RNA–Protein interactions for RNA: ENST00000532024.1

PPFIA1-220, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-220ENST00000532024 USP41Q3LFD5 358 aa12.77□□□□□ -0.37
PPFIA1-220ENST00000532024 ANO6Q4KMQ2 910 aa12.77□□□□□ -0.37
PPFIA1-220ENST00000532024 TIGD5Q53EQ6 642 aa12.77□□□□□ -0.37
PPFIA1-220ENST00000532024 C9orf57Q5W0N0 161 aa12.77□□□□□ -0.37
PPFIA1-220ENST00000532024 LMBRD2Q68DH5 695 aaPredicted RBP12.77□□□□□ -0.37
PPFIA1-220ENST00000532024 FUT10Q6P4F1 479 aa12.77□□□□□ -0.37
PPFIA1-220ENST00000532024 TMC7Q7Z402 723 aa12.77□□□□□ -0.37
PPFIA1-220ENST00000532024 SPRED2Q7Z698 418 aa12.77□□□□□ -0.37
PPFIA1-220ENST00000532024 LRRC52Q8N7C0 313 aa12.77□□□□□ -0.37
PPFIA1-220ENST00000532024 CCDC150Q8NCX0 1101 aa12.77□□□□□ -0.37
PPFIA1-220ENST00000532024 ANKRD20A12PQ8NF67 263 aa12.77□□□□□ -0.37
PPFIA1-220ENST00000532024 MICAL1Q8TDZ2 1067 aa12.77□□□□□ -0.37
PPFIA1-220ENST00000532024 HASPINQ8TF76 798 aa12.77□□□□□ -0.37
PPFIA1-220ENST00000532024 POF1BQ8WVV4 589 aa12.77□□□□□ -0.37
PPFIA1-220ENST00000532024 MRPL38Q96DV4 380 aaKnown RBP12.77□□□□□ -0.37
PPFIA1-220ENST00000532024 PAAF1Q9BRP4 392 aa12.77□□□□□ -0.37
PPFIA1-220ENST00000532024 DNAJC25Q9H1X3 360 aa12.77□□□□□ -0.37
PPFIA1-220ENST00000532024 NGRNQ9NPE2 291 aaKnown RBP12.77□□□□□ -0.37
PPFIA1-220ENST00000532024 MARCH5Q9NX47 278 aa12.77□□□□□ -0.37
PPFIA1-220ENST00000532024 LMCD1Q9NZU5 365 aa12.77□□□□□ -0.37
PPFIA1-220ENST00000532024 COL6A3P12111 3177 aa12.77□□□□□ -0.37
PPFIA1-220ENST00000532024 ANO9A1A5B4 782 aa12.76□□□□□ -0.37
PPFIA1-220ENST00000532024 FSD2A1L4K1 749 aa12.76□□□□□ -0.37
PPFIA1-220ENST00000532024 N4BP1O75113 896 aaKnown RBP12.76□□□□□ -0.37
PPFIA1-220ENST00000532024 SOD2P04179 222 aa12.76□□□□□ -0.37
PPFIA1-220ENST00000532024 TPM2P07951 284 aa12.76□□□□□ -0.37
PPFIA1-220ENST00000532024 ODC1P11926 461 aa12.76□□□□□ -0.37
PPFIA1-220ENST00000532024 POLR2BP30876 1174 aaKnown RBP12.76□□□□□ -0.37
PPFIA1-220ENST00000532024 CA8P35219 290 aa12.76□□□□□ -0.37
PPFIA1-220ENST00000532024 GLUD2P49448 558 aa12.76□□□□□ -0.37
PPFIA1-220ENST00000532024 MXI1P50539 228 aa12.76□□□□□ -0.37
PPFIA1-220ENST00000532024 GUCY2FP51841 1108 aa12.76□□□□□ -0.37
PPFIA1-220ENST00000532024 WNT7BP56706 349 aa12.76□□□□□ -0.37
PPFIA1-220ENST00000532024 TPM4P67936 248 aa12.76□□□□□ -0.37
PPFIA1-220ENST00000532024 SMC1AQ14683 1233 aaKnown RBP12.76□□□□□ -0.37
PPFIA1-220ENST00000532024 DSTYKQ6XUX3 929 aa12.76□□□□□ -0.37
PPFIA1-220ENST00000532024 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.76□□□□□ -0.37
PPFIA1-220ENST00000532024 TRAPPC11Q7Z392 1133 aa12.76□□□□□ -0.37
PPFIA1-220ENST00000532024 TMEM173Q86WV6 379 aaPredicted RBP12.76□□□□□ -0.37
PPFIA1-220ENST00000532024 VPS52Q8N1B4 723 aa12.76□□□□□ -0.37
PPFIA1-220ENST00000532024 C1orf127Q8N9H9 656 aa12.76□□□□□ -0.37
PPFIA1-220ENST00000532024 APPL2Q8NEU8 664 aa12.76□□□□□ -0.37
PPFIA1-220ENST00000532024 OR5B17Q8NGF7 314 aa12.76□□□□□ -0.37
PPFIA1-220ENST00000532024 ENOX1Q8TC92 643 aaKnown RBP12.76□□□□□ -0.37
PPFIA1-220ENST00000532024 SPPL3Q8TCT6 385 aa12.76□□□□□ -0.37
PPFIA1-220ENST00000532024 RABGGTAQ92696 567 aa12.76□□□□□ -0.37
PPFIA1-220ENST00000532024 CNOT6LQ96LI5 555 aaKnown RBP12.76□□□□□ -0.37
PPFIA1-220ENST00000532024 POP1Q99575 1024 aaKnown RBP12.76□□□□□ -0.37
PPFIA1-220ENST00000532024 TCF25Q9BQ70 676 aa12.76□□□□□ -0.37
PPFIA1-220ENST00000532024 HERC2P3Q9BVR0 1158 aa12.76□□□□□ -0.37
PPFIA1-220ENST00000532024 CACNG4Q9UBN1 327 aa12.76□□□□□ -0.37
PPFIA1-220ENST00000532024 AGAP1Q9UPQ3 857 aa12.76□□□□□ -0.37
PPFIA1-220ENST00000532024 NFE2L3Q9Y4A8 694 aa12.76□□□□□ -0.37
PPFIA1-220ENST00000532024 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.76□□□□□ -0.37
PPFIA1-220ENST00000532024 PTPRJQ12913 1337 aa12.76□□□□□ -0.37
PPFIA1-220ENST00000532024 TRANK1O15050 2925 aa12.76□□□□□ -0.37
PPFIA1-220ENST00000532024 SMTNL1A8MU46 457 aa12.75□□□□□ -0.37
PPFIA1-220ENST00000532024 BECN2A8MW95 431 aa12.75□□□□□ -0.37
PPFIA1-220ENST00000532024 PIRO00625 290 aa12.75□□□□□ -0.37
PPFIA1-220ENST00000532024 SYN3O14994 580 aa12.75□□□□□ -0.37
PPFIA1-220ENST00000532024 GRM6O15303 877 aa12.75□□□□□ -0.37
PPFIA1-220ENST00000532024 TRIM49P0CI25 452 aa12.75□□□□□ -0.37
PPFIA1-220ENST00000532024 TRIM49CP0CI26 452 aa12.75□□□□□ -0.37
PPFIA1-220ENST00000532024 P4HA1P13674 534 aa12.75□□□□□ -0.37
PPFIA1-220ENST00000532024 PRKCSHP14314 528 aaPredicted RBP12.75□□□□□ -0.37
PPFIA1-220ENST00000532024 IGFBP4P22692 258 aa12.75□□□□□ -0.37
PPFIA1-220ENST00000532024 ATICP31939 592 aa12.75□□□□□ -0.37
PPFIA1-220ENST00000532024 PIK3CAP42336 1068 aa12.75□□□□□ -0.37
PPFIA1-220ENST00000532024 MTIF2P46199 727 aaKnown RBP12.75□□□□□ -0.37
PPFIA1-220ENST00000532024 ZNF165P49910 485 aa12.75□□□□□ -0.37
PPFIA1-220ENST00000532024 MARSP56192 900 aaKnown RBP12.75□□□□□ -0.37
PPFIA1-220ENST00000532024 FAM171A1Q5VUB5 890 aa12.75□□□□□ -0.37
PPFIA1-220ENST00000532024 KRT39Q6A163 491 aa12.75□□□□□ -0.37
PPFIA1-220ENST00000532024 C11orf57Q6ZUT1 292 aaPredicted RBP12.75□□□□□ -0.37
PPFIA1-220ENST00000532024 Q7L0L9 218 aa12.75□□□□□ -0.37
PPFIA1-220ENST00000532024 CREBRFQ8IUR6 639 aa12.75□□□□□ -0.37
PPFIA1-220ENST00000532024 GPR65Q8IYL9 337 aa12.75□□□□□ -0.37
PPFIA1-220ENST00000532024 BCL7CQ8WUZ0 217 aaPredicted RBP12.75□□□□□ -0.37
PPFIA1-220ENST00000532024 TAF4BQ92750 862 aa12.75□□□□□ -0.37
PPFIA1-220ENST00000532024 SUSD3Q96L08 255 aa12.75□□□□□ -0.37
PPFIA1-220ENST00000532024 BPIFA3Q9BQP9 254 aa12.75□□□□□ -0.37
PPFIA1-220ENST00000532024 ANP32EQ9BTT0 268 aa12.75□□□□□ -0.37
PPFIA1-220ENST00000532024 TTPALQ9BTX7 342 aa12.75□□□□□ -0.37
PPFIA1-220ENST00000532024 MMRN2Q9H8L6 949 aa12.75□□□□□ -0.37
PPFIA1-220ENST00000532024 TMEM8AQ9HCN3 771 aa12.75□□□□□ -0.37
PPFIA1-220ENST00000532024 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.75□□□□□ -0.37
PPFIA1-220ENST00000532024 MRPL17Q9NRX2 175 aaKnown RBP12.75□□□□□ -0.37
PPFIA1-220ENST00000532024 DSEQ9UL01 958 aa12.75□□□□□ -0.37
PPFIA1-220ENST00000532024 PLXNA4Q9HCM2 1894 aa12.74□□□□□ -0.37
PPFIA1-220ENST00000532024 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.74□□□□□ -0.37
PPFIA1-220ENST00000532024 EPOPA6NHQ4 379 aa12.74□□□□□ -0.37
PPFIA1-220ENST00000532024 KPNA7A9QM74 516 aa12.74□□□□□ -0.37
PPFIA1-220ENST00000532024 F8W810 466 aa12.74□□□□□ -0.37
PPFIA1-220ENST00000532024 HUS1O60921 280 aa12.74□□□□□ -0.37
PPFIA1-220ENST00000532024 CTSAP10619 480 aa12.74□□□□□ -0.37
PPFIA1-220ENST00000532024 FOSL2P15408 326 aa12.74□□□□□ -0.37
PPFIA1-220ENST00000532024 EEF1GP26641 437 aaKnown RBP12.74□□□□□ -0.37
PPFIA1-220ENST00000532024 GCLMP48507 274 aa12.74□□□□□ -0.37
PPFIA1-220ENST00000532024 LILRA4P59901 499 aa12.74□□□□□ -0.37
PPFIA1-220ENST00000532024 DLG4P78352 724 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms