RNA–Protein interactions for RNA: ENST00000529745.5

CCDC90B-215, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-215ENST00000529745 ADALQ6DHV7 355 aa16.8■□□□□ 0.28
CCDC90B-215ENST00000529745 SLC8B1Q6J4K2 584 aa16.8■□□□□ 0.28
CCDC90B-215ENST00000529745 CRELD2Q6UXH1 353 aaPredicted RBP16.8■□□□□ 0.28
CCDC90B-215ENST00000529745 TMC5Q6UXY8 1006 aa16.8■□□□□ 0.28
CCDC90B-215ENST00000529745 CEP57Q86XR8 500 aa16.8■□□□□ 0.28
CCDC90B-215ENST00000529745 KREMEN2Q8NCW0 462 aa16.8■□□□□ 0.28
CCDC90B-215ENST00000529745 LEO1Q8WVC0 666 aaPredicted RBP16.8■□□□□ 0.28
CCDC90B-215ENST00000529745 KIF12Q96FN5 646 aa16.8■□□□□ 0.28
CCDC90B-215ENST00000529745 MFSD14AQ96MC6 490 aa16.8■□□□□ 0.28
CCDC90B-215ENST00000529745 TUBGCP4Q9UGJ1 667 aa16.8■□□□□ 0.28
CCDC90B-215ENST00000529745 CDH22Q9UJ99 828 aa16.8■□□□□ 0.28
CCDC90B-215ENST00000529745 C2CD2Q9Y426 696 aa16.8■□□□□ 0.28
CCDC90B-215ENST00000529745 SCN1AP35498 2009 aa16.8■□□□□ 0.28
CCDC90B-215ENST00000529745 M0QZQ0 153 aa16.79■□□□□ 0.28
CCDC90B-215ENST00000529745 ZMYND10O75800 440 aa16.79■□□□□ 0.28
CCDC90B-215ENST00000529745 LDHAP00338 332 aaKnown RBP16.79■□□□□ 0.28
CCDC90B-215ENST00000529745 RPL17P18621 184 aaKnown RBP16.79■□□□□ 0.28
CCDC90B-215ENST00000529745 CMA1P23946 247 aa16.79■□□□□ 0.28
CCDC90B-215ENST00000529745 KANK3Q6NY19 840 aa16.79■□□□□ 0.28
CCDC90B-215ENST00000529745 STXBP4Q6ZWJ1 553 aa16.79■□□□□ 0.28
CCDC90B-215ENST00000529745 UNC13DQ70J99 1090 aa16.79■□□□□ 0.28
CCDC90B-215ENST00000529745 EPM2AIP1Q7L775 607 aaPredicted RBP16.79■□□□□ 0.28
CCDC90B-215ENST00000529745 PALB2Q86YC2 1186 aa16.79■□□□□ 0.28
CCDC90B-215ENST00000529745 NT5DC4Q86YG4 428 aa16.79■□□□□ 0.28
CCDC90B-215ENST00000529745 ZDHHC14Q8IZN3 488 aa16.79■□□□□ 0.28
CCDC90B-215ENST00000529745 PRSS33Q8NF86 280 aa16.79■□□□□ 0.28
CCDC90B-215ENST00000529745 POMGNT1Q8WZA1 660 aa16.79■□□□□ 0.28
CCDC90B-215ENST00000529745 STAMQ92783 540 aa16.79■□□□□ 0.28
CCDC90B-215ENST00000529745 ZNF707Q96C28 371 aaPredicted RBP16.79■□□□□ 0.28
CCDC90B-215ENST00000529745 RPGRIP1Q96KN7 1286 aa16.79■□□□□ 0.28
CCDC90B-215ENST00000529745 FGFBP2Q9BYJ0 223 aa16.79■□□□□ 0.28
CCDC90B-215ENST00000529745 USP25Q9UHP3 1055 aa16.79■□□□□ 0.28
CCDC90B-215ENST00000529745 HPSEQ9Y251 543 aa16.79■□□□□ 0.28
CCDC90B-215ENST00000529745 MYO10Q9HD67 2058 aa16.79■□□□□ 0.28
CCDC90B-215ENST00000529745 UBE4BO95155 1302 aa16.78■□□□□ 0.28
CCDC90B-215ENST00000529745 CCDC195A0A1B0GUA6 201 aa16.78■□□□□ 0.28
CCDC90B-215ENST00000529745 PVALEFA0A1B0GWK0 134 aa16.78■□□□□ 0.28
CCDC90B-215ENST00000529745 KIAA0391O15091 583 aaKnown RBP16.78■□□□□ 0.28
CCDC90B-215ENST00000529745 HNRNPA1P09651 372 aaKnown RBP eCLIP16.78■□□□□ 0.28
CCDC90B-215ENST00000529745 ACOT2P49753 483 aa16.78■□□□□ 0.28
CCDC90B-215ENST00000529745 UVSSAQ2YD98 709 aa16.78■□□□□ 0.28
CCDC90B-215ENST00000529745 VARS2Q5ST30 1063 aaKnown RBP16.78■□□□□ 0.28
CCDC90B-215ENST00000529745 JADE1Q6IE81 842 aa16.78■□□□□ 0.28
CCDC90B-215ENST00000529745 PLCD3Q8N3E9 789 aa16.78■□□□□ 0.28
CCDC90B-215ENST00000529745 BEST2Q8NFU1 509 aa16.78■□□□□ 0.28
CCDC90B-215ENST00000529745 ZNF507Q8TCN5 953 aa16.78■□□□□ 0.28
CCDC90B-215ENST00000529745 SPATA32Q96LK8 384 aa16.78■□□□□ 0.28
CCDC90B-215ENST00000529745 PRKD2Q9BZL6 878 aa16.78■□□□□ 0.28
CCDC90B-215ENST00000529745 SCAND2PQ9GZW5 306 aaPredicted RBP16.78■□□□□ 0.28
CCDC90B-215ENST00000529745 IKZF4Q9H2S9 585 aa16.78■□□□□ 0.28
CCDC90B-215ENST00000529745 TBC1D7Q9P0N9 293 aa16.78■□□□□ 0.28
CCDC90B-215ENST00000529745 KCNH3Q9ULD8 1083 aa16.78■□□□□ 0.28
CCDC90B-215ENST00000529745 PCDHB8Q9UN66 801 aa16.78■□□□□ 0.28
CCDC90B-215ENST00000529745 NUB1Q9Y5A7 615 aa16.78■□□□□ 0.28
CCDC90B-215ENST00000529745 TECTAO75443 2155 aa16.78■□□□□ 0.28
CCDC90B-215ENST00000529745 PTPRZ1P23471 2315 aaPredicted RBP16.78■□□□□ 0.28
CCDC90B-215ENST00000529745 NOTCH4Q99466 2003 aa16.77■□□□□ 0.28
CCDC90B-215ENST00000529745 ANO9A1A5B4 782 aa16.77■□□□□ 0.28
CCDC90B-215ENST00000529745 H7C4K7 107 aa16.77■□□□□ 0.28
CCDC90B-215ENST00000529745 I3L4J1 428 aa16.77■□□□□ 0.28
CCDC90B-215ENST00000529745 ADAM12O43184 909 aa16.77■□□□□ 0.28
CCDC90B-215ENST00000529745 ACTN4O43707 911 aaKnown RBP16.77■□□□□ 0.28
CCDC90B-215ENST00000529745 RFPL2O75678 378 aa16.77■□□□□ 0.28
CCDC90B-215ENST00000529745 IL18RAPO95256 599 aa16.77■□□□□ 0.28
CCDC90B-215ENST00000529745 SLFN14P0C7P3 912 aa16.77■□□□□ 0.28
CCDC90B-215ENST00000529745 OR1D2P34982 312 aa16.77■□□□□ 0.28
CCDC90B-215ENST00000529745 ASIC1P78348 528 aa16.77■□□□□ 0.28
CCDC90B-215ENST00000529745 SPAG1Q07617 926 aa16.77■□□□□ 0.28
CCDC90B-215ENST00000529745 FAM26FQ5R3K3 315 aa16.77■□□□□ 0.28
CCDC90B-215ENST00000529745 RSPO2Q6UXX9 243 aaPredicted RBP16.77■□□□□ 0.28
CCDC90B-215ENST00000529745 CCDC149Q6ZUS6 474 aa16.77■□□□□ 0.28
CCDC90B-215ENST00000529745 GLYCTKQ8IVS8 523 aa16.77■□□□□ 0.28
CCDC90B-215ENST00000529745 BRSK2Q8IWQ3 736 aa16.77■□□□□ 0.28
CCDC90B-215ENST00000529745 FEZF2Q8TBJ5 459 aa16.77■□□□□ 0.28
CCDC90B-215ENST00000529745 OXCT2Q9BYC2 517 aaPredicted RBP16.77■□□□□ 0.28
CCDC90B-215ENST00000529745 WDR6Q9NNW5 1121 aaKnown RBP16.77■□□□□ 0.28
CCDC90B-215ENST00000529745 MUTYHQ9UIF7 546 aa16.77■□□□□ 0.28
CCDC90B-215ENST00000529745 DOCK6Q96HP0 2047 aa16.77■□□□□ 0.27
CCDC90B-215ENST00000529745 SPDYE4A6NLX3 237 aa16.76■□□□□ 0.27
CCDC90B-215ENST00000529745 C2CD4DB7Z1M9 353 aa16.76■□□□□ 0.27
CCDC90B-215ENST00000529745 PIRO00625 290 aa16.76■□□□□ 0.27
CCDC90B-215ENST00000529745 PRPF6O94906 941 aaKnown RBP16.76■□□□□ 0.27
CCDC90B-215ENST00000529745 ABLIM3O94929 683 aa16.76■□□□□ 0.27
CCDC90B-215ENST00000529745 MYL1P05976 194 aa16.76■□□□□ 0.27
CCDC90B-215ENST00000529745 WEE2P0C1S8 567 aa16.76■□□□□ 0.27
CCDC90B-215ENST00000529745 MCM4P33991 863 aa16.76■□□□□ 0.27
CCDC90B-215ENST00000529745 PTPN5P54829 565 aa16.76■□□□□ 0.27
CCDC90B-215ENST00000529745 SNRPFP62306 86 aaKnown RBP16.76■□□□□ 0.27
CCDC90B-215ENST00000529745 TMEM132DQ14C87 1099 aa16.76■□□□□ 0.27
CCDC90B-215ENST00000529745 APPL2Q8NEU8 664 aa16.76■□□□□ 0.27
CCDC90B-215ENST00000529745 EDAQ92838 391 aa16.76■□□□□ 0.27
CCDC90B-215ENST00000529745 MAFFQ9ULX9 164 aa16.76■□□□□ 0.27
CCDC90B-215ENST00000529745 CDY1Q9Y6F8 540 aa16.76■□□□□ 0.27
CCDC90B-215ENST00000529745 CLUHO75153 1309 aa16.75■□□□□ 0.27
CCDC90B-215ENST00000529745 MYO15AQ9UKN7 3530 aa16.75■□□□□ 0.27
CCDC90B-215ENST00000529745 A0A1W2PQ27 194 aa16.75■□□□□ 0.27
CCDC90B-215ENST00000529745 A0A1W2PQ64 194 aa16.75■□□□□ 0.27
CCDC90B-215ENST00000529745 A0A1W2PQD8 194 aa16.75■□□□□ 0.27
CCDC90B-215ENST00000529745 GFRA3O60609 400 aa16.75■□□□□ 0.27
CCDC90B-215ENST00000529745 OAZ2O95190 189 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms