RNA–Protein interactions for RNA: ENST00000529928.1

COL16A1-216, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 3

Gene COL16A1, Length 581 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-216ENST00000529928 CDT1Q9H211 546 aa17.61■□□□□ 0.41
COL16A1-216ENST00000529928 TRPV4Q9HBA0 871 aa17.61■□□□□ 0.41
COL16A1-216ENST00000529928 FBXL5Q9UKA1 691 aa17.61■□□□□ 0.41
COL16A1-216ENST00000529928 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.61■□□□□ 0.41
COL16A1-216ENST00000529928 PHLPP2Q6ZVD8 1323 aa17.61■□□□□ 0.41
COL16A1-216ENST00000529928 TRIP11Q15643 1979 aa17.6■□□□□ 0.41
COL16A1-216ENST00000529928 TPRP12270 2363 aaKnown RBP17.6■□□□□ 0.41
COL16A1-216ENST00000529928 NRG2O14511 850 aaPredicted RBP17.6■□□□□ 0.41
COL16A1-216ENST00000529928 SLC30A4O14863 429 aa17.6■□□□□ 0.41
COL16A1-216ENST00000529928 OR52Z1P0C646 297 aa17.6■□□□□ 0.41
COL16A1-216ENST00000529928 KCNE1P15382 129 aa17.6■□□□□ 0.41
COL16A1-216ENST00000529928 CXCL12P48061 93 aa17.6■□□□□ 0.41
COL16A1-216ENST00000529928 FOSBP53539 338 aa17.6■□□□□ 0.41
COL16A1-216ENST00000529928 ANAPC15P60006 121 aa17.6■□□□□ 0.41
COL16A1-216ENST00000529928 OSTNP61366 133 aa17.6■□□□□ 0.41
COL16A1-216ENST00000529928 ME3Q16798 604 aa17.6■□□□□ 0.41
COL16A1-216ENST00000529928 C1orf228Q6PIY5 440 aa17.6■□□□□ 0.41
COL16A1-216ENST00000529928 MFSD6LQ8IWD5 586 aa17.6■□□□□ 0.41
COL16A1-216ENST00000529928 E2F7Q96AV8 911 aa17.6■□□□□ 0.41
COL16A1-216ENST00000529928 MSANTD3Q96H12 275 aa17.6■□□□□ 0.41
COL16A1-216ENST00000529928 ZSWIM3Q96MP5 696 aa17.6■□□□□ 0.41
COL16A1-216ENST00000529928 ZMAT2Q96NC0 199 aaKnown RBP17.6■□□□□ 0.41
COL16A1-216ENST00000529928 ACO2Q99798 780 aaKnown RBP17.6■□□□□ 0.41
COL16A1-216ENST00000529928 GPR88Q9GZN0 384 aa17.6■□□□□ 0.41
COL16A1-216ENST00000529928 BHMT2Q9H2M3 363 aa17.6■□□□□ 0.41
COL16A1-216ENST00000529928 POLD4Q9HCU8 107 aa17.6■□□□□ 0.41
COL16A1-216ENST00000529928 PTPRHQ9HD43 1115 aa17.6■□□□□ 0.41
COL16A1-216ENST00000529928 ASAH2Q9NR71 780 aa17.6■□□□□ 0.41
COL16A1-216ENST00000529928 AFF4Q9UHB7 1163 aaKnown RBP17.6■□□□□ 0.41
COL16A1-216ENST00000529928 TICRRQ7Z2Z1 1910 aa17.6■□□□□ 0.41
COL16A1-216ENST00000529928 F5P12259 2224 aa17.59■□□□□ 0.41
COL16A1-216ENST00000529928 CHRNB1P11230 501 aa17.59■□□□□ 0.41
COL16A1-216ENST00000529928 MYL4P12829 197 aa17.59■□□□□ 0.41
COL16A1-216ENST00000529928 VIPR2P41587 438 aa17.59■□□□□ 0.41
COL16A1-216ENST00000529928 EPHA5P54756 1037 aa17.59■□□□□ 0.41
COL16A1-216ENST00000529928 TWF1Q12792 350 aa17.59■□□□□ 0.41
COL16A1-216ENST00000529928 SIM2Q14190 667 aaPredicted RBP17.59■□□□□ 0.41
COL16A1-216ENST00000529928 SAFBQ15424 915 aaKnown RBP eCLIP17.59■□□□□ 0.41
COL16A1-216ENST00000529928 HS6ST3Q8IZP7 471 aa17.59■□□□□ 0.41
COL16A1-216ENST00000529928 SPEM1Q8N4L4 309 aa17.59■□□□□ 0.41
COL16A1-216ENST00000529928 APPL2Q8NEU8 664 aa17.59■□□□□ 0.41
COL16A1-216ENST00000529928 ZSCAN18Q8TBC5 510 aaPredicted RBP17.59■□□□□ 0.41
COL16A1-216ENST00000529928 SUSD3Q96L08 255 aa17.59■□□□□ 0.41
COL16A1-216ENST00000529928 ACAP3Q96P50 834 aa17.59■□□□□ 0.41
COL16A1-216ENST00000529928 MRPL4Q9BYD3 311 aaKnown RBP17.59■□□□□ 0.41
COL16A1-216ENST00000529928 CEP72Q9P209 647 aa17.59■□□□□ 0.41
COL16A1-216ENST00000529928 CNTN3Q9P232 1028 aa17.59■□□□□ 0.41
COL16A1-216ENST00000529928 SPTBN2O15020 2390 aa17.59■□□□□ 0.41
COL16A1-216ENST00000529928 KMT2BQ9UMN6 2715 aaPredicted RBP17.58■□□□□ 0.41
COL16A1-216ENST00000529928 ACACBO00763 2458 aa17.58■□□□□ 0.41
COL16A1-216ENST00000529928 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.58■□□□□ 0.4
COL16A1-216ENST00000529928 CCDC169A6NNP5 214 aa17.58■□□□□ 0.4
COL16A1-216ENST00000529928 FOXD2O60548 495 aaPredicted RBP17.58■□□□□ 0.4
COL16A1-216ENST00000529928 JAK2O60674 1132 aa17.58■□□□□ 0.4
COL16A1-216ENST00000529928 MOSPD3O75425 235 aa17.58■□□□□ 0.4
COL16A1-216ENST00000529928 LARGE1O95461 756 aa17.58■□□□□ 0.4
COL16A1-216ENST00000529928 MCF2P10911 925 aa17.58■□□□□ 0.4
COL16A1-216ENST00000529928 CPB1P15086 417 aa17.58■□□□□ 0.4
COL16A1-216ENST00000529928 CCNE1P24864 410 aa17.58■□□□□ 0.4
COL16A1-216ENST00000529928 MCM4P33991 863 aa17.58■□□□□ 0.4
COL16A1-216ENST00000529928 CNR2P34972 360 aa17.58■□□□□ 0.4
COL16A1-216ENST00000529928 CCT6AP40227 531 aaKnown RBP17.58■□□□□ 0.4
COL16A1-216ENST00000529928 NPTX2P47972 431 aa17.58■□□□□ 0.4
COL16A1-216ENST00000529928 SATB1Q01826 763 aa17.58■□□□□ 0.4
COL16A1-216ENST00000529928 LRRC32Q14392 662 aa17.58■□□□□ 0.4
COL16A1-216ENST00000529928 CSRP2Q16527 193 aa17.58■□□□□ 0.4
COL16A1-216ENST00000529928 PPM1JQ5JR12 505 aa17.58■□□□□ 0.4
COL16A1-216ENST00000529928 CSGALNACT1Q8TDX6 532 aa17.58■□□□□ 0.4
COL16A1-216ENST00000529928 TCHPQ9BT92 498 aa17.58■□□□□ 0.4
COL16A1-216ENST00000529928 SLITRK6Q9H5Y7 841 aa17.58■□□□□ 0.4
COL16A1-216ENST00000529928 TMEM134Q9H6X4 195 aa17.58■□□□□ 0.4
COL16A1-216ENST00000529928 SEMA4GQ9NTN9 838 aa17.58■□□□□ 0.4
COL16A1-216ENST00000529928 HEPACAM2A8MVW5 462 aa17.57■□□□□ 0.4
COL16A1-216ENST00000529928 ARNTLO00327 626 aa17.57■□□□□ 0.4
COL16A1-216ENST00000529928 PEX3P56589 373 aa17.57■□□□□ 0.4
COL16A1-216ENST00000529928 PTGDRQ13258 359 aa17.57■□□□□ 0.4
COL16A1-216ENST00000529928 DMP1Q13316 513 aaPredicted RBP17.57■□□□□ 0.4
COL16A1-216ENST00000529928 TEAD2Q15562 447 aa17.57■□□□□ 0.4
COL16A1-216ENST00000529928 ZNF174Q15697 407 aa17.57■□□□□ 0.4
COL16A1-216ENST00000529928 ST3GAL2Q16842 350 aa17.57■□□□□ 0.4
COL16A1-216ENST00000529928 PRR23CQ6ZRP0 262 aa17.57■□□□□ 0.4
COL16A1-216ENST00000529928 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.57■□□□□ 0.4
COL16A1-216ENST00000529928 YAF2Q8IY57 180 aa17.57■□□□□ 0.4
COL16A1-216ENST00000529928 DDX12PQ92771 950 aa17.57■□□□□ 0.4
COL16A1-216ENST00000529928 C18orf25Q96B23 403 aaPredicted RBP17.57■□□□□ 0.4
COL16A1-216ENST00000529928 ARHGAP28Q9P2N2 729 aa17.57■□□□□ 0.4
COL16A1-216ENST00000529928 RBM19Q9Y4C8 960 aaKnown RBP17.57■□□□□ 0.4
COL16A1-216ENST00000529928 CHADO15335 359 aa17.56■□□□□ 0.4
COL16A1-216ENST00000529928 PAPSS2O95340 614 aaPredicted RBP17.56■□□□□ 0.4
COL16A1-216ENST00000529928 GJA1P17302 382 aa17.56■□□□□ 0.4
COL16A1-216ENST00000529928 PROZP22891 400 aa17.56■□□□□ 0.4
COL16A1-216ENST00000529928 MARCKSP29966 332 aaPredicted RBP17.56■□□□□ 0.4
COL16A1-216ENST00000529928 FXR2P51116 673 aaKnown RBP eCLIP17.56■□□□□ 0.4
COL16A1-216ENST00000529928 GAS6Q14393 721 aa17.56■□□□□ 0.4
COL16A1-216ENST00000529928 ECM1Q16610 540 aa17.56■□□□□ 0.4
COL16A1-216ENST00000529928 MPZL3Q6UWV2 235 aa17.56■□□□□ 0.4
COL16A1-216ENST00000529928 RNF19BQ6ZMZ0 732 aa17.56■□□□□ 0.4
COL16A1-216ENST00000529928 LONP2Q86WA8 852 aa17.56■□□□□ 0.4
COL16A1-216ENST00000529928 TBC1D32Q96NH3 1257 aa17.56■□□□□ 0.4
COL16A1-216ENST00000529928 TARS2Q9BW92 718 aaKnown RBP17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms