RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 P4HA2O15460 535 aa13.53□□□□□ -0.24
COPB1-208ENST00000532088 N4BP1O75113 896 aaKnown RBP13.53□□□□□ -0.24
COPB1-208ENST00000532088 THP07101 528 aa13.53□□□□□ -0.24
COPB1-208ENST00000532088 ATP2A2P16615 1042 aaKnown RBP13.53□□□□□ -0.24
COPB1-208ENST00000532088 PAX3P23760 479 aa13.53□□□□□ -0.24
COPB1-208ENST00000532088 MAN2A1Q16706 1144 aa13.53□□□□□ -0.24
COPB1-208ENST00000532088 DUOXA2Q1HG44 320 aa13.53□□□□□ -0.24
COPB1-208ENST00000532088 LUZP1Q86V48 1076 aa13.53□□□□□ -0.24
COPB1-208ENST00000532088 LRRC43Q8N309 656 aa13.53□□□□□ -0.24
COPB1-208ENST00000532088 RNF169Q8NCN4 708 aa13.53□□□□□ -0.24
COPB1-208ENST00000532088 SLC35C1Q96A29 364 aa13.53□□□□□ -0.24
COPB1-208ENST00000532088 EEF2KMTQ96G04 330 aa13.53□□□□□ -0.24
COPB1-208ENST00000532088 UROC1Q96N76 676 aa13.53□□□□□ -0.24
COPB1-208ENST00000532088 PDE11AQ9HCR9 933 aa13.53□□□□□ -0.24
COPB1-208ENST00000532088 INTS13Q9NVM9 706 aa13.53□□□□□ -0.24
COPB1-208ENST00000532088 CXXC1Q9P0U4 656 aaPredicted RBP13.53□□□□□ -0.24
COPB1-208ENST00000532088 INSL6Q9Y581 213 aa13.53□□□□□ -0.24
COPB1-208ENST00000532088 PDCD11Q14690 1871 aaKnown RBP13.53□□□□□ -0.24
COPB1-208ENST00000532088 A0A1W2PPC1 479 aa13.52□□□□□ -0.25
COPB1-208ENST00000532088 LRRIQ3A6PVS8 624 aaPredicted RBP13.52□□□□□ -0.25
COPB1-208ENST00000532088 S1PR4O95977 384 aa13.52□□□□□ -0.25
COPB1-208ENST00000532088 TPM2P07951 284 aa13.52□□□□□ -0.25
COPB1-208ENST00000532088 FGFR1P11362 822 aa13.52□□□□□ -0.25
COPB1-208ENST00000532088 DSC1Q08554 894 aa13.52□□□□□ -0.25
COPB1-208ENST00000532088 TMEM132DQ14C87 1099 aa13.52□□□□□ -0.25
COPB1-208ENST00000532088 SHHQ15465 462 aa13.52□□□□□ -0.25
COPB1-208ENST00000532088 NAB2Q15742 525 aa13.52□□□□□ -0.25
COPB1-208ENST00000532088 C9orf50Q5SZB4 431 aa13.52□□□□□ -0.25
COPB1-208ENST00000532088 JADE1Q6IE81 842 aa13.52□□□□□ -0.25
COPB1-208ENST00000532088 HERC6Q8IVU3 1022 aa13.52□□□□□ -0.25
COPB1-208ENST00000532088 EFCAB13Q8IY85 973 aa13.52□□□□□ -0.25
COPB1-208ENST00000532088 BEST2Q8NFU1 509 aa13.52□□□□□ -0.25
COPB1-208ENST00000532088 PLEKHO2Q8TD55 490 aa13.52□□□□□ -0.25
COPB1-208ENST00000532088 HELQQ8TDG4 1101 aa13.52□□□□□ -0.25
COPB1-208ENST00000532088 ANKRD36BP1Q96IX9 119 aa13.52□□□□□ -0.25
COPB1-208ENST00000532088 RNPC3Q96LT9 517 aaKnown RBP13.52□□□□□ -0.25
COPB1-208ENST00000532088 ZMAT2Q96NC0 199 aaKnown RBP13.52□□□□□ -0.25
COPB1-208ENST00000532088 PRO3102Q9H379 93 aa13.52□□□□□ -0.25
COPB1-208ENST00000532088 TMEM8AQ9HCN3 771 aa13.52□□□□□ -0.25
COPB1-208ENST00000532088 KLK14Q9P0G3 267 aa13.52□□□□□ -0.25
COPB1-208ENST00000532088 ITGA11Q9UKX5 1188 aa13.52□□□□□ -0.25
COPB1-208ENST00000532088 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.52□□□□□ -0.25
COPB1-208ENST00000532088 ANK1P16157 1881 aa13.52□□□□□ -0.25
COPB1-208ENST00000532088 PTPRSQ13332 1948 aa13.51□□□□□ -0.25
COPB1-208ENST00000532088 TNNC2P02585 160 aa13.51□□□□□ -0.25
COPB1-208ENST00000532088 C4BPAP04003 597 aaKnown RBP13.51□□□□□ -0.25
COPB1-208ENST00000532088 TMEM191BP0C7N4 346 aa13.51□□□□□ -0.25
COPB1-208ENST00000532088 DLATP10515 647 aaKnown RBP13.51□□□□□ -0.25
COPB1-208ENST00000532088 TNNI1P19237 187 aa13.51□□□□□ -0.25
COPB1-208ENST00000532088 CDK11BP21127 795 aaKnown RBP13.51□□□□□ -0.25
COPB1-208ENST00000532088 LRPAP1P30533 357 aa13.51□□□□□ -0.25
COPB1-208ENST00000532088 RPL9P32969 192 aaKnown RBP13.51□□□□□ -0.25
COPB1-208ENST00000532088 MTIF2P46199 727 aaKnown RBP13.51□□□□□ -0.25
COPB1-208ENST00000532088 SCNN1GP51170 649 aa13.51□□□□□ -0.25
COPB1-208ENST00000532088 WNT7BP56706 349 aa13.51□□□□□ -0.25
COPB1-208ENST00000532088 TUSC3Q13454 348 aa13.51□□□□□ -0.25
COPB1-208ENST00000532088 UVSSAQ2YD98 709 aa13.51□□□□□ -0.25
COPB1-208ENST00000532088 ZACNQ401N2 412 aa13.51□□□□□ -0.25
COPB1-208ENST00000532088 C1orf220Q5T0J3 134 aa13.51□□□□□ -0.25
COPB1-208ENST00000532088 C15orf39Q6ZRI6 1047 aa13.51□□□□□ -0.25
COPB1-208ENST00000532088 GAS2L3Q86XJ1 694 aa13.51□□□□□ -0.25
COPB1-208ENST00000532088 CCDC127Q96BQ5 260 aa13.51□□□□□ -0.25
COPB1-208ENST00000532088 ZFP42Q96MM3 310 aa13.51□□□□□ -0.25
COPB1-208ENST00000532088 RAD9AQ99638 391 aa13.51□□□□□ -0.25
COPB1-208ENST00000532088 TMEM175Q9BSA9 504 aa13.51□□□□□ -0.25
COPB1-208ENST00000532088 TUBGCP2Q9BSJ2 902 aa13.51□□□□□ -0.25
COPB1-208ENST00000532088 TBC1D13Q9NVG8 400 aa13.51□□□□□ -0.25
COPB1-208ENST00000532088 MIOSQ9NXC5 875 aa13.51□□□□□ -0.25
COPB1-208ENST00000532088 FNDC1Q4ZHG4 1894 aaPredicted RBP13.5□□□□□ -0.25
COPB1-208ENST00000532088 GTPBP10A4D1E9 387 aaKnown RBP13.5□□□□□ -0.25
COPB1-208ENST00000532088 TBKBP1A7MCY6 615 aa13.5□□□□□ -0.25
COPB1-208ENST00000532088 AP1G2O75843 785 aa13.5□□□□□ -0.25
COPB1-208ENST00000532088 UPP2O95045 317 aa13.5□□□□□ -0.25
COPB1-208ENST00000532088 STAU1O95793 577 aaKnown RBP13.5□□□□□ -0.25
COPB1-208ENST00000532088 AFPP02771 609 aaKnown RBP13.5□□□□□ -0.25
COPB1-208ENST00000532088 NFICP08651 508 aa13.5□□□□□ -0.25
COPB1-208ENST00000532088 DLG4P78352 724 aa13.5□□□□□ -0.25
COPB1-208ENST00000532088 KCNH2Q12809 1159 aa13.5□□□□□ -0.25
COPB1-208ENST00000532088 KRT31Q15323 416 aa13.5□□□□□ -0.25
COPB1-208ENST00000532088 VWA3BQ502W6 1294 aa13.5□□□□□ -0.25
COPB1-208ENST00000532088 DCAF17Q5H9S7 520 aaPredicted RBP13.5□□□□□ -0.25
COPB1-208ENST00000532088 TCERG1LQ5VWI1 586 aa13.5□□□□□ -0.25
COPB1-208ENST00000532088 KRT39Q6A163 491 aa13.5□□□□□ -0.25
COPB1-208ENST00000532088 LYPD8Q6UX82 237 aa13.5□□□□□ -0.25
COPB1-208ENST00000532088 TDHQ8IZJ6 230 aa13.5□□□□□ -0.25
COPB1-208ENST00000532088 YME1L1Q96TA2 773 aa13.5□□□□□ -0.25
COPB1-208ENST00000532088 RBSNQ9H1K0 784 aa13.5□□□□□ -0.25
COPB1-208ENST00000532088 INPP5FQ9Y2H2 1132 aa13.5□□□□□ -0.25
COPB1-208ENST00000532088 COQ4Q9Y3A0 265 aa13.5□□□□□ -0.25
COPB1-208ENST00000532088 PTPRJQ12913 1337 aa13.49□□□□□ -0.25
COPB1-208ENST00000532088 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.49□□□□□ -0.25
COPB1-208ENST00000532088 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.49□□□□□ -0.25
COPB1-208ENST00000532088 ANO9A1A5B4 782 aa13.49□□□□□ -0.25
COPB1-208ENST00000532088 TMEM189-UBE2V1I3L0A0 370 aa13.49□□□□□ -0.25
COPB1-208ENST00000532088 TRIM49P0CI25 452 aa13.49□□□□□ -0.25
COPB1-208ENST00000532088 TRIM49CP0CI26 452 aa13.49□□□□□ -0.25
COPB1-208ENST00000532088 ATICP31939 592 aa13.49□□□□□ -0.25
COPB1-208ENST00000532088 PNPLA4P41247 253 aa13.49□□□□□ -0.25
COPB1-208ENST00000532088 FMO5P49326 533 aa13.49□□□□□ -0.25
COPB1-208ENST00000532088 MXI1P50539 228 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms