RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 TBC1D32Q96NH3 1257 aa17.26■□□□□ 0.35
CHMP4A-204ENST00000530996 OSBPL6Q9BZF3 934 aa17.26■□□□□ 0.35
CHMP4A-204ENST00000530996 PLA2G2FQ9BZM2 168 aa17.26■□□□□ 0.35
CHMP4A-204ENST00000530996 ZFP14Q9HCL3 533 aa17.26■□□□□ 0.35
CHMP4A-204ENST00000530996 AVENQ9NQS1 362 aaPredicted RBP17.26■□□□□ 0.35
CHMP4A-204ENST00000530996 ASAH2Q9NR71 780 aa17.26■□□□□ 0.35
CHMP4A-204ENST00000530996 FBXO4Q9UKT5 387 aa17.26■□□□□ 0.35
CHMP4A-204ENST00000530996 NDRG2Q9UN36 371 aaKnown RBP17.26■□□□□ 0.35
CHMP4A-204ENST00000530996 VWA3AA6NCI4 1184 aa17.25■□□□□ 0.35
CHMP4A-204ENST00000530996 ABLIM1O14639 778 aa17.25■□□□□ 0.35
CHMP4A-204ENST00000530996 CLDN3O15551 220 aa17.25■□□□□ 0.35
CHMP4A-204ENST00000530996 PPP2R3AQ06190 1150 aa17.25■□□□□ 0.35
CHMP4A-204ENST00000530996 SPAG1Q07617 926 aa17.25■□□□□ 0.35
CHMP4A-204ENST00000530996 IL17AQ16552 155 aa17.25■□□□□ 0.35
CHMP4A-204ENST00000530996 RILPL1Q5EBL4 403 aa17.25■□□□□ 0.35
CHMP4A-204ENST00000530996 MAML2Q8IZL2 1156 aaPredicted RBP17.25■□□□□ 0.35
CHMP4A-204ENST00000530996 TMEM161BQ8NDZ6 487 aa17.25■□□□□ 0.35
CHMP4A-204ENST00000530996 DDX12PQ92771 950 aa17.25■□□□□ 0.35
CHMP4A-204ENST00000530996 DNASE1L2Q92874 299 aa17.25■□□□□ 0.35
CHMP4A-204ENST00000530996 RMDN1Q96DB5 314 aa17.25■□□□□ 0.35
CHMP4A-204ENST00000530996 KIF12Q96FN5 646 aa17.25■□□□□ 0.35
CHMP4A-204ENST00000530996 ZNF512Q96ME7 567 aaPredicted RBP17.25■□□□□ 0.35
CHMP4A-204ENST00000530996 MMTAG2Q9BU76 263 aaKnown RBP17.25■□□□□ 0.35
CHMP4A-204ENST00000530996 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.25■□□□□ 0.35
CHMP4A-204ENST00000530996 AFF4Q9UHB7 1163 aaKnown RBP17.25■□□□□ 0.35
CHMP4A-204ENST00000530996 PCDHB8Q9UN66 801 aa17.25■□□□□ 0.35
CHMP4A-204ENST00000530996 SPTBN4Q9H254 2564 aa17.24■□□□□ 0.35
CHMP4A-204ENST00000530996 H3BQV1 296 aa17.24■□□□□ 0.35
CHMP4A-204ENST00000530996 MAPTP10636 758 aaKnown RBP17.24■□□□□ 0.35
CHMP4A-204ENST00000530996 FCARP24071 287 aa17.24■□□□□ 0.35
CHMP4A-204ENST00000530996 LIG4P49917 911 aa17.24■□□□□ 0.35
CHMP4A-204ENST00000530996 YWHAHQ04917 246 aaPredicted RBP17.24■□□□□ 0.35
CHMP4A-204ENST00000530996 ZNF528Q3MIS6 628 aa17.24■□□□□ 0.35
CHMP4A-204ENST00000530996 FAM78AQ5JUQ0 283 aa17.24■□□□□ 0.35
CHMP4A-204ENST00000530996 PRSS36Q5K4E3 855 aa17.24■□□□□ 0.35
CHMP4A-204ENST00000530996 ERICH6BQ5W0A0 696 aa17.24■□□□□ 0.35
CHMP4A-204ENST00000530996 DGLUCYQ7Z3D6 616 aa17.24■□□□□ 0.35
CHMP4A-204ENST00000530996 USP37Q86T82 979 aa17.24■□□□□ 0.35
CHMP4A-204ENST00000530996 HS6ST3Q8IZP7 471 aa17.24■□□□□ 0.35
CHMP4A-204ENST00000530996 DCLK2Q8N568 766 aa17.24■□□□□ 0.35
CHMP4A-204ENST00000530996 RASSF8Q8NHQ8 419 aa17.24■□□□□ 0.35
CHMP4A-204ENST00000530996 SPIRE2Q8WWL2 714 aa17.24■□□□□ 0.35
CHMP4A-204ENST00000530996 TRMT61BQ9BVS5 477 aaKnown RBP17.24■□□□□ 0.35
CHMP4A-204ENST00000530996 YIPF1Q9Y548 306 aa17.24■□□□□ 0.35
CHMP4A-204ENST00000530996 PCDHGA2Q9Y5H1 932 aa17.24■□□□□ 0.35
CHMP4A-204ENST00000530996 NPHP3-ACAD11A0A0J9YXS1 232 aa17.23■□□□□ 0.35
CHMP4A-204ENST00000530996 H0YCG3 227 aa17.23■□□□□ 0.35
CHMP4A-204ENST00000530996 K7ENM7 598 aa17.23■□□□□ 0.35
CHMP4A-204ENST00000530996 HNRNPDLO14979 420 aaKnown RBP17.23■□□□□ 0.35
CHMP4A-204ENST00000530996 PLA2G4BP0C869 781 aa17.23■□□□□ 0.35
CHMP4A-204ENST00000530996 GJA1P17302 382 aa17.23■□□□□ 0.35
CHMP4A-204ENST00000530996 GDI1P31150 447 aa17.23■□□□□ 0.35
CHMP4A-204ENST00000530996 CCR2P41597 374 aa17.23■□□□□ 0.35
CHMP4A-204ENST00000530996 ATP2C1P98194 919 aaPredicted RBP17.23■□□□□ 0.35
CHMP4A-204ENST00000530996 MCL1Q07820 350 aa17.23■□□□□ 0.35
CHMP4A-204ENST00000530996 SLC10A6Q3KNW5 377 aa17.23■□□□□ 0.35
CHMP4A-204ENST00000530996 ZPBP2Q6X784 338 aa17.23■□□□□ 0.35
CHMP4A-204ENST00000530996 DSTYKQ6XUX3 929 aa17.23■□□□□ 0.35
CHMP4A-204ENST00000530996 RNF19BQ6ZMZ0 732 aa17.23■□□□□ 0.35
CHMP4A-204ENST00000530996 TMEM130Q8N3G9 435 aa17.23■□□□□ 0.35
CHMP4A-204ENST00000530996 SECISBP2LQ93073 1101 aaKnown RBP17.23■□□□□ 0.35
CHMP4A-204ENST00000530996 ASB16Q96NS5 453 aa17.23■□□□□ 0.35
CHMP4A-204ENST00000530996 PGLYRP2Q96PD5 576 aa17.23■□□□□ 0.35
CHMP4A-204ENST00000530996 NELL2Q99435 816 aa17.23■□□□□ 0.35
CHMP4A-204ENST00000530996 LARSQ9P2J5 1176 aaKnown RBP17.23■□□□□ 0.35
CHMP4A-204ENST00000530996 KCNG1Q9UIX4 513 aa17.23■□□□□ 0.35
CHMP4A-204ENST00000530996 SMG5Q9UPR3 1016 aaKnown RBP17.23■□□□□ 0.35
CHMP4A-204ENST00000530996 TIMM13Q9Y5L4 95 aaPredicted RBP17.23■□□□□ 0.35
CHMP4A-204ENST00000530996 MEFVO15553 781 aaPredicted RBP17.22■□□□□ 0.35
CHMP4A-204ENST00000530996 XPOTO43592 962 aaKnown RBP17.22■□□□□ 0.35
CHMP4A-204ENST00000530996 TBC1D4O60343 1298 aa17.22■□□□□ 0.35
CHMP4A-204ENST00000530996 KRT18P05783 430 aaKnown RBP17.22■□□□□ 0.35
CHMP4A-204ENST00000530996 CLTAP09496 248 aa17.22■□□□□ 0.35
CHMP4A-204ENST00000530996 OR4Q2P0C623 313 aa17.22■□□□□ 0.35
CHMP4A-204ENST00000530996 RPS9P46781 194 aaKnown RBP17.22■□□□□ 0.35
CHMP4A-204ENST00000530996 PLD1Q13393 1074 aa17.22■□□□□ 0.35
CHMP4A-204ENST00000530996 MRPL58Q14197 206 aaKnown RBP17.22■□□□□ 0.35
CHMP4A-204ENST00000530996 DHX8Q14562 1220 aaKnown RBP17.22■□□□□ 0.35
CHMP4A-204ENST00000530996 TSSK4Q6SA08 328 aa17.22■□□□□ 0.35
CHMP4A-204ENST00000530996 GPBP1Q86WP2 473 aa17.22■□□□□ 0.35
CHMP4A-204ENST00000530996 YAF2Q8IY57 180 aa17.22■□□□□ 0.35
CHMP4A-204ENST00000530996 SYT2Q8N9I0 419 aaPredicted RBP17.22■□□□□ 0.35
CHMP4A-204ENST00000530996 LEMD2Q8NC56 503 aa17.22■□□□□ 0.35
CHMP4A-204ENST00000530996 ZSCAN18Q8TBC5 510 aaPredicted RBP17.22■□□□□ 0.35
CHMP4A-204ENST00000530996 SMARCD2Q92925 531 aa17.22■□□□□ 0.35
CHMP4A-204ENST00000530996 IRF7Q92985 503 aa17.22■□□□□ 0.35
CHMP4A-204ENST00000530996 FAM212AQ96EL1 285 aa17.22■□□□□ 0.35
CHMP4A-204ENST00000530996 PNMA5Q96PV4 448 aa17.22■□□□□ 0.35
CHMP4A-204ENST00000530996 ZSCAN32Q9NX65 697 aa17.22■□□□□ 0.35
CHMP4A-204ENST00000530996 KCND2Q9NZV8 630 aa17.22■□□□□ 0.35
CHMP4A-204ENST00000530996 CEP72Q9P209 647 aa17.22■□□□□ 0.35
CHMP4A-204ENST00000530996 UBQLN1Q9UMX0 589 aaKnown RBP17.22■□□□□ 0.35
CHMP4A-204ENST00000530996 PIAS3Q9Y6X2 628 aa17.22■□□□□ 0.35
CHMP4A-204ENST00000530996 MAN2B1O00754 1011 aa17.21■□□□□ 0.35
CHMP4A-204ENST00000530996 FAM13AO94988 1023 aa17.21■□□□□ 0.35
CHMP4A-204ENST00000530996 PSMC3P17980 439 aa17.21■□□□□ 0.35
CHMP4A-204ENST00000530996 TNFSF9P41273 254 aa17.21■□□□□ 0.35
CHMP4A-204ENST00000530996 VIPR2P41587 438 aa17.21■□□□□ 0.35
CHMP4A-204ENST00000530996 GUCY2FP51841 1108 aa17.21■□□□□ 0.35
CHMP4A-204ENST00000530996 SLC12A3P55017 1021 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms