RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, human

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-222	ENST00000531967	LAMP2	P13473	410 aa		5.67	□□□□□ -1.5
ECHDC1-222	ENST00000531967	HOXB1	P14653	301 aa	Predicted RBP	5.67	□□□□□ -1.5
ECHDC1-222	ENST00000531967	GPC1	P35052	558 aa		5.67	□□□□□ -1.5
ECHDC1-222	ENST00000531967	RFC1	P35251	1148 aa	Predicted RBP	5.67	□□□□□ -1.5
ECHDC1-222	ENST00000531967	EIF2D	P41214	584 aa	Known RBP	5.67	□□□□□ -1.5
ECHDC1-222	ENST00000531967	IFNAR2	P48551	515 aa		5.67	□□□□□ -1.5
ECHDC1-222	ENST00000531967	KCNQ4	P56696	695 aa		5.67	□□□□□ -1.5
ECHDC1-222	ENST00000531967	DLG4	P78352	724 aa		5.67	□□□□□ -1.5
ECHDC1-222	ENST00000531967	HTD2	P86397	168 aa		5.67	□□□□□ -1.5
ECHDC1-222	ENST00000531967	LASP1	Q14847	261 aa	Known RBP	5.67	□□□□□ -1.5
ECHDC1-222	ENST00000531967	FYB2	Q5VWT5	728 aa		5.67	□□□□□ -1.5
ECHDC1-222	ENST00000531967	CYP4F22	Q6NT55	531 aa		5.67	□□□□□ -1.5
ECHDC1-222	ENST00000531967	RGS9BP	Q6ZS82	235 aa		5.67	□□□□□ -1.5
ECHDC1-222	ENST00000531967	CCDC186	Q7Z3E2	898 aa		5.67	□□□□□ -1.5
ECHDC1-222	ENST00000531967	GLRX5	Q86SX6	157 aa		5.67	□□□□□ -1.5
ECHDC1-222	ENST00000531967	DENND6B	Q8NEG7	585 aa		5.67	□□□□□ -1.5
ECHDC1-222	ENST00000531967	EID2B	Q96D98	161 aa		5.67	□□□□□ -1.5
ECHDC1-222	ENST00000531967	ZNF396	Q96N95	335 aa	Predicted RBP	5.67	□□□□□ -1.5
ECHDC1-222	ENST00000531967	IGFLR1	Q9H665	355 aa		5.67	□□□□□ -1.5
ECHDC1-222	ENST00000531967	ACTR3B	Q9P1U1	418 aa		5.67	□□□□□ -1.5
ECHDC1-222	ENST00000531967	TJP2	Q9UDY2	1190 aa		5.67	□□□□□ -1.5
ECHDC1-222	ENST00000531967	ADGRE2	Q9UHX3	823 aa		5.67	□□□□□ -1.5
ECHDC1-222	ENST00000531967	PSAT1	Q9Y617	370 aa		5.67	□□□□□ -1.5
ECHDC1-222	ENST00000531967	FAM169A	Q9Y6X4	670 aa		5.67	□□□□□ -1.5
ECHDC1-222	ENST00000531967	TMEM94	Q12767	1356 aa		5.67	□□□□□ -1.5
ECHDC1-222	ENST00000531967	FAM205C	A6NFA0	338 aa		5.67	□□□□□ -1.5
ECHDC1-222	ENST00000531967	GSTA4	O15217	222 aa		5.67	□□□□□ -1.5
ECHDC1-222	ENST00000531967	RXRA	P19793	462 aa		5.67	□□□□□ -1.5
ECHDC1-222	ENST00000531967	KCNC1	P48547	511 aa		5.67	□□□□□ -1.5
ECHDC1-222	ENST00000531967	AP2B1	P63010	937 aa		5.67	□□□□□ -1.5
ECHDC1-222	ENST00000531967	CCNA1	P78396	465 aa		5.67	□□□□□ -1.5
ECHDC1-222	ENST00000531967	UGT8	Q16880	541 aa		5.67	□□□□□ -1.5
ECHDC1-222	ENST00000531967	DCAF17	Q5H9S7	520 aa	Predicted RBP	5.67	□□□□□ -1.5
ECHDC1-222	ENST00000531967	KLHL17	Q6TDP4	642 aa		5.67	□□□□□ -1.5
ECHDC1-222	ENST00000531967		Q6ZVU0	165 aa		5.67	□□□□□ -1.5
ECHDC1-222	ENST00000531967	TMEM151B	Q8IW70	566 aa		5.67	□□□□□ -1.5
ECHDC1-222	ENST00000531967	C17orf53	Q8N3J3	647 aa	Predicted RBP	5.67	□□□□□ -1.5
ECHDC1-222	ENST00000531967	FBXW5	Q969U6	566 aa		5.67	□□□□□ -1.5
ECHDC1-222	ENST00000531967	VPS33A	Q96AX1	596 aa		5.67	□□□□□ -1.5
ECHDC1-222	ENST00000531967	IQCD	Q96DY2	449 aa		5.67	□□□□□ -1.5
ECHDC1-222	ENST00000531967	CITED2	Q99967	270 aa	Predicted RBP	5.67	□□□□□ -1.5
ECHDC1-222	ENST00000531967	SNTG1	Q9NSN8	517 aa		5.67	□□□□□ -1.5
ECHDC1-222	ENST00000531967	TBC1D14	Q9P2M4	693 aa		5.67	□□□□□ -1.5
ECHDC1-222	ENST00000531967	CACNG4	Q9UBN1	327 aa		5.67	□□□□□ -1.5
ECHDC1-222	ENST00000531967	CBLC	Q9ULV8	474 aa		5.67	□□□□□ -1.5
ECHDC1-222	ENST00000531967	EXOC7	Q9UPT5	735 aa		5.67	□□□□□ -1.5
ECHDC1-222	ENST00000531967	CCDC78	A2IDD5	438 aa		5.66	□□□□□ -1.5
ECHDC1-222	ENST00000531967	NUDT19	A8MXV4	375 aa		5.66	□□□□□ -1.5
ECHDC1-222	ENST00000531967	DCDC2C	A8MYV0	355 aa		5.66	□□□□□ -1.5
ECHDC1-222	ENST00000531967	PIP5K1B	O14986	540 aa		5.66	□□□□□ -1.5
ECHDC1-222	ENST00000531967	NOL3	O60936	208 aa	Known RBP	5.66	□□□□□ -1.5
ECHDC1-222	ENST00000531967	ADAMTS4	O75173	837 aa		5.66	□□□□□ -1.5
ECHDC1-222	ENST00000531967	CLEC2L	P0C7M8	214 aa		5.66	□□□□□ -1.5
ECHDC1-222	ENST00000531967	MTHFD2	P13995	350 aa		5.66	□□□□□ -1.5
ECHDC1-222	ENST00000531967	TMEM11	P17152	192 aa		5.66	□□□□□ -1.5
ECHDC1-222	ENST00000531967	NFKB1	P19838	968 aa		5.66	□□□□□ -1.5
ECHDC1-222	ENST00000531967	TBXAS1	P24557	533 aa	Predicted RBP	5.66	□□□□□ -1.5
ECHDC1-222	ENST00000531967	EEF1D	P29692	281 aa	Known RBP	5.66	□□□□□ -1.5
ECHDC1-222	ENST00000531967	CIITA	P33076	1130 aa		5.66	□□□□□ -1.5
ECHDC1-222	ENST00000531967	PNLIPRP1	P54315	467 aa		5.66	□□□□□ -1.5
ECHDC1-222	ENST00000531967	BCAR1	P56945	870 aa		5.66	□□□□□ -1.5
ECHDC1-222	ENST00000531967	ZNF445	P59923	1031 aa		5.66	□□□□□ -1.5
ECHDC1-222	ENST00000531967	ETF1	P62495	437 aa	Known RBP	5.66	□□□□□ -1.5
ECHDC1-222	ENST00000531967	MRPS9	P82933	396 aa	Known RBP	5.66	□□□□□ -1.5
ECHDC1-222	ENST00000531967	GALNT2	Q10471	571 aa		5.66	□□□□□ -1.5
ECHDC1-222	ENST00000531967	SUZ12	Q15022	739 aa	Known RBP	5.66	□□□□□ -1.5
ECHDC1-222	ENST00000531967	PPP1R7	Q15435	360 aa		5.66	□□□□□ -1.5
ECHDC1-222	ENST00000531967	TCP11X2	Q5H9J9	407 aa		5.66	□□□□□ -1.5
ECHDC1-222	ENST00000531967	NBPF12	Q5TAG4	269 aa	Predicted RBP	5.66	□□□□□ -1.5
ECHDC1-222	ENST00000531967	USHBP1	Q8N6Y0	703 aa		5.66	□□□□□ -1.5
ECHDC1-222	ENST00000531967	CCDC148	Q8NFR7	591 aa		5.66	□□□□□ -1.5
ECHDC1-222	ENST00000531967	LINS1	Q8NG48	757 aa		5.66	□□□□□ -1.5
ECHDC1-222	ENST00000531967	BAHD1	Q8TBE0	780 aa	Predicted RBP	5.66	□□□□□ -1.5
ECHDC1-222	ENST00000531967	CUL5	Q93034	780 aa		5.66	□□□□□ -1.5
ECHDC1-222	ENST00000531967	TSEN34	Q9BSV6	310 aa	Known RBP	5.66	□□□□□ -1.5
ECHDC1-222	ENST00000531967	SPX	Q9BT56	116 aa		5.66	□□□□□ -1.5
ECHDC1-222	ENST00000531967	SLC7A5P2	Q9GIP4	190 aa		5.66	□□□□□ -1.5
ECHDC1-222	ENST00000531967	PCIF1	Q9H4Z3	704 aa		5.66	□□□□□ -1.5
ECHDC1-222	ENST00000531967	SP110	Q9HB58	689 aa		5.66	□□□□□ -1.5
ECHDC1-222	ENST00000531967	INCENP	Q9NQS7	918 aa		5.66	□□□□□ -1.5
ECHDC1-222	ENST00000531967	TAS2R3	Q9NYW6	316 aa		5.66	□□□□□ -1.5
ECHDC1-222	ENST00000531967	DNAJB9	Q9UBS3	223 aa		5.66	□□□□□ -1.5
ECHDC1-222	ENST00000531967	SMG5	Q9UPR3	1016 aa	Known RBP	5.66	□□□□□ -1.5
ECHDC1-222	ENST00000531967	ARPC4-TTLL3	A0A0A6YYG9	625 aa		5.66	□□□□□ -1.5
ECHDC1-222	ENST00000531967		A8MXE2	369 aa		5.66	□□□□□ -1.5
ECHDC1-222	ENST00000531967	LACTBL1	A8MY62	500 aa		5.66	□□□□□ -1.5
ECHDC1-222	ENST00000531967	PROM1	O43490	865 aa		5.66	□□□□□ -1.5
ECHDC1-222	ENST00000531967	ASNA1	O43681	348 aa		5.66	□□□□□ -1.5
ECHDC1-222	ENST00000531967	SIN3B	O75182	1162 aa		5.66	□□□□□ -1.5
ECHDC1-222	ENST00000531967	CAMTA2	O94983	1202 aa		5.66	□□□□□ -1.5
ECHDC1-222	ENST00000531967	TUBB4A	P04350	444 aa		5.66	□□□□□ -1.5
ECHDC1-222	ENST00000531967	HSPA1A	P0DMV8	641 aa	Known RBP	5.66	□□□□□ -1.5
ECHDC1-222	ENST00000531967	HSPA1B	P0DMV9	641 aa	Known RBP	5.66	□□□□□ -1.5
ECHDC1-222	ENST00000531967	MYL4	P12829	197 aa		5.66	□□□□□ -1.5
ECHDC1-222	ENST00000531967	PTX3	P26022	381 aa	Predicted RBP	5.66	□□□□□ -1.5
ECHDC1-222	ENST00000531967	TCF7	P36402	384 aa	Predicted RBP	5.66	□□□□□ -1.5
ECHDC1-222	ENST00000531967	ATP5O	P48047	213 aa		5.66	□□□□□ -1.5
ECHDC1-222	ENST00000531967	SUMO3	P55854	103 aa	Predicted RBP	5.66	□□□□□ -1.5
ECHDC1-222	ENST00000531967	ACTR2	P61160	394 aa		5.66	□□□□□ -1.5
ECHDC1-222	ENST00000531967	IRF9	Q00978	393 aa		5.66	□□□□□ -1.5

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