RNA–Protein interactions for RNA: ENST00000531352.5

ACER3-210, Transcript of alkaline ceramidase 3, humanhuman

TSL 1 (best)

Gene ACER3, Length 2,093 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-210ENST00000531352 DLATP10515 647 aaKnown RBP12.63□□□□□ -0.39
ACER3-210ENST00000531352 TKTP29401 623 aaKnown RBP12.63□□□□□ -0.39
ACER3-210ENST00000531352 LTBRP36941 435 aa12.63□□□□□ -0.39
ACER3-210ENST00000531352 DLG4P78352 724 aa12.63□□□□□ -0.39
ACER3-210ENST00000531352 DSG1Q02413 1049 aa12.63□□□□□ -0.39
ACER3-210ENST00000531352 SMC1AQ14683 1233 aaKnown RBP12.63□□□□□ -0.39
ACER3-210ENST00000531352 SKIV2LQ15477 1246 aaKnown RBP12.63□□□□□ -0.39
ACER3-210ENST00000531352 USP41Q3LFD5 358 aa12.63□□□□□ -0.39
ACER3-210ENST00000531352 CEP135Q66GS9 1140 aa12.63□□□□□ -0.39
ACER3-210ENST00000531352 PDE12Q6L8Q7 609 aaKnown RBP12.63□□□□□ -0.39
ACER3-210ENST00000531352 PRSS55Q6UWB4 352 aaPredicted RBP12.63□□□□□ -0.39
ACER3-210ENST00000531352 DUSP9Q99956 384 aaKnown RBP12.63□□□□□ -0.39
ACER3-210ENST00000531352 HERC2P3Q9BVR0 1158 aa12.63□□□□□ -0.39
ACER3-210ENST00000531352 KIAA1586Q9HCI6 787 aa12.63□□□□□ -0.39
ACER3-210ENST00000531352 DOCK6Q96HP0 2047 aa12.62□□□□□ -0.39
ACER3-210ENST00000531352 PLXNA3P51805 1871 aa12.62□□□□□ -0.39
ACER3-210ENST00000531352 RPL17P18621 184 aaKnown RBP12.62□□□□□ -0.39
ACER3-210ENST00000531352 GLUD2P49448 558 aa12.62□□□□□ -0.39
ACER3-210ENST00000531352 LILRA4P59901 499 aa12.62□□□□□ -0.39
ACER3-210ENST00000531352 TFF2Q03403 129 aa12.62□□□□□ -0.39
ACER3-210ENST00000531352 ADAM9Q13443 819 aa12.62□□□□□ -0.39
ACER3-210ENST00000531352 KCNC3Q14003 757 aa12.62□□□□□ -0.39
ACER3-210ENST00000531352 COL19A1Q14993 1142 aa12.62□□□□□ -0.39
ACER3-210ENST00000531352 PSMD6Q15008 389 aa12.62□□□□□ -0.39
ACER3-210ENST00000531352 NFIL3Q16649 462 aa12.62□□□□□ -0.39
ACER3-210ENST00000531352 DUSP6Q16828 381 aa12.62□□□□□ -0.39
ACER3-210ENST00000531352 CTC1Q2NKJ3 1217 aa12.62□□□□□ -0.39
ACER3-210ENST00000531352 LNX1Q8TBB1 728 aaPredicted RBP12.62□□□□□ -0.39
ACER3-210ENST00000531352 PARD3BQ8TEW8 1205 aa12.62□□□□□ -0.39
ACER3-210ENST00000531352 RIN2Q8WYP3 895 aaPredicted RBP12.62□□□□□ -0.39
ACER3-210ENST00000531352 TSPAN18Q96SJ8 248 aa12.62□□□□□ -0.39
ACER3-210ENST00000531352 INTS13Q9NVM9 706 aa12.62□□□□□ -0.39
ACER3-210ENST00000531352 SIX4Q9UIU6 781 aa12.62□□□□□ -0.39
ACER3-210ENST00000531352 NCOR1O75376 2440 aa12.62□□□□□ -0.39
ACER3-210ENST00000531352 ITGB3P05106 788 aa12.61□□□□□ -0.39
ACER3-210ENST00000531352 FGFR3P22607 806 aa12.61□□□□□ -0.39
ACER3-210ENST00000531352 MYBPC2Q14324 1141 aa12.61□□□□□ -0.39
ACER3-210ENST00000531352 C1orf220Q5T0J3 134 aa12.61□□□□□ -0.39
ACER3-210ENST00000531352 RSPO2Q6UXX9 243 aaPredicted RBP12.61□□□□□ -0.39
ACER3-210ENST00000531352 RBM43Q6ZSC3 357 aaKnown RBP12.61□□□□□ -0.39
ACER3-210ENST00000531352 FEZF2Q8TBJ5 459 aa12.61□□□□□ -0.39
ACER3-210ENST00000531352 NELFBQ8WX92 580 aa12.61□□□□□ -0.39
ACER3-210ENST00000531352 BORCS6Q96GS4 357 aa12.61□□□□□ -0.39
ACER3-210ENST00000531352 TTPALQ9BTX7 342 aa12.61□□□□□ -0.39
ACER3-210ENST00000531352 MRPL17Q9NRX2 175 aaKnown RBP12.61□□□□□ -0.39
ACER3-210ENST00000531352 NUB1Q9Y5A7 615 aa12.61□□□□□ -0.39
ACER3-210ENST00000531352 TIMM13Q9Y5L4 95 aaPredicted RBP12.61□□□□□ -0.39
ACER3-210ENST00000531352 TTC28Q96AY4 2481 aa12.61□□□□□ -0.39
ACER3-210ENST00000531352 TCF20Q9UGU0 1960 aaKnown RBP12.61□□□□□ -0.39
ACER3-210ENST00000531352 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.61□□□□□ -0.39
ACER3-210ENST00000531352 LRRIQ3A6PVS8 624 aaPredicted RBP12.61□□□□□ -0.39
ACER3-210ENST00000531352 TEX28O15482 410 aa12.61□□□□□ -0.39
ACER3-210ENST00000531352 ADAM12O43184 909 aa12.61□□□□□ -0.39
ACER3-210ENST00000531352 XPOTO43592 962 aaKnown RBP12.61□□□□□ -0.39
ACER3-210ENST00000531352 CLASP2O75122 1294 aaKnown RBP12.61□□□□□ -0.39
ACER3-210ENST00000531352 CST3P01034 146 aaPredicted RBP12.61□□□□□ -0.39
ACER3-210ENST00000531352 URODP06132 367 aa12.61□□□□□ -0.39
ACER3-210ENST00000531352 TNNI1P19237 187 aa12.61□□□□□ -0.39
ACER3-210ENST00000531352 CCNE1P24864 410 aa12.61□□□□□ -0.39
ACER3-210ENST00000531352 POLR2BP30876 1174 aaKnown RBP12.61□□□□□ -0.39
ACER3-210ENST00000531352 AARSP49588 968 aaKnown RBP eCLIP12.61□□□□□ -0.39
ACER3-210ENST00000531352 ADAM15Q13444 863 aa12.61□□□□□ -0.39
ACER3-210ENST00000531352 NFKBIBQ15653 356 aa12.61□□□□□ -0.39
ACER3-210ENST00000531352 EDRF1Q3B7T1 1238 aa12.61□□□□□ -0.39
ACER3-210ENST00000531352 KIAA1841Q6NSI8 718 aa12.61□□□□□ -0.39
ACER3-210ENST00000531352 TTI2Q6NXR4 508 aa12.61□□□□□ -0.39
ACER3-210ENST00000531352 EP400NLQ6ZTU2 488 aa12.61□□□□□ -0.39
ACER3-210ENST00000531352 NT5DC4Q86YG4 428 aa12.61□□□□□ -0.39
ACER3-210ENST00000531352 GLYCTKQ8IVS8 523 aa12.61□□□□□ -0.39
ACER3-210ENST00000531352 CSGALNACT2Q8N6G5 542 aa12.61□□□□□ -0.39
ACER3-210ENST00000531352 SUSD3Q96L08 255 aa12.61□□□□□ -0.39
ACER3-210ENST00000531352 KLHL5Q96PQ7 755 aa12.61□□□□□ -0.39
ACER3-210ENST00000531352 CLSTN3Q9BQT9 956 aa12.61□□□□□ -0.39
ACER3-210ENST00000531352 CLDND1Q9NY35 253 aa12.61□□□□□ -0.39
ACER3-210ENST00000531352 HCFC2Q9Y5Z7 792 aa12.61□□□□□ -0.39
ACER3-210ENST00000531352 MTCL1Q9Y4B5 1905 aaKnown RBP12.61□□□□□ -0.39
ACER3-210ENST00000531352 LRRN2O75325 713 aa12.6□□□□□ -0.39
ACER3-210ENST00000531352 TBX10O75333 385 aa12.6□□□□□ -0.39
ACER3-210ENST00000531352 MBD3O95983 291 aa12.6□□□□□ -0.39
ACER3-210ENST00000531352 CDR1P51861 262 aa12.6□□□□□ -0.39
ACER3-210ENST00000531352 DUOXA2Q1HG44 320 aa12.6□□□□□ -0.39
ACER3-210ENST00000531352 LLGL2Q6P1M3 1020 aa12.6□□□□□ -0.39
ACER3-210ENST00000531352 C11orf57Q6ZUT1 292 aaPredicted RBP12.6□□□□□ -0.39
ACER3-210ENST00000531352 WDR49Q8IV35 697 aa12.6□□□□□ -0.39
ACER3-210ENST00000531352 DHTKD1Q96HY7 919 aaPredicted RBP12.6□□□□□ -0.39
ACER3-210ENST00000531352 FNBP1Q96RU3 617 aa12.6□□□□□ -0.39
ACER3-210ENST00000531352 AGAP1Q9UPQ3 857 aa12.6□□□□□ -0.39
ACER3-210ENST00000531352 H3BQ06 376 aaPredicted RBP12.6□□□□□ -0.39
ACER3-210ENST00000531352 M0QZQ0 153 aa12.6□□□□□ -0.39
ACER3-210ENST00000531352 PSMA7O14818 248 aa12.6□□□□□ -0.39
ACER3-210ENST00000531352 TMEM191BP0C7N4 346 aa12.6□□□□□ -0.39
ACER3-210ENST00000531352 TRIM49P0CI25 452 aa12.6□□□□□ -0.39
ACER3-210ENST00000531352 TRIM49CP0CI26 452 aa12.6□□□□□ -0.39
ACER3-210ENST00000531352 EPCAMP16422 314 aa12.6□□□□□ -0.39
ACER3-210ENST00000531352 CLDN10P78369 228 aa12.6□□□□□ -0.39
ACER3-210ENST00000531352 SURF1Q15526 300 aa12.6□□□□□ -0.39
ACER3-210ENST00000531352 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.6□□□□□ -0.39
ACER3-210ENST00000531352 TRAPPC11Q7Z392 1133 aa12.6□□□□□ -0.39
ACER3-210ENST00000531352 ZC3H3Q8IXZ2 948 aaKnown RBP12.6□□□□□ -0.39
ACER3-210ENST00000531352 EFHBQ8N7U6 833 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms