RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 TNFSF9P41273 254 aa24.25■■□□□ 1.47
TRAPPC4-210ENST00000531290 GPC5P78333 572 aa24.25■■□□□ 1.47
TRAPPC4-210ENST00000531290 PHLDB3Q6NSJ2 640 aa24.25■■□□□ 1.47
TRAPPC4-210ENST00000531290 NPAS3Q8IXF0 933 aa24.25■■□□□ 1.47
TRAPPC4-210ENST00000531290 TCEAL8Q8IYN2 117 aa24.25■■□□□ 1.47
TRAPPC4-210ENST00000531290 ING5Q8WYH8 240 aa24.25■■□□□ 1.47
TRAPPC4-210ENST00000531290 LARP4BQ92615 738 aaKnown RBP24.25■■□□□ 1.47
TRAPPC4-210ENST00000531290 SHDQ96IW2 340 aa24.25■■□□□ 1.47
TRAPPC4-210ENST00000531290 CCSER1Q9C0I3 900 aa24.25■■□□□ 1.47
TRAPPC4-210ENST00000531290 C2orf16Q68DN1 1984 aa24.25■■□□□ 1.47
TRAPPC4-210ENST00000531290 KMT2EQ8IZD2 1858 aa24.24■■□□□ 1.47
TRAPPC4-210ENST00000531290 LACTBL1A8MY62 500 aa24.24■■□□□ 1.47
TRAPPC4-210ENST00000531290 PROB1E7EW31 1015 aa24.24■■□□□ 1.47
TRAPPC4-210ENST00000531290 PIGRP01833 764 aa24.24■■□□□ 1.47
TRAPPC4-210ENST00000531290 LRPAP1P30533 357 aa24.24■■□□□ 1.47
TRAPPC4-210ENST00000531290 ZBTB6Q15916 424 aa24.24■■□□□ 1.47
TRAPPC4-210ENST00000531290 KRI1Q8N9T8 703 aaKnown RBP24.24■■□□□ 1.47
TRAPPC4-210ENST00000531290 FAM212AQ96EL1 285 aa24.24■■□□□ 1.47
TRAPPC4-210ENST00000531290 TSPAN18Q96SJ8 248 aa24.24■■□□□ 1.47
TRAPPC4-210ENST00000531290 MSTO1Q9BUK6 570 aa24.24■■□□□ 1.47
TRAPPC4-210ENST00000531290 GDE1Q9NZC3 331 aa24.24■■□□□ 1.47
TRAPPC4-210ENST00000531290 CCDC39Q9UFE4 941 aa24.24■■□□□ 1.47
TRAPPC4-210ENST00000531290 MAFFQ9ULX9 164 aa24.24■■□□□ 1.47
TRAPPC4-210ENST00000531290 CLIC4Q9Y696 253 aa24.24■■□□□ 1.47
TRAPPC4-210ENST00000531290 NBL1P41271 181 aa24.23■■□□□ 1.47
TRAPPC4-210ENST00000531290 YWHAHQ04917 246 aaPredicted RBP24.23■■□□□ 1.47
TRAPPC4-210ENST00000531290 ANGPT1Q15389 498 aa24.23■■□□□ 1.47
TRAPPC4-210ENST00000531290 ENOX2Q16206 610 aaKnown RBP24.23■■□□□ 1.47
TRAPPC4-210ENST00000531290 ELMOD1Q8N336 334 aa24.23■■□□□ 1.47
TRAPPC4-210ENST00000531290 MCRS1Q96EZ8 462 aa24.23■■□□□ 1.47
TRAPPC4-210ENST00000531290 EPSTI1Q96J88 318 aa24.23■■□□□ 1.47
TRAPPC4-210ENST00000531290 CORO1BQ9BR76 489 aa24.23■■□□□ 1.47
TRAPPC4-210ENST00000531290 AVENQ9NQS1 362 aaPredicted RBP24.23■■□□□ 1.47
TRAPPC4-210ENST00000531290 AFF4Q9UHB7 1163 aaKnown RBP24.23■■□□□ 1.47
TRAPPC4-210ENST00000531290 SIT1Q9Y3P8 196 aa24.23■■□□□ 1.47
TRAPPC4-210ENST00000531290 A0A0B4J269 797 aa24.22■■□□□ 1.47
TRAPPC4-210ENST00000531290 ZNF197O14709 1029 aa24.22■■□□□ 1.47
TRAPPC4-210ENST00000531290 SEC24AO95486 1093 aa24.22■■□□□ 1.47
TRAPPC4-210ENST00000531290 CPB1P15086 417 aa24.22■■□□□ 1.47
TRAPPC4-210ENST00000531290 NMT1P30419 496 aaKnown RBP24.22■■□□□ 1.47
TRAPPC4-210ENST00000531290 GTF2BQ00403 316 aa24.22■■□□□ 1.47
TRAPPC4-210ENST00000531290 ADCY1Q08828 1119 aa24.22■■□□□ 1.47
TRAPPC4-210ENST00000531290 SPECC1Q5M775 1068 aa24.22■■□□□ 1.47
TRAPPC4-210ENST00000531290 ZBTB41Q5SVQ8 909 aa24.22■■□□□ 1.47
TRAPPC4-210ENST00000531290 IQCEQ6IPM2 695 aa24.22■■□□□ 1.47
TRAPPC4-210ENST00000531290 DSTYKQ6XUX3 929 aa24.22■■□□□ 1.47
TRAPPC4-210ENST00000531290 USP37Q86T82 979 aa24.22■■□□□ 1.47
TRAPPC4-210ENST00000531290 CD302Q8IX05 232 aa24.22■■□□□ 1.47
TRAPPC4-210ENST00000531290 KXD1Q9BQD3 176 aa24.22■■□□□ 1.47
TRAPPC4-210ENST00000531290 OXCT2Q9BYC2 517 aaPredicted RBP24.22■■□□□ 1.47
TRAPPC4-210ENST00000531290 INSL5Q9Y5Q6 135 aa24.22■■□□□ 1.47
TRAPPC4-210ENST00000531290 CACNA1HO95180 2353 aa24.21■■□□□ 1.47
TRAPPC4-210ENST00000531290 M0QZQ0 153 aa24.21■■□□□ 1.47
TRAPPC4-210ENST00000531290 PFKPQ01813 784 aa24.21■■□□□ 1.47
TRAPPC4-210ENST00000531290 SLC5A9Q2M3M2 681 aa24.21■■□□□ 1.47
TRAPPC4-210ENST00000531290 CYP4A22Q5TCH4 519 aa24.21■■□□□ 1.47
TRAPPC4-210ENST00000531290 MAP4K3Q8IVH8 894 aa24.21■■□□□ 1.47
TRAPPC4-210ENST00000531290 BEST2Q8NFU1 509 aa24.21■■□□□ 1.47
TRAPPC4-210ENST00000531290 ZNF512Q96ME7 567 aaPredicted RBP24.21■■□□□ 1.47
TRAPPC4-210ENST00000531290 TIMM13Q9Y5L4 95 aaPredicted RBP24.21■■□□□ 1.47
TRAPPC4-210ENST00000531290 SRPRBQ9Y5M8 271 aaKnown RBP24.21■■□□□ 1.47
TRAPPC4-210ENST00000531290 FAM189A1O60320 539 aa24.2■■□□□ 1.46
TRAPPC4-210ENST00000531290 OAZ2O95190 189 aa24.2■■□□□ 1.46
TRAPPC4-210ENST00000531290 DCNP07585 359 aaKnown RBP24.2■■□□□ 1.46
TRAPPC4-210ENST00000531290 SYT1P21579 422 aa24.2■■□□□ 1.46
TRAPPC4-210ENST00000531290 TXLNAP40222 546 aa24.2■■□□□ 1.46
TRAPPC4-210ENST00000531290 SNW1Q13573 536 aaKnown RBP24.2■■□□□ 1.46
TRAPPC4-210ENST00000531290 PTPAQ15257 358 aa24.2■■□□□ 1.46
TRAPPC4-210ENST00000531290 SLC44A4Q53GD3 710 aa24.2■■□□□ 1.46
TRAPPC4-210ENST00000531290 SLFN12LQ6IEE8 588 aa24.2■■□□□ 1.46
TRAPPC4-210ENST00000531290 USP49Q70CQ1 688 aa24.2■■□□□ 1.46
TRAPPC4-210ENST00000531290 PDZD4Q76G19 769 aaPredicted RBP24.2■■□□□ 1.46
TRAPPC4-210ENST00000531290 FRMD5Q7Z6J6 570 aa24.2■■□□□ 1.46
TRAPPC4-210ENST00000531290 TMEM130Q8N3G9 435 aa24.2■■□□□ 1.46
TRAPPC4-210ENST00000531290 STK17AQ9UEE5 414 aa24.2■■□□□ 1.46
TRAPPC4-210ENST00000531290 CPSF3Q9UKF6 684 aaKnown RBP24.2■■□□□ 1.46
TRAPPC4-210ENST00000531290 ADRB2P07550 413 aa24.19■■□□□ 1.46
TRAPPC4-210ENST00000531290 GUCY2FP51841 1108 aa24.19■■□□□ 1.46
TRAPPC4-210ENST00000531290 STARD6P59095 220 aa24.19■■□□□ 1.46
TRAPPC4-210ENST00000531290 CEBPZQ03701 1054 aaKnown RBP24.19■■□□□ 1.46
TRAPPC4-210ENST00000531290 TWF1Q12792 350 aa24.19■■□□□ 1.46
TRAPPC4-210ENST00000531290 ZC2HC1CQ53FD0 456 aaPredicted RBP24.19■■□□□ 1.46
TRAPPC4-210ENST00000531290 SPATA1Q5VX52 437 aa24.19■■□□□ 1.46
TRAPPC4-210ENST00000531290 RRAGBQ5VZM2 374 aa24.19■■□□□ 1.46
TRAPPC4-210ENST00000531290 ADALQ6DHV7 355 aa24.19■■□□□ 1.46
TRAPPC4-210ENST00000531290 SLC39A4Q6P5W5 647 aa24.19■■□□□ 1.46
TRAPPC4-210ENST00000531290 RNF19BQ6ZMZ0 732 aa24.19■■□□□ 1.46
TRAPPC4-210ENST00000531290 DYMQ7RTS9 669 aa24.19■■□□□ 1.46
TRAPPC4-210ENST00000531290 NKD2Q969F2 451 aaPredicted RBP24.19■■□□□ 1.46
TRAPPC4-210ENST00000531290 FIZ1Q96SL8 496 aa24.19■■□□□ 1.46
TRAPPC4-210ENST00000531290 FBXO2Q9UK22 296 aaPredicted RBP24.19■■□□□ 1.46
TRAPPC4-210ENST00000531290 ANKRD63C9JTQ0 380 aa24.18■■□□□ 1.46
TRAPPC4-210ENST00000531290 ECI2O75521 394 aa24.18■■□□□ 1.46
TRAPPC4-210ENST00000531290 MICAL2O94851 1124 aa24.18■■□□□ 1.46
TRAPPC4-210ENST00000531290 CEBPBP17676 345 aa24.18■■□□□ 1.46
TRAPPC4-210ENST00000531290 PAX3P23760 479 aa24.18■■□□□ 1.46
TRAPPC4-210ENST00000531290 AARSP49588 968 aaKnown RBP eCLIP24.18■■□□□ 1.46
TRAPPC4-210ENST00000531290 PRKCQQ04759 706 aa24.18■■□□□ 1.46
TRAPPC4-210ENST00000531290 RESTQ13127 1097 aa24.18■■□□□ 1.46
TRAPPC4-210ENST00000531290 JADE1Q6IE81 842 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms