RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 RFFLQ8WZ73 363 aa8.6□□□□□ -1.03
CSDE1-214ENST00000530886 ZMAT2Q96NC0 199 aaKnown RBP8.6□□□□□ -1.03
CSDE1-214ENST00000530886 SRPK1Q96SB4 655 aaKnown RBP8.6□□□□□ -1.03
CSDE1-214ENST00000530886 GBA3Q9H227 469 aa8.6□□□□□ -1.03
CSDE1-214ENST00000530886 RNF41Q9H4P4 317 aaPredicted RBP8.6□□□□□ -1.03
CSDE1-214ENST00000530886 BLOC1S4Q9NUP1 217 aa8.6□□□□□ -1.03
CSDE1-214ENST00000530886 MTO1Q9Y2Z2 717 aaKnown RBP8.6□□□□□ -1.03
CSDE1-214ENST00000530886 AK5Q9Y6K8 562 aa8.6□□□□□ -1.03
CSDE1-214ENST00000530886 SBF2Q86WG5 1849 aa8.6□□□□□ -1.03
CSDE1-214ENST00000530886 C15orf38-AP3S2A0A0A6YYH1 394 aa8.6□□□□□ -1.03
CSDE1-214ENST00000530886 NPHP3-ACAD11A0A0J9YXS1 232 aa8.6□□□□□ -1.03
CSDE1-214ENST00000530886 PDE8AO60658 829 aa8.6□□□□□ -1.03
CSDE1-214ENST00000530886 IDH1O75874 414 aaKnown RBP8.6□□□□□ -1.03
CSDE1-214ENST00000530886 ITIH2P19823 946 aa8.6□□□□□ -1.03
CSDE1-214ENST00000530886 CALML3P27482 149 aa8.6□□□□□ -1.03
CSDE1-214ENST00000530886 PGM1P36871 562 aa8.6□□□□□ -1.03
CSDE1-214ENST00000530886 PHKA1P46020 1223 aa8.6□□□□□ -1.03
CSDE1-214ENST00000530886 RPS3AP61247 264 aaKnown RBP8.6□□□□□ -1.03
CSDE1-214ENST00000530886 CYP4A11Q02928 519 aa8.6□□□□□ -1.03
CSDE1-214ENST00000530886 EXOC3L4Q17RC7 722 aa8.6□□□□□ -1.03
CSDE1-214ENST00000530886 MYLK3Q32MK0 819 aa8.6□□□□□ -1.03
CSDE1-214ENST00000530886 RIPOR1Q6ZS17 1223 aa8.6□□□□□ -1.03
CSDE1-214ENST00000530886 ARPINQ7Z6K5 226 aa8.6□□□□□ -1.03
CSDE1-214ENST00000530886 ANKK1Q8NFD2 765 aa8.6□□□□□ -1.03
CSDE1-214ENST00000530886 UHMK1Q8TAS1 419 aaKnown RBP8.6□□□□□ -1.03
CSDE1-214ENST00000530886 ZCRB1Q8TBF4 217 aaKnown RBP8.6□□□□□ -1.03
CSDE1-214ENST00000530886 PANX3Q96QZ0 392 aa8.6□□□□□ -1.03
CSDE1-214ENST00000530886 UNKQ9C0B0 810 aaKnown RBP8.6□□□□□ -1.03
CSDE1-214ENST00000530886 C1orf21Q9H246 121 aa8.6□□□□□ -1.03
CSDE1-214ENST00000530886 TPK1Q9H3S4 243 aa8.6□□□□□ -1.03
CSDE1-214ENST00000530886 DDX18Q9NVP1 670 aaKnown RBP8.6□□□□□ -1.03
CSDE1-214ENST00000530886 PPP1R1BQ9UD71 204 aaPredicted RBP8.6□□□□□ -1.03
CSDE1-214ENST00000530886 TDRKHQ9Y2W6 561 aaKnown RBP8.6□□□□□ -1.03
CSDE1-214ENST00000530886 PCDHA2Q9Y5H9 948 aa8.6□□□□□ -1.03
CSDE1-214ENST00000530886 CEPT1Q9Y6K0 416 aa8.6□□□□□ -1.03
CSDE1-214ENST00000530886 SPDYE16A6NNV3 312 aaPredicted RBP8.6□□□□□ -1.03
CSDE1-214ENST00000530886 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.6□□□□□ -1.03
CSDE1-214ENST00000530886 ADCY3O60266 1144 aa8.6□□□□□ -1.03
CSDE1-214ENST00000530886 DDAH1O94760 285 aa8.6□□□□□ -1.03
CSDE1-214ENST00000530886 BAIAP3O94812 1187 aa8.6□□□□□ -1.03
CSDE1-214ENST00000530886 PCSK6P29122 969 aa8.6□□□□□ -1.03
CSDE1-214ENST00000530886 JAM2P57087 298 aa8.6□□□□□ -1.03
CSDE1-214ENST00000530886 CDK16Q00536 496 aa8.6□□□□□ -1.03
CSDE1-214ENST00000530886 FKBP3Q00688 224 aaKnown RBP8.6□□□□□ -1.03
CSDE1-214ENST00000530886 TMEM266Q2M3C6 531 aa8.6□□□□□ -1.03
CSDE1-214ENST00000530886 SFT2D3Q587I9 215 aa8.6□□□□□ -1.03
CSDE1-214ENST00000530886 PLEKHG4Q58EX7 1191 aa8.6□□□□□ -1.03
CSDE1-214ENST00000530886 RWDD4Q6NW29 188 aaKnown RBP8.6□□□□□ -1.03
CSDE1-214ENST00000530886 SYDE1Q6ZW31 735 aaPredicted RBP8.6□□□□□ -1.03
CSDE1-214ENST00000530886 PEX5LQ8IYB4 626 aa8.6□□□□□ -1.03
CSDE1-214ENST00000530886 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.6□□□□□ -1.03
CSDE1-214ENST00000530886 DAGLBQ8NCG7 672 aa8.6□□□□□ -1.03
CSDE1-214ENST00000530886 GLIS3Q8NEA6 775 aa8.6□□□□□ -1.03
CSDE1-214ENST00000530886 HELBQ8NG08 1087 aaPredicted RBP8.6□□□□□ -1.03
CSDE1-214ENST00000530886 SREK1Q8WXA9 508 aaKnown RBP8.6□□□□□ -1.03
CSDE1-214ENST00000530886 STARD8Q92502 1023 aa8.6□□□□□ -1.03
CSDE1-214ENST00000530886 NEURL2Q9BR09 285 aa8.6□□□□□ -1.03
CSDE1-214ENST00000530886 PPCSQ9HAB8 311 aa8.6□□□□□ -1.03
CSDE1-214ENST00000530886 TRPC7Q9HCX4 862 aa8.6□□□□□ -1.03
CSDE1-214ENST00000530886 S100A14Q9HCY8 104 aa8.6□□□□□ -1.03
CSDE1-214ENST00000530886 SLCO1B3Q9NPD5 702 aa8.6□□□□□ -1.03
CSDE1-214ENST00000530886 HERC5Q9UII4 1024 aaKnown RBP8.6□□□□□ -1.03
CSDE1-214ENST00000530886 GRID1Q9ULK0 1009 aa8.6□□□□□ -1.03
CSDE1-214ENST00000530886 POLIQ9UNA4 740 aa8.6□□□□□ -1.03
CSDE1-214ENST00000530886 TIMM22Q9Y584 194 aa8.6□□□□□ -1.03
CSDE1-214ENST00000530886 FOCADQ5VW36 1801 aa8.59□□□□□ -1.03
CSDE1-214ENST00000530886 ZBED4O75132 1171 aa8.59□□□□□ -1.03
CSDE1-214ENST00000530886 SPAG7O75391 227 aa8.59□□□□□ -1.03
CSDE1-214ENST00000530886 CIB2O75838 187 aa8.59□□□□□ -1.03
CSDE1-214ENST00000530886 CETPP11597 493 aa8.59□□□□□ -1.03
CSDE1-214ENST00000530886 CYP2C9P11712 490 aa8.59□□□□□ -1.03
CSDE1-214ENST00000530886 CDH2P19022 906 aaPredicted RBP8.59□□□□□ -1.03
CSDE1-214ENST00000530886 PPARGP37231 505 aaPredicted RBP8.59□□□□□ -1.03
CSDE1-214ENST00000530886 PHKA2P46019 1235 aa8.59□□□□□ -1.03
CSDE1-214ENST00000530886 IRX4P78413 519 aa8.59□□□□□ -1.03
CSDE1-214ENST00000530886 NDUFA5Q16718 116 aa8.59□□□□□ -1.03
CSDE1-214ENST00000530886 DNAL1Q4LDG9 190 aa8.59□□□□□ -1.03
CSDE1-214ENST00000530886 CCDC137Q6PK04 289 aaKnown RBP8.59□□□□□ -1.03
CSDE1-214ENST00000530886 VPS36Q86VN1 386 aa8.59□□□□□ -1.03
CSDE1-214ENST00000530886 SCYL3Q8IZE3 742 aa8.59□□□□□ -1.03
CSDE1-214ENST00000530886 LZTR1Q8N653 840 aa8.59□□□□□ -1.03
CSDE1-214ENST00000530886 CEP70Q8NHQ1 597 aa8.59□□□□□ -1.03
CSDE1-214ENST00000530886 OSBPL6Q9BZF3 934 aa8.59□□□□□ -1.03
CSDE1-214ENST00000530886 LRRC27Q9C0I9 530 aa8.59□□□□□ -1.03
CSDE1-214ENST00000530886 ARMT1Q9H993 441 aa8.59□□□□□ -1.03
CSDE1-214ENST00000530886 ROBO1Q9Y6N7 1651 aa8.59□□□□□ -1.03
CSDE1-214ENST00000530886 OXSR1O95747 527 aaPredicted RBP8.59□□□□□ -1.03
CSDE1-214ENST00000530886 GCP02774 474 aa8.59□□□□□ -1.03
CSDE1-214ENST00000530886 PLCG2P16885 1265 aa8.59□□□□□ -1.03
CSDE1-214ENST00000530886 NFKBIAP25963 317 aa8.59□□□□□ -1.03
CSDE1-214ENST00000530886 COILP38432 576 aaPredicted RBP8.59□□□□□ -1.03
CSDE1-214ENST00000530886 BCAP31P51572 246 aa8.59□□□□□ -1.03
CSDE1-214ENST00000530886 NR1H2P55055 460 aa8.59□□□□□ -1.03
CSDE1-214ENST00000530886 SNRNP48Q6IEG0 339 aaKnown RBP8.59□□□□□ -1.03
CSDE1-214ENST00000530886 C11orf63Q6NUN7 778 aa8.59□□□□□ -1.03
CSDE1-214ENST00000530886 SAPCD2Q86UD0 394 aa8.59□□□□□ -1.03
CSDE1-214ENST00000530886 CABP7Q86V35 215 aa8.59□□□□□ -1.03
CSDE1-214ENST00000530886 SRRM1Q8IYB3 904 aaKnown RBP8.59□□□□□ -1.03
CSDE1-214ENST00000530886 CCDC77Q9BR77 488 aa8.59□□□□□ -1.03
CSDE1-214ENST00000530886 NAPBQ9H115 298 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms