RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 GAS6Q14393 721 aa10.11□□□□□ -0.79
CHMP4A-205ENST00000531158 RABEP1Q15276 862 aa10.11□□□□□ -0.79
CHMP4A-205ENST00000531158 MAPK6Q16659 721 aa10.11□□□□□ -0.79
CHMP4A-205ENST00000531158 PDXDC1Q6P996 788 aa10.11□□□□□ -0.79
CHMP4A-205ENST00000531158 LRSAM1Q6UWE0 723 aa10.11□□□□□ -0.79
CHMP4A-205ENST00000531158 TAS1R3Q7RTX0 852 aa10.11□□□□□ -0.79
CHMP4A-205ENST00000531158 MAP4K3Q8IVH8 894 aa10.11□□□□□ -0.79
CHMP4A-205ENST00000531158 ZBTB8OSQ8IWT0 167 aa10.11□□□□□ -0.79
CHMP4A-205ENST00000531158 DAW1Q8N136 415 aa10.11□□□□□ -0.79
CHMP4A-205ENST00000531158 ZNF461Q8TAF7 563 aa10.11□□□□□ -0.79
CHMP4A-205ENST00000531158 NETO1Q8TDF5 533 aa10.11□□□□□ -0.79
CHMP4A-205ENST00000531158 ATRIPQ8WXE1 791 aa10.11□□□□□ -0.79
CHMP4A-205ENST00000531158 DNASE1L2Q92874 299 aa10.11□□□□□ -0.79
CHMP4A-205ENST00000531158 ELSPBP1Q96BH3 223 aa10.11□□□□□ -0.79
CHMP4A-205ENST00000531158 RSPRY1Q96DX4 576 aa10.11□□□□□ -0.79
CHMP4A-205ENST00000531158 BORCS6Q96GS4 357 aa10.11□□□□□ -0.79
CHMP4A-205ENST00000531158 ASB16Q96NS5 453 aa10.11□□□□□ -0.79
CHMP4A-205ENST00000531158 KIF2CQ99661 725 aa10.11□□□□□ -0.79
CHMP4A-205ENST00000531158 C2orf40Q9H1Z8 148 aa10.11□□□□□ -0.79
CHMP4A-205ENST00000531158 CDT1Q9H211 546 aa10.11□□□□□ -0.79
CHMP4A-205ENST00000531158 CHRDQ9H2X0 955 aa10.11□□□□□ -0.79
CHMP4A-205ENST00000531158 PTPRHQ9HD43 1115 aa10.11□□□□□ -0.79
CHMP4A-205ENST00000531158 GDE1Q9NZC3 331 aa10.11□□□□□ -0.79
CHMP4A-205ENST00000531158 CEP72Q9P209 647 aa10.11□□□□□ -0.79
CHMP4A-205ENST00000531158 INSL5Q9Y5Q6 135 aa10.11□□□□□ -0.79
CHMP4A-205ENST00000531158 GCN1Q92616 2671 aaKnown RBP10.11□□□□□ -0.79
CHMP4A-205ENST00000531158 ATF2P15336 505 aa10.1□□□□□ -0.79
CHMP4A-205ENST00000531158 GJA1P17302 382 aa10.1□□□□□ -0.79
CHMP4A-205ENST00000531158 RPA1P27694 616 aa10.1□□□□□ -0.79
CHMP4A-205ENST00000531158 MCM4P33991 863 aa10.1□□□□□ -0.79
CHMP4A-205ENST00000531158 MCM7P33993 719 aa10.1□□□□□ -0.79
CHMP4A-205ENST00000531158 VIPR2P41587 438 aa10.1□□□□□ -0.79
CHMP4A-205ENST00000531158 SHC2P98077 582 aa10.1□□□□□ -0.79
CHMP4A-205ENST00000531158 MRPL58Q14197 206 aaKnown RBP10.1□□□□□ -0.79
CHMP4A-205ENST00000531158 LPAL2Q16609 132 aa10.1□□□□□ -0.79
CHMP4A-205ENST00000531158 DCAF4L1Q3SXM0 396 aa10.1□□□□□ -0.79
CHMP4A-205ENST00000531158 ATF7IP2Q5U623 682 aa10.1□□□□□ -0.79
CHMP4A-205ENST00000531158 VITQ6UXI7 678 aa10.1□□□□□ -0.79
CHMP4A-205ENST00000531158 ZNF852Q6ZMS4 543 aa10.1□□□□□ -0.79
CHMP4A-205ENST00000531158 ANKS3Q6ZW76 656 aa10.1□□□□□ -0.79
CHMP4A-205ENST00000531158 TCEAL8Q8IYN2 117 aa10.1□□□□□ -0.79
CHMP4A-205ENST00000531158 HS6ST3Q8IZP7 471 aa10.1□□□□□ -0.79
CHMP4A-205ENST00000531158 DEPTORQ8TB45 409 aa10.1□□□□□ -0.79
CHMP4A-205ENST00000531158 WASF1Q92558 559 aa10.1□□□□□ -0.79
CHMP4A-205ENST00000531158 C18orf25Q96B23 403 aaPredicted RBP10.1□□□□□ -0.79
CHMP4A-205ENST00000531158 NACC1Q96RE7 527 aa10.1□□□□□ -0.79
CHMP4A-205ENST00000531158 CORO1BQ9BR76 489 aa10.1□□□□□ -0.79
CHMP4A-205ENST00000531158 C2orf42Q9NWW7 574 aa10.1□□□□□ -0.79
CHMP4A-205ENST00000531158 FBXL5Q9UKA1 691 aa10.1□□□□□ -0.79
CHMP4A-205ENST00000531158 NDRG2Q9UN36 371 aaKnown RBP10.1□□□□□ -0.79
CHMP4A-205ENST00000531158 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.1□□□□□ -0.79
CHMP4A-205ENST00000531158 IGF2RP11717 2491 aa10.1□□□□□ -0.79
CHMP4A-205ENST00000531158 NUP205Q92621 2012 aa10.09□□□□□ -0.79
CHMP4A-205ENST00000531158 ZZEF1O43149 2961 aa10.09□□□□□ -0.79
CHMP4A-205ENST00000531158 PODXLO00592 558 aa10.09□□□□□ -0.79
CHMP4A-205ENST00000531158 PTPN2P17706 415 aa10.09□□□□□ -0.79
CHMP4A-205ENST00000531158 PROZP22891 400 aa10.09□□□□□ -0.79
CHMP4A-205ENST00000531158 GRM5P41594 1212 aa10.09□□□□□ -0.79
CHMP4A-205ENST00000531158 OSTNP61366 133 aa10.09□□□□□ -0.79
CHMP4A-205ENST00000531158 SRSF5Q13243 272 aaKnown RBP10.09□□□□□ -0.79
CHMP4A-205ENST00000531158 N4BP2L1Q5TBK1 243 aaPredicted RBP10.09□□□□□ -0.79
CHMP4A-205ENST00000531158 MAMSTRQ6ZN01 415 aa10.09□□□□□ -0.79
CHMP4A-205ENST00000531158 RTL10Q7L3V2 364 aa10.09□□□□□ -0.79
CHMP4A-205ENST00000531158 C4orf32Q8N8J7 132 aa10.09□□□□□ -0.79
CHMP4A-205ENST00000531158 UROC1Q96N76 676 aa10.09□□□□□ -0.79
CHMP4A-205ENST00000531158 NELL2Q99435 816 aa10.09□□□□□ -0.79
CHMP4A-205ENST00000531158 ADPGKQ9BRR6 497 aa10.09□□□□□ -0.79
CHMP4A-205ENST00000531158 LRRC3Q9BY71 257 aa10.09□□□□□ -0.79
CHMP4A-205ENST00000531158 BHMT2Q9H2M3 363 aa10.09□□□□□ -0.79
CHMP4A-205ENST00000531158 CRISPLD1Q9H336 500 aa10.09□□□□□ -0.79
CHMP4A-205ENST00000531158 ZNF334Q9HCZ1 680 aaPredicted RBP10.09□□□□□ -0.79
CHMP4A-205ENST00000531158 GMEB2Q9UKD1 530 aa10.09□□□□□ -0.79
CHMP4A-205ENST00000531158 TNFSF13BQ9Y275 285 aa10.09□□□□□ -0.79
CHMP4A-205ENST00000531158 FLNBO75369 2602 aaKnown RBP10.09□□□□□ -0.79
CHMP4A-205ENST00000531158 ANAPC1Q9H1A4 1944 aa10.09□□□□□ -0.79
CHMP4A-205ENST00000531158 AKAP13Q12802 2813 aa10.08□□□□□ -0.8
CHMP4A-205ENST00000531158 PTPRDP23468 1912 aa10.08□□□□□ -0.8
CHMP4A-205ENST00000531158 ARHGEF35A5YM69 484 aa10.08□□□□□ -0.8
CHMP4A-205ENST00000531158 C1QTNF9BB2RNN3 333 aa10.08□□□□□ -0.8
CHMP4A-205ENST00000531158 PRRG1O14668 218 aa10.08□□□□□ -0.8
CHMP4A-205ENST00000531158 MICAL2O94851 1124 aa10.08□□□□□ -0.8
CHMP4A-205ENST00000531158 LRG1P02750 347 aa10.08□□□□□ -0.8
CHMP4A-205ENST00000531158 C1QTNF9P0C862 333 aa10.08□□□□□ -0.8
CHMP4A-205ENST00000531158 CHRNB1P11230 501 aa10.08□□□□□ -0.8
CHMP4A-205ENST00000531158 KCNE1P15382 129 aa10.08□□□□□ -0.8
CHMP4A-205ENST00000531158 EPHA5P54756 1037 aa10.08□□□□□ -0.8
CHMP4A-205ENST00000531158 ARPP19P56211 112 aa10.08□□□□□ -0.8
CHMP4A-205ENST00000531158 SATB1Q01826 763 aa10.08□□□□□ -0.8
CHMP4A-205ENST00000531158 GUCY1B3Q02153 619 aa10.08□□□□□ -0.8
CHMP4A-205ENST00000531158 SPEM2Q0P670 501 aa10.08□□□□□ -0.8
CHMP4A-205ENST00000531158 MAPK7Q13164 816 aa10.08□□□□□ -0.8
CHMP4A-205ENST00000531158 TMEM132AQ24JP5 1023 aa10.08□□□□□ -0.8
CHMP4A-205ENST00000531158 L1TD1Q5T7N2 865 aaKnown RBP10.08□□□□□ -0.8
CHMP4A-205ENST00000531158 Q6ZS52 159 aa10.08□□□□□ -0.8
CHMP4A-205ENST00000531158 LRRC3BQ96PB8 259 aa10.08□□□□□ -0.8
CHMP4A-205ENST00000531158 ACO2Q99798 780 aaKnown RBP10.08□□□□□ -0.8
CHMP4A-205ENST00000531158 TRMT61BQ9BVS5 477 aaKnown RBP10.08□□□□□ -0.8
CHMP4A-205ENST00000531158 TARS2Q9BW92 718 aaKnown RBP10.08□□□□□ -0.8
CHMP4A-205ENST00000531158 FAM126AQ9BYI3 521 aaPredicted RBP10.08□□□□□ -0.8
CHMP4A-205ENST00000531158 BRD9Q9H8M2 597 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms