUDCD1Q96RS6 583 aa12.3□□□□□ -0.44
CSRP1-215ENST00000532313 SLC7A5P2Q9GIP4 190 aa12.3□□□□□ -0.44
CSRP1-215ENST00000532313 PORCNQ9H237 461 aa12.3□□□□□ -0.44
CSRP1-215ENST00000532313 TMEM60Q9H2L4 133 aa12.3□□□□□ -0.44
CSRP1-215ENST00000532313 PLA2G4CQ9UP65 541 aa12.3□□□□□ -0.44
CSRP1-215ENST00000532313 F5H5T6 163 aa12.3□□□□□ -0.44
CSRP1-215ENST00000532313 KRT3P12035 628 aa12.3□□□□□ -0.44
CSRP1-215ENST00000532313 SYT10Q6XYQ8 523 aa12.3□□□□□ -0.44
CSRP1-215ENST00000532313 KLHL7Q8IXQ5 586 aa12.3□□□□□ -0.44
CSRP1-215ENST00000532313 STK33Q9BYT3 514 aa12.3□□□□□ -0.44
CSRP1-215ENST00000532313 TMEM117Q9H0C3 514 aa12.3□□□□□ -0.44
CSRP1-215ENST00000532313 ASAH2Q9NR71 780 aa12.3□□□□□ -0.44
CSRP1-215ENST00000532313 OLFML3Q9NRN5 406 aa12.3□□□□□ -0.44
CSRP1-215ENST00000532313 ZMYND8Q9ULU4 1186 aaPredicted RBP12.3□□□□□ -0.44
CSRP1-215ENST00000532313 PLIN4Q96Q06 1357 aa12.3□□□□□ -0.44
CSRP1-215ENST00000532313 MTSS1O43312 755 aa12.3□□□□□ -0.44
CSRP1-215ENST00000532313 IRF1P10914 325 aa12.3□□□□□ -0.44
CSRP1-215ENST00000532313 ARL4DP49703 201 aa12.3□□□□□ -0.44
CSRP1-215ENST00000532313 EIF2B5Q13144 721 aaKnown RBP12.3□□□□□ -0.44
CSRP1-215ENST00000532313 SEPT6Q14141 434 aa12.3□□□□□ -0.44
CSRP1-215ENST00000532313 POLD3Q15054 466 aaPredicted RBP12.3□□□□□ -0.44
CSRP1-215ENST00000532313 FMR1NBQ8N0W7 255 aaPredicted RBP12.3□□□□□ -0.44
CSRP1-215ENST00000532313 PDCD6IPQ8WUM4 868 aaKnown RBP12.3□□□□□ -0.44
CSRP1-215ENST00000532313 CRYBG1Q9Y4K1 1723 aa12.3□□□□□ -0.44
CSRP1-215ENST00000532313 GLUD1P00367 558 aa12.29□□□□□ -0.44
CSRP1-215ENST00000532313 SLC1A1P43005 524 aa12.29□□□□□ -0.44
CSRP1-215ENST00000532313 GLRA4Q5JXX5 417 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms