RNA–Protein interactions for RNA: ENST00000531014.5

CTNND1-229, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-229ENST00000531014 REXO4Q9GZR2 422 aaKnown RBP7.59□□□□□ -1.19
CTNND1-229ENST00000531014 EPN3Q9H201 632 aa7.59□□□□□ -1.19
CTNND1-229ENST00000531014 PLEKHA5Q9HAU0 1116 aa7.59□□□□□ -1.19
CTNND1-229ENST00000531014 MLXIPLQ9NP71 852 aa7.59□□□□□ -1.19
CTNND1-229ENST00000531014 GPRC5DQ9NZD1 345 aa7.59□□□□□ -1.19
CTNND1-229ENST00000531014 VAV3Q9UKW4 847 aa7.59□□□□□ -1.19
CTNND1-229ENST00000531014 PITPNM2Q9BZ72 1349 aa7.59□□□□□ -1.19
CTNND1-229ENST00000531014 EYA2O00167 538 aa7.59□□□□□ -1.19
CTNND1-229ENST00000531014 SLC27A2O14975 620 aa7.59□□□□□ -1.19
CTNND1-229ENST00000531014 MSR1P21757 451 aa7.59□□□□□ -1.19
CTNND1-229ENST00000531014 ALDH18A1P54886 795 aaKnown RBP7.59□□□□□ -1.19
CTNND1-229ENST00000531014 RBL2Q08999 1139 aa7.59□□□□□ -1.19
CTNND1-229ENST00000531014 RBBP7Q16576 425 aa7.59□□□□□ -1.19
CTNND1-229ENST00000531014 ZNF544Q6NX49 715 aa7.59□□□□□ -1.19
CTNND1-229ENST00000531014 LAYNQ6UX15 382 aa7.59□□□□□ -1.19
CTNND1-229ENST00000531014 WDR36Q8NI36 951 aaKnown RBP7.59□□□□□ -1.19
CTNND1-229ENST00000531014 RNASE11Q8TAA1 199 aaKnown RBP7.59□□□□□ -1.19
CTNND1-229ENST00000531014 RIN3Q8TB24 985 aa7.59□□□□□ -1.19
CTNND1-229ENST00000531014 SYMPKQ92797 1274 aaKnown RBP7.59□□□□□ -1.19
CTNND1-229ENST00000531014 PSD3Q9NYI0 1048 aa7.59□□□□□ -1.19
CTNND1-229ENST00000531014 SUPT3HB4E1H0 165 aa7.59□□□□□ -1.19
CTNND1-229ENST00000531014 KLHL2O95198 593 aa7.59□□□□□ -1.19
CTNND1-229ENST00000531014 FGGP02679 453 aa7.59□□□□□ -1.19
CTNND1-229ENST00000531014 CPA1P15085 419 aa7.59□□□□□ -1.19
CTNND1-229ENST00000531014 QARSP47897 775 aaKnown RBP7.59□□□□□ -1.19
CTNND1-229ENST00000531014 ARF3P61204 181 aaPredicted RBP7.59□□□□□ -1.19
CTNND1-229ENST00000531014 ARF1P84077 181 aaKnown RBP7.59□□□□□ -1.19
CTNND1-229ENST00000531014 DMP1Q13316 513 aaPredicted RBP7.59□□□□□ -1.19
CTNND1-229ENST00000531014 RASGRF1Q13972 1273 aa7.59□□□□□ -1.19
CTNND1-229ENST00000531014 ATP13A5Q4VNC0 1218 aa7.59□□□□□ -1.19
CTNND1-229ENST00000531014 TAS2R42Q7RTR8 314 aa7.59□□□□□ -1.19
CTNND1-229ENST00000531014 CCDC36Q8IYA8 594 aa7.59□□□□□ -1.19
CTNND1-229ENST00000531014 PPM1NQ8N819 430 aa7.59□□□□□ -1.19
CTNND1-229ENST00000531014 CCDC28BQ9BUN5 200 aa7.59□□□□□ -1.19
CTNND1-229ENST00000531014 USP44Q9H0E7 712 aa7.59□□□□□ -1.19
CTNND1-229ENST00000531014 ATP8A2Q9NTI2 1148 aa7.59□□□□□ -1.19
CTNND1-229ENST00000531014 ZFATQ9P243 1243 aa7.59□□□□□ -1.19
CTNND1-229ENST00000531014 APPL1Q9UKG1 709 aa7.59□□□□□ -1.19
CTNND1-229ENST00000531014 DTNAQ9Y4J8 743 aa7.59□□□□□ -1.19
CTNND1-229ENST00000531014 QRICH2Q9H0J4 1663 aa7.59□□□□□ -1.19
CTNND1-229ENST00000531014 E5RI56 91 aa7.58□□□□□ -1.2
CTNND1-229ENST00000531014 AXIN1O15169 862 aa7.58□□□□□ -1.2
CTNND1-229ENST00000531014 ZNF862O60290 1169 aa7.58□□□□□ -1.2
CTNND1-229ENST00000531014 CAND2O75155 1236 aa7.58□□□□□ -1.2
CTNND1-229ENST00000531014 CNOT3O75175 753 aaKnown RBP7.58□□□□□ -1.2
CTNND1-229ENST00000531014 PSMC3P17980 439 aa7.58□□□□□ -1.2
CTNND1-229ENST00000531014 STAT5AP42229 794 aa7.58□□□□□ -1.2
CTNND1-229ENST00000531014 STAT5BP51692 787 aa7.58□□□□□ -1.2
CTNND1-229ENST00000531014 MRPS25P82663 173 aaKnown RBP7.58□□□□□ -1.2
CTNND1-229ENST00000531014 CHRNDQ07001 517 aa7.58□□□□□ -1.2
CTNND1-229ENST00000531014 SFSWAPQ12872 951 aaKnown RBP7.58□□□□□ -1.2
CTNND1-229ENST00000531014 ZNF57Q68EA5 555 aaPredicted RBP7.58□□□□□ -1.2
CTNND1-229ENST00000531014 ESRP1Q6NXG1 681 aaKnown RBP7.58□□□□□ -1.2
CTNND1-229ENST00000531014 SAMD7Q7Z3H4 446 aa7.58□□□□□ -1.2
CTNND1-229ENST00000531014 RHOT2Q8IXI1 618 aa7.58□□□□□ -1.2
CTNND1-229ENST00000531014 SLAIN1Q8ND83 568 aa7.58□□□□□ -1.2
CTNND1-229ENST00000531014 MOSPD2Q8NHP6 518 aa7.58□□□□□ -1.2
CTNND1-229ENST00000531014 CNDP1Q96KN2 507 aa7.58□□□□□ -1.2
CTNND1-229ENST00000531014 FOXP3Q9BZS1 431 aa7.58□□□□□ -1.2
CTNND1-229ENST00000531014 POLR1BQ9H9Y6 1135 aa7.58□□□□□ -1.2
CTNND1-229ENST00000531014 LRRC4Q9HBW1 653 aa7.58□□□□□ -1.2
CTNND1-229ENST00000531014 C8orf4Q9NR00 106 aa7.58□□□□□ -1.2
CTNND1-229ENST00000531014 MAD2L2Q9UI95 211 aa7.58□□□□□ -1.2
CTNND1-229ENST00000531014 PCDHB15Q9Y5E8 787 aa7.58□□□□□ -1.2
CTNND1-229ENST00000531014 MIF4GDA9UHW6 222 aaKnown RBP7.58□□□□□ -1.2
CTNND1-229ENST00000531014 SLC1A4P43007 532 aa7.58□□□□□ -1.2
CTNND1-229ENST00000531014 CENPAP49450 140 aa7.58□□□□□ -1.2
CTNND1-229ENST00000531014 SARSP49591 514 aaKnown RBP7.58□□□□□ -1.2
CTNND1-229ENST00000531014 NLRP11P59045 1033 aaKnown RBP7.58□□□□□ -1.2
CTNND1-229ENST00000531014 TFDP2Q14188 446 aa7.58□□□□□ -1.2
CTNND1-229ENST00000531014 ZSWIM7Q19AV6 140 aa7.58□□□□□ -1.2
CTNND1-229ENST00000531014 XKR9Q5GH70 373 aa7.58□□□□□ -1.2
CTNND1-229ENST00000531014 NSMFQ6X4W1 530 aa7.58□□□□□ -1.2
CTNND1-229ENST00000531014 SETD3Q86TU7 594 aaPredicted RBP7.58□□□□□ -1.2
CTNND1-229ENST00000531014 METTL13Q8N6R0 699 aa7.58□□□□□ -1.2
CTNND1-229ENST00000531014 SH3KBP1Q96B97 665 aa7.58□□□□□ -1.2
CTNND1-229ENST00000531014 CD209Q9NNX6 404 aa7.58□□□□□ -1.2
CTNND1-229ENST00000531014 HMG20AQ9NP66 347 aa7.58□□□□□ -1.2
CTNND1-229ENST00000531014 C20orf96Q9NUD7 363 aaPredicted RBP7.58□□□□□ -1.2
CTNND1-229ENST00000531014 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.58□□□□□ -1.2
CTNND1-229ENST00000531014 UBE2Q2LH0YL09 131 aa7.58□□□□□ -1.2
CTNND1-229ENST00000531014 BTN3A3O00478 584 aa7.58□□□□□ -1.2
CTNND1-229ENST00000531014 STK25O00506 426 aa7.58□□□□□ -1.2
CTNND1-229ENST00000531014 PRPF4O43172 522 aaKnown RBP eCLIP7.58□□□□□ -1.24e-8■□□□□ 10.4
CTNND1-229ENST00000531014 BCL10O95999 233 aa7.58□□□□□ -1.2
CTNND1-229ENST00000531014 SERPING1P05155 500 aa7.58□□□□□ -1.2
CTNND1-229ENST00000531014 ITGA1P56199 1179 aa7.58□□□□□ -1.2
CTNND1-229ENST00000531014 LLGL1Q15334 1064 aa7.58□□□□□ -1.2
CTNND1-229ENST00000531014 NFIL3Q16649 462 aa7.58□□□□□ -1.2
CTNND1-229ENST00000531014 MAN2A1Q16706 1144 aa7.58□□□□□ -1.2
CTNND1-229ENST00000531014 KCTD21Q4G0X4 260 aa7.58□□□□□ -1.2
CTNND1-229ENST00000531014 SUSD4Q5VX71 490 aa7.58□□□□□ -1.2
CTNND1-229ENST00000531014 OR6B2Q6IFH4 312 aa7.58□□□□□ -1.2
CTNND1-229ENST00000531014 METTL23Q86XA0 190 aa7.58□□□□□ -1.2
CTNND1-229ENST00000531014 SLFN12Q8IYM2 578 aa7.58□□□□□ -1.2
CTNND1-229ENST00000531014 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.58□□□□□ -1.2
CTNND1-229ENST00000531014 JARID2Q92833 1246 aaPredicted RBP7.58□□□□□ -1.2
CTNND1-229ENST00000531014 MIEF2Q96C03 454 aa7.58□□□□□ -1.2
CTNND1-229ENST00000531014 CDCA5Q96FF9 252 aa7.58□□□□□ -1.2
CTNND1-229ENST00000531014 ANKRD36BP1Q96IX9 119 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms