RNA–Protein interactions for RNA: ENST00000531007.1

CTNND1-228, Transcript of catenin delta 1, humanhuman

TSL 4

Gene CTNND1, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-228ENST00000531007 C10orf76Q5T2E6 689 aa10.62□□□□□ -0.71
CTNND1-228ENST00000531007 ZNF662Q6ZS27 426 aa10.62□□□□□ -0.71
CTNND1-228ENST00000531007 TRAPPC11Q7Z392 1133 aa10.62□□□□□ -0.71
CTNND1-228ENST00000531007 FAM228AQ86W67 206 aa10.62□□□□□ -0.71
CTNND1-228ENST00000531007 PARP9Q8IXQ6 854 aa10.62□□□□□ -0.71
CTNND1-228ENST00000531007 RSPH1Q8WYR4 309 aa10.62□□□□□ -0.71
CTNND1-228ENST00000531007 ZNF668Q96K58 619 aaPredicted RBP10.62□□□□□ -0.71
CTNND1-228ENST00000531007 CCDC42Q96M95 316 aa10.62□□□□□ -0.71
CTNND1-228ENST00000531007 ZNF830Q96NB3 372 aaPredicted RBP10.62□□□□□ -0.71
CTNND1-228ENST00000531007 TOX2Q96NM4 488 aa10.62□□□□□ -0.71
CTNND1-228ENST00000531007 PPP1R16BQ96T49 567 aa10.62□□□□□ -0.71
CTNND1-228ENST00000531007 FTHL17Q9BXU8 183 aa10.62□□□□□ -0.71
CTNND1-228ENST00000531007 VRTNQ9H8Y1 702 aa10.62□□□□□ -0.71
CTNND1-228ENST00000531007 DNAJC12Q9UKB3 198 aa10.62□□□□□ -0.71
CTNND1-228ENST00000531007 ITGA11Q9UKX5 1188 aa10.62□□□□□ -0.71
CTNND1-228ENST00000531007 ST3GAL5Q9UNP4 418 aa10.62□□□□□ -0.71
CTNND1-228ENST00000531007 NOC2LQ9Y3T9 749 aaKnown RBP10.62□□□□□ -0.71
CTNND1-228ENST00000531007 ATP8B3O60423 1300 aa10.61□□□□□ -0.71
CTNND1-228ENST00000531007 TRIP12Q14669 1992 aaPredicted RBP10.61□□□□□ -0.71
CTNND1-228ENST00000531007 CCDC85CA6NKD9 419 aa10.61□□□□□ -0.71
CTNND1-228ENST00000531007 EIF3CLB5ME19 914 aaKnown RBP10.61□□□□□ -0.71
CTNND1-228ENST00000531007 F8VZ95 297 aa10.61□□□□□ -0.71
CTNND1-228ENST00000531007 EPHB6O15197 1021 aa10.61□□□□□ -0.71
CTNND1-228ENST00000531007 GFRA3O60609 400 aa10.61□□□□□ -0.71
CTNND1-228ENST00000531007 ZNF623O75123 536 aa10.61□□□□□ -0.71
CTNND1-228ENST00000531007 CSDE1O75534 798 aaKnown RBP10.61□□□□□ -0.71
CTNND1-228ENST00000531007 LCA5LO95447 670 aa10.61□□□□□ -0.71
CTNND1-228ENST00000531007 NPTXRO95502 500 aa10.61□□□□□ -0.71
CTNND1-228ENST00000531007 STAU1O95793 577 aaKnown RBP10.61□□□□□ -0.71
CTNND1-228ENST00000531007 P4HA1P13674 534 aa10.61□□□□□ -0.71
CTNND1-228ENST00000531007 KCNE1P15382 129 aa10.61□□□□□ -0.71
CTNND1-228ENST00000531007 CYP3A5P20815 502 aa10.61□□□□□ -0.71
CTNND1-228ENST00000531007 PAX3P23760 479 aa10.61□□□□□ -0.71
CTNND1-228ENST00000531007 SOX5P35711 763 aa10.61□□□□□ -0.71
CTNND1-228ENST00000531007 TNFSF9P41273 254 aa10.61□□□□□ -0.71
CTNND1-228ENST00000531007 PIK3CAP42336 1068 aa10.61□□□□□ -0.71
CTNND1-228ENST00000531007 BPIFB4P59827 614 aa10.61□□□□□ -0.71
CTNND1-228ENST00000531007 YWHAEP62258 255 aaKnown RBP10.61□□□□□ -0.71
CTNND1-228ENST00000531007 NCOA4Q13772 614 aa10.61□□□□□ -0.71
CTNND1-228ENST00000531007 TMEM132DQ14C87 1099 aa10.61□□□□□ -0.71
CTNND1-228ENST00000531007 SLC10A6Q3KNW5 377 aa10.61□□□□□ -0.71
CTNND1-228ENST00000531007 ZBTB41Q5SVQ8 909 aa10.61□□□□□ -0.71
CTNND1-228ENST00000531007 TDRD10Q5VZ19 366 aaKnown RBP10.61□□□□□ -0.71
CTNND1-228ENST00000531007 TWF2Q6IBS0 349 aaKnown RBP10.61□□□□□ -0.71
CTNND1-228ENST00000531007 IQCEQ6IPM2 695 aa10.61□□□□□ -0.71
CTNND1-228ENST00000531007 PHLDB3Q6NSJ2 640 aa10.61□□□□□ -0.71
CTNND1-228ENST00000531007 WDR59Q6PJI9 974 aa10.61□□□□□ -0.71
CTNND1-228ENST00000531007 ANKRD33Q7Z3H0 272 aa10.61□□□□□ -0.71
CTNND1-228ENST00000531007 TAS1R2Q8TE23 839 aa10.61□□□□□ -0.71
CTNND1-228ENST00000531007 TMEM40Q8WWA1 233 aa10.61□□□□□ -0.71
CTNND1-228ENST00000531007 HLA-CQ95604 372 aa10.61□□□□□ -0.71
CTNND1-228ENST00000531007 SNX27Q96L92 541 aa10.61□□□□□ -0.71
CTNND1-228ENST00000531007 POP1Q99575 1024 aaKnown RBP10.61□□□□□ -0.71
CTNND1-228ENST00000531007 EIF3CQ99613 913 aaKnown RBP10.61□□□□□ -0.71
CTNND1-228ENST00000531007 DEF6Q9H4E7 631 aa10.61□□□□□ -0.71
CTNND1-228ENST00000531007 NHEJ1Q9H9Q4 299 aaPredicted RBP10.61□□□□□ -0.71
CTNND1-228ENST00000531007 ERVK-5Q9HDB9 667 aa10.61□□□□□ -0.71
CTNND1-228ENST00000531007 UBE2TQ9NPD8 197 aaPredicted RBP10.61□□□□□ -0.71
CTNND1-228ENST00000531007 NLRC4Q9NPP4 1024 aa10.61□□□□□ -0.71
CTNND1-228ENST00000531007 TRMT13Q9NUP7 481 aaKnown RBP10.61□□□□□ -0.71
CTNND1-228ENST00000531007 SPTLC3Q9NUV7 552 aa10.61□□□□□ -0.71
CTNND1-228ENST00000531007 CNTN3Q9P232 1028 aa10.61□□□□□ -0.71
CTNND1-228ENST00000531007 EPN1Q9Y6I3 576 aaPredicted RBP10.61□□□□□ -0.71
CTNND1-228ENST00000531007 LACTBL1A8MY62 500 aa10.6□□□□□ -0.71
CTNND1-228ENST00000531007 RNF225M0QZC1 329 aaPredicted RBP10.6□□□□□ -0.71
CTNND1-228ENST00000531007 NDUFA10O95299 355 aa10.6□□□□□ -0.71
CTNND1-228ENST00000531007 ASS1P00966 412 aaKnown RBP10.6□□□□□ -0.71
CTNND1-228ENST00000531007 CD4P01730 458 aa10.6□□□□□ -0.71
CTNND1-228ENST00000531007 HLA-DRAP01903 254 aa10.6□□□□□ -0.71
CTNND1-228ENST00000531007 TFRCP02786 760 aaKnown RBP10.6□□□□□ -0.71
CTNND1-228ENST00000531007 CXCL8P10145 99 aa10.6□□□□□ -0.71
CTNND1-228ENST00000531007 COL6A1P12109 1028 aa10.6□□□□□ -0.71
CTNND1-228ENST00000531007 CKBP12277 381 aa10.6□□□□□ -0.71
CTNND1-228ENST00000531007 ACTN1P12814 892 aa10.6□□□□□ -0.71
CTNND1-228ENST00000531007 SELPP16109 830 aa10.6□□□□□ -0.71
CTNND1-228ENST00000531007 ATF7P17544 494 aaPredicted RBP10.6□□□□□ -0.71
CTNND1-228ENST00000531007 GJA8P48165 433 aa10.6□□□□□ -0.71
CTNND1-228ENST00000531007 RBP5P82980 135 aa10.6□□□□□ -0.71
CTNND1-228ENST00000531007 TFAMQ00059 246 aaKnown RBP10.6□□□□□ -0.71
CTNND1-228ENST00000531007 KLHL30Q0D2K2 578 aa10.6□□□□□ -0.71
CTNND1-228ENST00000531007 RAPGEF1Q13905 1077 aa10.6□□□□□ -0.71
CTNND1-228ENST00000531007 DRAP1Q14919 205 aaPredicted RBP10.6□□□□□ -0.71
CTNND1-228ENST00000531007 MTFR1Q15390 333 aa10.6□□□□□ -0.71
CTNND1-228ENST00000531007 SPA17Q15506 151 aa10.6□□□□□ -0.71
CTNND1-228ENST00000531007 ALKAL1Q6UXT8 129 aa10.6□□□□□ -0.71
CTNND1-228ENST00000531007 ZNF677Q86XU0 584 aa10.6□□□□□ -0.71
CTNND1-228ENST00000531007 FAM126BQ8IXS8 530 aa10.6□□□□□ -0.71
CTNND1-228ENST00000531007 CCAR2Q8N163 923 aaKnown RBP10.6□□□□□ -0.71
CTNND1-228ENST00000531007 PPM1KQ8N3J5 372 aa10.6□□□□□ -0.71
CTNND1-228ENST00000531007 BEST2Q8NFU1 509 aa10.6□□□□□ -0.71
CTNND1-228ENST00000531007 HELQQ8TDG4 1101 aa10.6□□□□□ -0.71
CTNND1-228ENST00000531007 U2AF1L4Q8WU68 220 aaKnown RBP10.6□□□□□ -0.71
CTNND1-228ENST00000531007 SHC3Q92529 594 aa10.6□□□□□ -0.71
CTNND1-228ENST00000531007 PGBD4Q96DM1 585 aa10.6□□□□□ -0.71
CTNND1-228ENST00000531007 USB1Q9BQ65 265 aaKnown RBP10.6□□□□□ -0.71
CTNND1-228ENST00000531007 PRDM9Q9NQV7 894 aa10.6□□□□□ -0.71
CTNND1-228ENST00000531007 SLC38A7Q9NVC3 462 aa10.6□□□□□ -0.71
CTNND1-228ENST00000531007 UBQLN1Q9UMX0 589 aaKnown RBP10.6□□□□□ -0.71
CTNND1-228ENST00000531007 FCF1Q9Y324 198 aaKnown RBP10.6□□□□□ -0.71
CTNND1-228ENST00000531007 FHOD1Q9Y613 1164 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms