RNA–Protein interactions for RNA: ENST00000530563.1

TM9SF1-210, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 3

Gene TM9SF1, Length 721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-210ENST00000530563 LRRC3Q9BY71 257 aa11.75□□□□□ -0.53
TM9SF1-210ENST00000530563 ZSWIM6Q9HCJ5 1215 aa11.75□□□□□ -0.53
TM9SF1-210ENST00000530563 FBXL5Q9UKA1 691 aa11.75□□□□□ -0.53
TM9SF1-210ENST00000530563 PCDHA12Q9UN75 941 aa11.75□□□□□ -0.53
TM9SF1-210ENST00000530563 WASF3Q9UPY6 502 aa11.75□□□□□ -0.53
TM9SF1-210ENST00000530563 GDAQ9Y2T3 454 aa11.75□□□□□ -0.53
TM9SF1-210ENST00000530563 MYBPHLA2RUH7 354 aa11.74□□□□□ -0.53
TM9SF1-210ENST00000530563 HEPACAM2A8MVW5 462 aa11.74□□□□□ -0.53
TM9SF1-210ENST00000530563 ZNF263O14978 683 aa11.74□□□□□ -0.53
TM9SF1-210ENST00000530563 MEFVO15553 781 aaPredicted RBP11.74□□□□□ -0.53
TM9SF1-210ENST00000530563 TRAPPC3O43617 180 aa11.74□□□□□ -0.53
TM9SF1-210ENST00000530563 DTNBO60941 627 aa11.74□□□□□ -0.53
TM9SF1-210ENST00000530563 CDC45O75419 566 aa11.74□□□□□ -0.53
TM9SF1-210ENST00000530563 BAG4O95429 457 aaKnown RBP11.74□□□□□ -0.53
TM9SF1-210ENST00000530563 PRKCBP05771 671 aa11.74□□□□□ -0.53
TM9SF1-210ENST00000530563 FCHO2Q0JRZ9 810 aa11.74□□□□□ -0.53
TM9SF1-210ENST00000530563 CCINQ13939 588 aa11.74□□□□□ -0.53
TM9SF1-210ENST00000530563 CCDC6Q16204 474 aa11.74□□□□□ -0.53
TM9SF1-210ENST00000530563 STPG1Q5TH74 334 aa11.74□□□□□ -0.53
TM9SF1-210ENST00000530563 TPGS2Q68CL5 300 aa11.74□□□□□ -0.53
TM9SF1-210ENST00000530563 IL31Q6EBC2 164 aa11.74□□□□□ -0.53
TM9SF1-210ENST00000530563 PDZD4Q76G19 769 aaPredicted RBP11.74□□□□□ -0.53
TM9SF1-210ENST00000530563 RUFY3Q7L099 469 aa11.74□□□□□ -0.53
TM9SF1-210ENST00000530563 SHKBP1Q8TBC3 707 aa11.74□□□□□ -0.53
TM9SF1-210ENST00000530563 ZMAT2Q96NC0 199 aaKnown RBP11.74□□□□□ -0.53
TM9SF1-210ENST00000530563 MTMR9Q96QG7 549 aa11.74□□□□□ -0.53
TM9SF1-210ENST00000530563 NAP1L4Q99733 375 aaKnown RBP11.74□□□□□ -0.53
TM9SF1-210ENST00000530563 LSM14BQ9BX40 385 aaKnown RBP11.74□□□□□ -0.53
TM9SF1-210ENST00000530563 ARRDC1-AS1Q9H2J1 176 aa11.74□□□□□ -0.53
TM9SF1-210ENST00000530563 CYP4F11Q9HBI6 524 aa11.74□□□□□ -0.53
TM9SF1-210ENST00000530563 GREB1Q4ZG55 1949 aa11.74□□□□□ -0.53
TM9SF1-210ENST00000530563 SLC38A8A6NNN8 435 aa11.73□□□□□ -0.53
TM9SF1-210ENST00000530563 CPLX1O14810 134 aa11.73□□□□□ -0.53
TM9SF1-210ENST00000530563 AXIN1O15169 862 aa11.73□□□□□ -0.53
TM9SF1-210ENST00000530563 CHADO15335 359 aa11.73□□□□□ -0.53
TM9SF1-210ENST00000530563 MARCH6O60337 910 aa11.73□□□□□ -0.53
TM9SF1-210ENST00000530563 EPN2O95208 641 aa11.73□□□□□ -0.53
TM9SF1-210ENST00000530563 KCNK5O95279 499 aa11.73□□□□□ -0.53
TM9SF1-210ENST00000530563 VNN2O95498 520 aa11.73□□□□□ -0.53
TM9SF1-210ENST00000530563 PSMA5P28066 241 aa11.73□□□□□ -0.53
TM9SF1-210ENST00000530563 ELF1P32519 619 aa11.73□□□□□ -0.53
TM9SF1-210ENST00000530563 NR5A1Q13285 461 aa11.73□□□□□ -0.53
TM9SF1-210ENST00000530563 LRRC32Q14392 662 aa11.73□□□□□ -0.53
TM9SF1-210ENST00000530563 TEAD2Q15562 447 aa11.73□□□□□ -0.53
TM9SF1-210ENST00000530563 TRIP11Q15643 1979 aa11.73□□□□□ -0.53
TM9SF1-210ENST00000530563 MAPK6Q16659 721 aa11.73□□□□□ -0.53
TM9SF1-210ENST00000530563 CYP4A22Q5TCH4 519 aa11.73□□□□□ -0.53
TM9SF1-210ENST00000530563 ZBTB8OSQ8IWT0 167 aa11.73□□□□□ -0.53
TM9SF1-210ENST00000530563 CEP120Q8N960 986 aa11.73□□□□□ -0.53
TM9SF1-210ENST00000530563 MCPH1Q8NEM0 835 aa11.73□□□□□ -0.53
TM9SF1-210ENST00000530563 MSANTD3Q96H12 275 aa11.73□□□□□ -0.53
TM9SF1-210ENST00000530563 LOXL4Q96JB6 756 aa11.73□□□□□ -0.53
TM9SF1-210ENST00000530563 MKNK1Q9BUB5 465 aa11.73□□□□□ -0.53
TM9SF1-210ENST00000530563 TMEM121BQ9BXQ6 578 aaPredicted RBP11.73□□□□□ -0.53
TM9SF1-210ENST00000530563 C2orf40Q9H1Z8 148 aa11.73□□□□□ -0.53
TM9SF1-210ENST00000530563 C8orf33Q9H7E9 229 aaPredicted RBP11.73□□□□□ -0.53
TM9SF1-210ENST00000530563 TTC12Q9H892 705 aaPredicted RBP11.73□□□□□ -0.53
TM9SF1-210ENST00000530563 SH2B1Q9NRF2 756 aaPredicted RBP11.73□□□□□ -0.53
TM9SF1-210ENST00000530563 IGSF10Q6WRI0 2623 aa11.72□□□□□ -0.53
TM9SF1-210ENST00000530563 C1QTNF9BB2RNN3 333 aa11.72□□□□□ -0.53
TM9SF1-210ENST00000530563 SPECC1L-ADORA2AF8WAN1 911 aa11.72□□□□□ -0.53
TM9SF1-210ENST00000530563 SYN3O14994 580 aa11.72□□□□□ -0.53
TM9SF1-210ENST00000530563 EXTL3O43909 919 aa11.72□□□□□ -0.53
TM9SF1-210ENST00000530563 MED24O75448 989 aa11.72□□□□□ -0.53
TM9SF1-210ENST00000530563 C1QTNF9P0C862 333 aa11.72□□□□□ -0.53
TM9SF1-210ENST00000530563 ATP2B1P20020 1258 aa11.72□□□□□ -0.53
TM9SF1-210ENST00000530563 CTHP32929 405 aa11.72□□□□□ -0.53
TM9SF1-210ENST00000530563 ARPP19P56211 112 aa11.72□□□□□ -0.53
TM9SF1-210ENST00000530563 TWF1Q12792 350 aa11.72□□□□□ -0.53
TM9SF1-210ENST00000530563 STK3Q13188 491 aa11.72□□□□□ -0.53
TM9SF1-210ENST00000530563 DCAF4L1Q3SXM0 396 aa11.72□□□□□ -0.53
TM9SF1-210ENST00000530563 AASDHQ4L235 1098 aaPredicted RBP11.72□□□□□ -0.53
TM9SF1-210ENST00000530563 DGKKQ5KSL6 1271 aa11.72□□□□□ -0.53
TM9SF1-210ENST00000530563 PKN3Q6P5Z2 889 aa11.72□□□□□ -0.53
TM9SF1-210ENST00000530563 KBTBD6Q86V97 674 aa11.72□□□□□ -0.53
TM9SF1-210ENST00000530563 CATSPER3Q86XQ3 398 aa11.72□□□□□ -0.53
TM9SF1-210ENST00000530563 TMC8Q8IU68 726 aa11.72□□□□□ -0.53
TM9SF1-210ENST00000530563 KDF1Q8NAX2 398 aaPredicted RBP11.72□□□□□ -0.53
TM9SF1-210ENST00000530563 BEST2Q8NFU1 509 aa11.72□□□□□ -0.53
TM9SF1-210ENST00000530563 ZNF512Q96ME7 567 aaPredicted RBP11.72□□□□□ -0.53
TM9SF1-210ENST00000530563 ADPGKQ9BRR6 497 aa11.72□□□□□ -0.53
TM9SF1-210ENST00000530563 CRISPLD1Q9H336 500 aa11.72□□□□□ -0.53
TM9SF1-210ENST00000530563 PTPRHQ9HD43 1115 aa11.72□□□□□ -0.53
TM9SF1-210ENST00000530563 AFF4Q9UHB7 1163 aaKnown RBP11.72□□□□□ -0.53
TM9SF1-210ENST00000530563 MAFFQ9ULX9 164 aa11.72□□□□□ -0.53
TM9SF1-210ENST00000530563 STK36Q9NRP7 1315 aa11.71□□□□□ -0.53
TM9SF1-210ENST00000530563 PODXLO00592 558 aa11.71□□□□□ -0.53
TM9SF1-210ENST00000530563 CTDNEP1O95476 244 aa11.71□□□□□ -0.53
TM9SF1-210ENST00000530563 MYL4P12829 197 aa11.71□□□□□ -0.53
TM9SF1-210ENST00000530563 KCNE1P15382 129 aa11.71□□□□□ -0.53
TM9SF1-210ENST00000530563 CYP11B2P19099 503 aa11.71□□□□□ -0.53
TM9SF1-210ENST00000530563 TXKP42681 527 aa11.71□□□□□ -0.53
TM9SF1-210ENST00000530563 NAMPTP43490 491 aa11.71□□□□□ -0.53
TM9SF1-210ENST00000530563 PXNP49023 591 aaPredicted RBP11.71□□□□□ -0.53
TM9SF1-210ENST00000530563 SCRN1Q12765 414 aa11.71□□□□□ -0.53
TM9SF1-210ENST00000530563 CALCRLQ16602 461 aa11.71□□□□□ -0.53
TM9SF1-210ENST00000530563 STXBP5Q5T5C0 1151 aa11.71□□□□□ -0.53
TM9SF1-210ENST00000530563 ATF7IP2Q5U623 682 aa11.71□□□□□ -0.53
TM9SF1-210ENST00000530563 IQCEQ6IPM2 695 aa11.71□□□□□ -0.53
TM9SF1-210ENST00000530563 C1orf228Q6PIY5 440 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms