RNA–Protein interactions for RNA: ENST00000529073.5

CCDC90B-211, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5 BASIC

Gene CCDC90B, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-211ENST00000529073 DENND4AQ7Z401 1863 aa12.38□□□□□ -0.43
CCDC90B-211ENST00000529073 PVALEFA0A1B0GWK0 134 aa12.38□□□□□ -0.43
CCDC90B-211ENST00000529073 TMEM189-UBE2V1I3L0A0 370 aa12.38□□□□□ -0.43
CCDC90B-211ENST00000529073 EIF3DO15371 548 aaKnown RBP eCLIP12.38□□□□□ -0.43
CCDC90B-211ENST00000529073 EXTL3O43909 919 aa12.38□□□□□ -0.43
CCDC90B-211ENST00000529073 VNN2O95498 520 aa12.38□□□□□ -0.43
CCDC90B-211ENST00000529073 FGFR3P22607 806 aa12.38□□□□□ -0.43
CCDC90B-211ENST00000529073 KLRC2P26717 231 aa12.38□□□□□ -0.43
CCDC90B-211ENST00000529073 PMS1P54277 932 aaKnown RBP12.38□□□□□ -0.43
CCDC90B-211ENST00000529073 AMPD3Q01432 767 aa12.38□□□□□ -0.43
CCDC90B-211ENST00000529073 FAM160A1Q05DH4 1040 aa12.38□□□□□ -0.43
CCDC90B-211ENST00000529073 TMEM132DQ14C87 1099 aa12.38□□□□□ -0.43
CCDC90B-211ENST00000529073 PSMD5Q16401 504 aa12.38□□□□□ -0.43
CCDC90B-211ENST00000529073 BMT2Q1RMZ1 405 aa12.38□□□□□ -0.43
CCDC90B-211ENST00000529073 SPATA1Q5VX52 437 aa12.38□□□□□ -0.43
CCDC90B-211ENST00000529073 C9orf57Q5W0N0 161 aa12.38□□□□□ -0.43
CCDC90B-211ENST00000529073 TMC5Q6UXY8 1006 aa12.38□□□□□ -0.43
CCDC90B-211ENST00000529073 C1orf127Q8N9H9 656 aa12.38□□□□□ -0.43
CCDC90B-211ENST00000529073 SMRP1Q8NCR6 262 aa12.38□□□□□ -0.43
CCDC90B-211ENST00000529073 MTMR12Q9C0I1 747 aa12.38□□□□□ -0.43
CCDC90B-211ENST00000529073 RXFP1Q9HBX9 757 aa12.38□□□□□ -0.43
CCDC90B-211ENST00000529073 MRPL17Q9NRX2 175 aaKnown RBP12.38□□□□□ -0.43
CCDC90B-211ENST00000529073 SIX4Q9UIU6 781 aa12.38□□□□□ -0.43
CCDC90B-211ENST00000529073 CD207Q9UJ71 328 aa12.38□□□□□ -0.43
CCDC90B-211ENST00000529073 BIN1O00499 593 aa12.37□□□□□ -0.43
CCDC90B-211ENST00000529073 TGM5O43548 720 aa12.37□□□□□ -0.43
CCDC90B-211ENST00000529073 BMP6P22004 513 aa12.37□□□□□ -0.43
CCDC90B-211ENST00000529073 GARTP22102 1010 aa12.37□□□□□ -0.43
CCDC90B-211ENST00000529073 LRPAP1P30533 357 aa12.37□□□□□ -0.43
CCDC90B-211ENST00000529073 POLR2BP30876 1174 aaKnown RBP12.37□□□□□ -0.43
CCDC90B-211ENST00000529073 MCM4P33991 863 aa12.37□□□□□ -0.43
CCDC90B-211ENST00000529073 ARPP19P56211 112 aa12.37□□□□□ -0.43
CCDC90B-211ENST00000529073 DLG4P78352 724 aa12.37□□□□□ -0.43
CCDC90B-211ENST00000529073 USP41Q3LFD5 358 aa12.37□□□□□ -0.43
CCDC90B-211ENST00000529073 VARS2Q5ST30 1063 aaKnown RBP12.37□□□□□ -0.43
CCDC90B-211ENST00000529073 DCLRE1AQ6PJP8 1040 aa12.37□□□□□ -0.43
CCDC90B-211ENST00000529073 APBB1IPQ7Z5R6 666 aaPredicted RBP12.37□□□□□ -0.43
CCDC90B-211ENST00000529073 GPD1LQ8N335 351 aa12.37□□□□□ -0.43
CCDC90B-211ENST00000529073 TTC9BQ8N6N2 239 aa12.37□□□□□ -0.43
CCDC90B-211ENST00000529073 TMEM87AQ8NBN3 555 aa12.37□□□□□ -0.43
CCDC90B-211ENST00000529073 PIK3R5Q8WYR1 880 aa12.37□□□□□ -0.43
CCDC90B-211ENST00000529073 ZNF516Q92618 1163 aa12.37□□□□□ -0.43
CCDC90B-211ENST00000529073 RTP3Q9BQQ7 232 aa12.37□□□□□ -0.43
CCDC90B-211ENST00000529073 TTPALQ9BTX7 342 aa12.37□□□□□ -0.43
CCDC90B-211ENST00000529073 CRISPLD1Q9H336 500 aa12.37□□□□□ -0.43
CCDC90B-211ENST00000529073 SCUBE2Q9NQ36 999 aa12.37□□□□□ -0.43
CCDC90B-211ENST00000529073 MAN1C1Q9NR34 630 aa12.37□□□□□ -0.43
CCDC90B-211ENST00000529073 EXOC7Q9UPT5 735 aa12.37□□□□□ -0.43
CCDC90B-211ENST00000529073 PCDHA5Q9Y5H7 936 aa12.37□□□□□ -0.43
CCDC90B-211ENST00000529073 IRAK3Q9Y616 596 aa12.37□□□□□ -0.43
CCDC90B-211ENST00000529073 ANO9A1A5B4 782 aa12.36□□□□□ -0.43
CCDC90B-211ENST00000529073 TRIM49BA6NDI0 452 aa12.36□□□□□ -0.43
CCDC90B-211ENST00000529073 LRRN2O75325 713 aa12.36□□□□□ -0.43
CCDC90B-211ENST00000529073 PRPF40AO75400 957 aaKnown RBP12.36□□□□□ -0.43
CCDC90B-211ENST00000529073 RHOBTB3O94955 611 aa12.36□□□□□ -0.43
CCDC90B-211ENST00000529073 ITGB3P05106 788 aa12.36□□□□□ -0.43
CCDC90B-211ENST00000529073 OR1D2P34982 312 aa12.36□□□□□ -0.43
CCDC90B-211ENST00000529073 NTHL1P78549 312 aa12.36□□□□□ -0.43
CCDC90B-211ENST00000529073 TFAMQ00059 246 aaKnown RBP12.36□□□□□ -0.43
CCDC90B-211ENST00000529073 SMAD4Q13485 552 aaKnown RBP12.36□□□□□ -0.43
CCDC90B-211ENST00000529073 ALCAMQ13740 583 aa12.36□□□□□ -0.43
CCDC90B-211ENST00000529073 KNOP1Q1ED39 458 aaKnown RBP12.36□□□□□ -0.43
CCDC90B-211ENST00000529073 C1orf220Q5T0J3 134 aa12.36□□□□□ -0.43
CCDC90B-211ENST00000529073 SLFN12LQ6IEE8 588 aa12.36□□□□□ -0.43
CCDC90B-211ENST00000529073 KIAA1841Q6NSI8 718 aa12.36□□□□□ -0.43
CCDC90B-211ENST00000529073 OSTM1Q86WC4 334 aa12.36□□□□□ -0.43
CCDC90B-211ENST00000529073 STKLD1Q8NE28 680 aa12.36□□□□□ -0.43
CCDC90B-211ENST00000529073 CCDC127Q96BQ5 260 aa12.36□□□□□ -0.43
CCDC90B-211ENST00000529073 ZNF707Q96C28 371 aaPredicted RBP12.36□□□□□ -0.43
CCDC90B-211ENST00000529073 SUSD3Q96L08 255 aa12.36□□□□□ -0.43
CCDC90B-211ENST00000529073 FBXL18Q96ME1 805 aa12.36□□□□□ -0.43
CCDC90B-211ENST00000529073 UHRF1Q96T88 793 aaPredicted RBP12.36□□□□□ -0.43
CCDC90B-211ENST00000529073 LRRC27Q9C0I9 530 aa12.36□□□□□ -0.43
CCDC90B-211ENST00000529073 POMKQ9H5K3 350 aa12.36□□□□□ -0.43
CCDC90B-211ENST00000529073 TMEM206Q9H813 350 aa12.36□□□□□ -0.43
CCDC90B-211ENST00000529073 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.36□□□□□ -0.43
CCDC90B-211ENST00000529073 DPP3Q9NY33 737 aa12.36□□□□□ -0.43
CCDC90B-211ENST00000529073 MTRRQ9UBK8 725 aa12.36□□□□□ -0.43
CCDC90B-211ENST00000529073 MAN1B1Q9UKM7 699 aa12.36□□□□□ -0.43
CCDC90B-211ENST00000529073 UBQLN1Q9UMX0 589 aaKnown RBP12.36□□□□□ -0.43
CCDC90B-211ENST00000529073 CDY1Q9Y6F8 540 aa12.36□□□□□ -0.43
CCDC90B-211ENST00000529073 UBE4BO95155 1302 aa12.36□□□□□ -0.43
CCDC90B-211ENST00000529073 WDR27A2RRH5 827 aa12.35□□□□□ -0.43
CCDC90B-211ENST00000529073 DLL1O00548 723 aa12.35□□□□□ -0.43
CCDC90B-211ENST00000529073 SEC24AO95486 1093 aa12.35□□□□□ -0.43
CCDC90B-211ENST00000529073 PRCPP42785 496 aa12.35□□□□□ -0.43
CCDC90B-211ENST00000529073 AARSP49588 968 aaKnown RBP eCLIP12.35□□□□□ -0.43
CCDC90B-211ENST00000529073 CYP24A1Q07973 514 aa12.35□□□□□ -0.43
CCDC90B-211ENST00000529073 CAMK4Q16566 473 aa12.35□□□□□ -0.43
CCDC90B-211ENST00000529073 ZCWPW2Q504Y3 356 aa12.35□□□□□ -0.43
CCDC90B-211ENST00000529073 PDE12Q6L8Q7 609 aaKnown RBP12.35□□□□□ -0.43
CCDC90B-211ENST00000529073 LILRA6Q6PI73 481 aa12.35□□□□□ -0.43
CCDC90B-211ENST00000529073 TMEM184AQ6ZMB5 413 aa12.35□□□□□ -0.43
CCDC90B-211ENST00000529073 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.35□□□□□ -0.43
CCDC90B-211ENST00000529073 SUSD6Q92537 303 aa12.35□□□□□ -0.43
CCDC90B-211ENST00000529073 BORCS6Q96GS4 357 aa12.35□□□□□ -0.43
CCDC90B-211ENST00000529073 SENP8Q96LD8 212 aa12.35□□□□□ -0.43
CCDC90B-211ENST00000529073 UROC1Q96N76 676 aa12.35□□□□□ -0.43
CCDC90B-211ENST00000529073 LPIN3Q9BQK8 851 aa12.35□□□□□ -0.43
CCDC90B-211ENST00000529073 SMOC2Q9H3U7 446 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms