RNA–Protein interactions for RNA: ENST00000530640.6

CTSB-219, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTSB, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-219ENST00000530640 SYCE2Q6PIF2 218 aa16.91■□□□□ 0.3
CTSB-219ENST00000530640 MPZL3Q6UWV2 235 aa16.91■□□□□ 0.3
CTSB-219ENST00000530640 UBALD2Q8IYN6 164 aa16.91■□□□□ 0.3
CTSB-219ENST00000530640 XXYLT1Q8NBI6 393 aa16.91■□□□□ 0.3
CTSB-219ENST00000530640 VN1R2Q8NFZ6 395 aa16.91■□□□□ 0.3
CTSB-219ENST00000530640 POMGNT1Q8WZA1 660 aa16.91■□□□□ 0.3
CTSB-219ENST00000530640 BORCS6Q96GS4 357 aa16.91■□□□□ 0.3
CTSB-219ENST00000530640 ZBTB45Q96K62 511 aaPredicted RBP16.91■□□□□ 0.3
CTSB-219ENST00000530640 ADAM7Q9H2U9 754 aa16.91■□□□□ 0.3
CTSB-219ENST00000530640 NRDE2Q9H7Z3 1164 aa16.91■□□□□ 0.3
CTSB-219ENST00000530640 UBN1Q9NPG3 1134 aa16.91■□□□□ 0.3
CTSB-219ENST00000530640 IPPQ9Y573 584 aa16.91■□□□□ 0.3
CTSB-219ENST00000530640 A0A1B0GUA9 196 aa16.9■□□□□ 0.3
CTSB-219ENST00000530640 N4BP3O15049 544 aa16.9■□□□□ 0.3
CTSB-219ENST00000530640 CA8P35219 290 aa16.9■□□□□ 0.3
CTSB-219ENST00000530640 MCCD1P59942 119 aaPredicted RBP16.9■□□□□ 0.3
CTSB-219ENST00000530640 NOLC1Q14978 699 aaKnown RBP eCLIP16.9■□□□□ 0.34e-15■□□□□ 10.7
CTSB-219ENST00000530640 KRT31Q15323 416 aa16.9■□□□□ 0.3
CTSB-219ENST00000530640 ZNF568Q3ZCX4 644 aa16.9■□□□□ 0.3
CTSB-219ENST00000530640 EEF1DP3Q658K8 133 aa16.9■□□□□ 0.3
CTSB-219ENST00000530640 HACE1Q8IYU2 909 aa16.9■□□□□ 0.3
CTSB-219ENST00000530640 SMG8Q8ND04 991 aaKnown RBP16.9■□□□□ 0.3
CTSB-219ENST00000530640 ZSWIM2Q8NEG5 633 aa16.9■□□□□ 0.3
CTSB-219ENST00000530640 FAM193BQ96PV7 902 aaPredicted RBP16.9■□□□□ 0.3
CTSB-219ENST00000530640 CDT1Q9H211 546 aa16.9■□□□□ 0.3
CTSB-219ENST00000530640 KANSL3Q9P2N6 904 aa16.9■□□□□ 0.3
CTSB-219ENST00000530640 DNAJB4Q9UDY4 337 aa16.9■□□□□ 0.3
CTSB-219ENST00000530640 LIMA1Q9UHB6 759 aaKnown RBP16.9■□□□□ 0.3
CTSB-219ENST00000530640 IRAK3Q9Y616 596 aa16.9■□□□□ 0.3
CTSB-219ENST00000530640 ZDBF2Q9HCK1 2354 aa16.9■□□□□ 0.3
CTSB-219ENST00000530640 LRRC10BA6NIK2 292 aa16.89■□□□□ 0.3
CTSB-219ENST00000530640 HIDE1A8MVS5 230 aa16.89■□□□□ 0.3
CTSB-219ENST00000530640 CLDN3O15551 220 aa16.89■□□□□ 0.3
CTSB-219ENST00000530640 EXOC3O60645 756 aa16.89■□□□□ 0.3
CTSB-219ENST00000530640 GALTP07902 379 aa16.89■□□□□ 0.3
CTSB-219ENST00000530640 EPB41P11171 864 aaKnown RBP16.89■□□□□ 0.3
CTSB-219ENST00000530640 MLH1P40692 756 aa16.89■□□□□ 0.3
CTSB-219ENST00000530640 MTHFRP42898 656 aa16.89■□□□□ 0.3
CTSB-219ENST00000530640 CEP135Q66GS9 1140 aa16.89■□□□□ 0.3
CTSB-219ENST00000530640 SLC27A1Q6PCB7 646 aa16.89■□□□□ 0.3
CTSB-219ENST00000530640 FRMD5Q7Z6J6 570 aa16.89■□□□□ 0.3
CTSB-219ENST00000530640 ZBTB33Q86T24 672 aa16.89■□□□□ 0.3
CTSB-219ENST00000530640 TMEM173Q86WV6 379 aaPredicted RBP16.89■□□□□ 0.3
CTSB-219ENST00000530640 TRIM59Q8IWR1 403 aa16.89■□□□□ 0.3
CTSB-219ENST00000530640 GPD1LQ8N335 351 aa16.89■□□□□ 0.3
CTSB-219ENST00000530640 SAAL1Q96ER3 474 aa16.89■□□□□ 0.3
CTSB-219ENST00000530640 ASIC4Q96FT7 647 aa16.89■□□□□ 0.3
CTSB-219ENST00000530640 IGSF21Q96ID5 467 aa16.89■□□□□ 0.3
CTSB-219ENST00000530640 RIPOR3Q96MK2 946 aa16.89■□□□□ 0.3
CTSB-219ENST00000530640 APOL6Q9BWW8 343 aa16.89■□□□□ 0.3
CTSB-219ENST00000530640 NXF3Q9H4D5 531 aaKnown RBP16.89■□□□□ 0.3
CTSB-219ENST00000530640 PCIF1Q9H4Z3 704 aa16.89■□□□□ 0.3
CTSB-219ENST00000530640 DZANK1Q9NVP4 752 aa16.89■□□□□ 0.3
CTSB-219ENST00000530640 AGO2Q9UKV8 859 aaKnown RBP16.89■□□□□ 0.3
CTSB-219ENST00000530640 HES2Q9Y543 173 aa16.89■□□□□ 0.3
CTSB-219ENST00000530640 C2orf71A6NGG8 1288 aa16.89■□□□□ 0.29
CTSB-219ENST00000530640 EXTL3O43909 919 aa16.89■□□□□ 0.29
CTSB-219ENST00000530640 B4GALT3O60512 393 aa16.89■□□□□ 0.29
CTSB-219ENST00000530640 NPTXRO95502 500 aa16.89■□□□□ 0.29
CTSB-219ENST00000530640 POMCP01189 267 aa16.89■□□□□ 0.29
CTSB-219ENST00000530640 ADRB2P07550 413 aa16.89■□□□□ 0.29
CTSB-219ENST00000530640 MCF2P10911 925 aa16.89■□□□□ 0.29
CTSB-219ENST00000530640 AVPR2P30518 371 aa16.89■□□□□ 0.29
CTSB-219ENST00000530640 PSMC2P35998 433 aaKnown RBP16.89■□□□□ 0.29
CTSB-219ENST00000530640 SLC11A1P49279 550 aa16.89■□□□□ 0.29
CTSB-219ENST00000530640 AFF1P51825 1210 aaKnown RBP16.89■□□□□ 0.29
CTSB-219ENST00000530640 FANCCQ00597 558 aa16.89■□□□□ 0.29
CTSB-219ENST00000530640 SNRNP35Q16560 246 aaKnown RBP16.89■□□□□ 0.29
CTSB-219ENST00000530640 TMEM132AQ24JP5 1023 aa16.89■□□□□ 0.29
CTSB-219ENST00000530640 CRELD2Q6UXH1 353 aaPredicted RBP16.89■□□□□ 0.29
CTSB-219ENST00000530640 CDR2LQ86X02 465 aaPredicted RBP16.89■□□□□ 0.29
CTSB-219ENST00000530640 ZNF280BQ86YH2 543 aa16.89■□□□□ 0.29
CTSB-219ENST00000530640 CBWD2Q8IUF1 395 aa16.89■□□□□ 0.29
CTSB-219ENST00000530640 FAM186BQ8IYM0 893 aa16.89■□□□□ 0.29
CTSB-219ENST00000530640 PLCD3Q8N3E9 789 aa16.89■□□□□ 0.29
CTSB-219ENST00000530640 PRSS33Q8NF86 280 aa16.89■□□□□ 0.29
CTSB-219ENST00000530640 MSTO1Q9BUK6 570 aa16.89■□□□□ 0.29
CTSB-219ENST00000530640 METTL14Q9HCE5 456 aaKnown RBP16.89■□□□□ 0.29
CTSB-219ENST00000530640 MAGEC2Q9UBF1 373 aaPredicted RBP16.89■□□□□ 0.29
CTSB-219ENST00000530640 FRMD4BQ9Y2L6 1034 aa16.89■□□□□ 0.29
CTSB-219ENST00000530640 ANK1P16157 1881 aa16.88■□□□□ 0.29
CTSB-219ENST00000530640 A0A1B0GTH6 734 aa16.88■□□□□ 0.29
CTSB-219ENST00000530640 OGTO15294 1046 aa16.88■□□□□ 0.29
CTSB-219ENST00000530640 DDHD2O94830 711 aa16.88■□□□□ 0.29
CTSB-219ENST00000530640 RBM10P98175 930 aaKnown RBP16.88■□□□□ 0.29
CTSB-219ENST00000530640 ENPEPQ07075 957 aa16.88■□□□□ 0.29
CTSB-219ENST00000530640 MTMR3Q13615 1198 aa16.88■□□□□ 0.29
CTSB-219ENST00000530640 HSP90AA2PQ14568 343 aaPredicted RBP16.88■□□□□ 0.29
CTSB-219ENST00000530640 DCAF4L1Q3SXM0 396 aa16.88■□□□□ 0.29
CTSB-219ENST00000530640 CCDC40Q4G0X9 1142 aa16.88■□□□□ 0.29
CTSB-219ENST00000530640 MIIPQ5JXC2 388 aa16.88■□□□□ 0.29
CTSB-219ENST00000530640 ZBTB41Q5SVQ8 909 aa16.88■□□□□ 0.29
CTSB-219ENST00000530640 PPFIBP1Q86W92 1011 aa16.88■□□□□ 0.29
CTSB-219ENST00000530640 VPS52Q8N1B4 723 aa16.88■□□□□ 0.29
CTSB-219ENST00000530640 BCL7CQ8WUZ0 217 aaPredicted RBP16.88■□□□□ 0.29
CTSB-219ENST00000530640 GAD1Q99259 594 aa16.88■□□□□ 0.29
CTSB-219ENST00000530640 TMEM175Q9BSA9 504 aa16.88■□□□□ 0.29
CTSB-219ENST00000530640 ZBP1Q9H171 429 aa16.88■□□□□ 0.29
CTSB-219ENST00000530640 RNF39Q9H2S5 420 aa16.88■□□□□ 0.29
CTSB-219ENST00000530640 KIAA1586Q9HCI6 787 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms