RNA–Protein interactions for RNA: ENST00000528989.5

LDLRAD3-203, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LDLRAD3, Length 1,879 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-203ENST00000528989 CASTOR2A6NHX0 329 aa26.6■■□□□ 1.85
LDLRAD3-203ENST00000528989 INPPL1O15357 1258 aa26.6■■□□□ 1.85
LDLRAD3-203ENST00000528989 ASS1P00966 412 aaKnown RBP26.6■■□□□ 1.85
LDLRAD3-203ENST00000528989 IQCEQ6IPM2 695 aa26.6■■□□□ 1.85
LDLRAD3-203ENST00000528989 PPFIBP1Q86W92 1011 aa26.6■■□□□ 1.85
LDLRAD3-203ENST00000528989 TSPAN18Q96SJ8 248 aa26.6■■□□□ 1.85
LDLRAD3-203ENST00000528989 TBC1D13Q9NVG8 400 aa26.6■■□□□ 1.85
LDLRAD3-203ENST00000528989 HCSTQ9UBK5 93 aa26.6■■□□□ 1.85
LDLRAD3-203ENST00000528989 ANO9A1A5B4 782 aa26.59■■□□□ 1.85
LDLRAD3-203ENST00000528989 DDHD2O94830 711 aa26.59■■□□□ 1.85
LDLRAD3-203ENST00000528989 CYP3A5P20815 502 aa26.59■■□□□ 1.85
LDLRAD3-203ENST00000528989 NOP14P78316 857 aaKnown RBP26.59■■□□□ 1.85
LDLRAD3-203ENST00000528989 RBP5P82980 135 aa26.59■■□□□ 1.85
LDLRAD3-203ENST00000528989 SGSM1Q2NKQ1 1148 aa26.59■■□□□ 1.85
LDLRAD3-203ENST00000528989 WDR44Q5JSH3 913 aa26.59■■□□□ 1.85
LDLRAD3-203ENST00000528989 ABI1Q8IZP0 508 aa26.59■■□□□ 1.85
LDLRAD3-203ENST00000528989 PPM1KQ8N3J5 372 aa26.59■■□□□ 1.85
LDLRAD3-203ENST00000528989 ARID3AQ99856 593 aa26.59■■□□□ 1.85
LDLRAD3-203ENST00000528989 NUP58Q9BVL2 599 aa26.59■■□□□ 1.85
LDLRAD3-203ENST00000528989 SLC38A7Q9NVC3 462 aa26.59■■□□□ 1.85
LDLRAD3-203ENST00000528989 CAPN11Q9UMQ6 739 aa26.59■■□□□ 1.85
LDLRAD3-203ENST00000528989 ZBBXA8MT70 800 aa26.59■■□□□ 1.85
LDLRAD3-203ENST00000528989 CLCNKBP51801 687 aa26.59■■□□□ 1.85
LDLRAD3-203ENST00000528989 GRIK3Q13003 919 aa26.59■■□□□ 1.85
LDLRAD3-203ENST00000528989 HPDLQ96IR7 371 aa26.59■■□□□ 1.85
LDLRAD3-203ENST00000528989 NT5C1BQ96P26 610 aa26.59■■□□□ 1.85
LDLRAD3-203ENST00000528989 NAA15Q9BXJ9 866 aaKnown RBP26.59■■□□□ 1.85
LDLRAD3-203ENST00000528989 DNAJC12Q9UKB3 198 aa26.59■■□□□ 1.85
LDLRAD3-203ENST00000528989 PIRO00625 290 aa26.58■■□□□ 1.85
LDLRAD3-203ENST00000528989 XPOTO43592 962 aaKnown RBP26.58■■□□□ 1.85
LDLRAD3-203ENST00000528989 RAPGEF1Q13905 1077 aa26.58■■□□□ 1.85
LDLRAD3-203ENST00000528989 ZNF699Q32M78 642 aa26.58■■□□□ 1.85
LDLRAD3-203ENST00000528989 WDR72Q3MJ13 1102 aa26.58■■□□□ 1.85
LDLRAD3-203ENST00000528989 FIGNQ5HY92 759 aa26.58■■□□□ 1.85
LDLRAD3-203ENST00000528989 BAP1Q92560 729 aa26.58■■□□□ 1.85
LDLRAD3-203ENST00000528989 LBHD1Q9BQE6 289 aaPredicted RBP26.58■■□□□ 1.85
LDLRAD3-203ENST00000528989 IMPACTQ9P2X3 320 aa26.58■■□□□ 1.85
LDLRAD3-203ENST00000528989 NXF1Q9UBU9 619 aaKnown RBP26.58■■□□□ 1.85
LDLRAD3-203ENST00000528989 TBKBP1A7MCY6 615 aa26.57■■□□□ 1.84
LDLRAD3-203ENST00000528989 BAIAP3O94812 1187 aa26.57■■□□□ 1.84
LDLRAD3-203ENST00000528989 AMHP03971 560 aa26.57■■□□□ 1.84
LDLRAD3-203ENST00000528989 PNMA6AP0CW24 399 aaPredicted RBP26.57■■□□□ 1.84
LDLRAD3-203ENST00000528989 ARHGAP44Q17R89 818 aa26.57■■□□□ 1.84
LDLRAD3-203ENST00000528989 PAN2Q504Q3 1202 aaKnown RBP26.57■■□□□ 1.84
LDLRAD3-203ENST00000528989 CACNA2D4Q7Z3S7 1137 aa26.57■■□□□ 1.84
LDLRAD3-203ENST00000528989 TC2NQ8N9U0 490 aa26.57■■□□□ 1.84
LDLRAD3-203ENST00000528989 KREMEN1Q96MU8 473 aa26.57■■□□□ 1.84
LDLRAD3-203ENST00000528989 CEP72Q9P209 647 aa26.57■■□□□ 1.84
LDLRAD3-203ENST00000528989 POLIQ9UNA4 740 aa26.57■■□□□ 1.84
LDLRAD3-203ENST00000528989 LTBP2Q14767 1821 aa26.57■■□□□ 1.84
LDLRAD3-203ENST00000528989 LAMA3Q16787 3333 aa26.57■■□□□ 1.84
LDLRAD3-203ENST00000528989 SPTLC1O15269 473 aa26.57■■□□□ 1.84
LDLRAD3-203ENST00000528989 DGKIO75912 1065 aa26.57■■□□□ 1.84
LDLRAD3-203ENST00000528989 LRPAP1P30533 357 aa26.57■■□□□ 1.84
LDLRAD3-203ENST00000528989 URGCPQ8TCY9 931 aa26.57■■□□□ 1.84
LDLRAD3-203ENST00000528989 IMPG2Q9BZV3 1241 aa26.57■■□□□ 1.84
LDLRAD3-203ENST00000528989 DNAJB4Q9UDY4 337 aa26.57■■□□□ 1.84
LDLRAD3-203ENST00000528989 LUC7L2Q9Y383 392 aaKnown RBP26.57■■□□□ 1.84
LDLRAD3-203ENST00000528989 R3HCC1Q9Y3T6 440 aaKnown RBP26.57■■□□□ 1.84
LDLRAD3-203ENST00000528989 F8W810 466 aa26.56■■□□□ 1.84
LDLRAD3-203ENST00000528989 ZC3H11AO75152 810 aaKnown RBP eCLIP26.56■■□□□ 1.84
LDLRAD3-203ENST00000528989 KRT9P35527 623 aa26.56■■□□□ 1.84
LDLRAD3-203ENST00000528989 RNASELQ05823 741 aaKnown RBP26.56■■□□□ 1.84
LDLRAD3-203ENST00000528989 C3orf58Q8NDZ4 430 aa26.56■■□□□ 1.84
LDLRAD3-203ENST00000528989 PDCD11Q14690 1871 aaKnown RBP26.56■■□□□ 1.84
LDLRAD3-203ENST00000528989 AKR1B15C9JRZ8 316 aaPredicted RBP26.55■■□□□ 1.84
LDLRAD3-203ENST00000528989 EFCAB14O75071 495 aa26.55■■□□□ 1.84
LDLRAD3-203ENST00000528989 TUSC3Q13454 348 aa26.55■■□□□ 1.84
LDLRAD3-203ENST00000528989 UPP1Q16831 310 aa26.55■■□□□ 1.84
LDLRAD3-203ENST00000528989 GPR88Q9GZN0 384 aa26.55■■□□□ 1.84
LDLRAD3-203ENST00000528989 KANSL3Q9P2N6 904 aa26.55■■□□□ 1.84
LDLRAD3-203ENST00000528989 A0A1W2PQJ5 194 aa26.55■■□□□ 1.84
LDLRAD3-203ENST00000528989 LRRC53A6NM62 1247 aa26.55■■□□□ 1.84
LDLRAD3-203ENST00000528989 PODXLO00592 558 aa26.55■■□□□ 1.84
LDLRAD3-203ENST00000528989 MFAP3LO75121 409 aa26.55■■□□□ 1.84
LDLRAD3-203ENST00000528989 DEKP35659 375 aaKnown RBP26.55■■□□□ 1.84
LDLRAD3-203ENST00000528989 KCNJ6P48051 423 aa26.55■■□□□ 1.84
LDLRAD3-203ENST00000528989 DSC1Q08554 894 aa26.55■■□□□ 1.84
LDLRAD3-203ENST00000528989 TRIM14Q14142 442 aa26.55■■□□□ 1.84
LDLRAD3-203ENST00000528989 DRAP1Q14919 205 aaPredicted RBP26.55■■□□□ 1.84
LDLRAD3-203ENST00000528989 SCARA5Q6ZMJ2 495 aa26.55■■□□□ 1.84
LDLRAD3-203ENST00000528989 CCDC150Q8NCX0 1101 aa26.55■■□□□ 1.84
LDLRAD3-203ENST00000528989 FBXL5Q9UKA1 691 aa26.55■■□□□ 1.84
LDLRAD3-203ENST00000528989 SCN1AP35498 2009 aa26.55■■□□□ 1.84
LDLRAD3-203ENST00000528989 HOXA2O43364 376 aa26.54■■□□□ 1.84
LDLRAD3-203ENST00000528989 ATICP31939 592 aa26.54■■□□□ 1.84
LDLRAD3-203ENST00000528989 E4F1Q66K89 784 aaPredicted RBP26.54■■□□□ 1.84
LDLRAD3-203ENST00000528989 PSRC1Q6PGN9 363 aaPredicted RBP26.54■■□□□ 1.84
LDLRAD3-203ENST00000528989 COLGALT2Q8IYK4 626 aa26.54■■□□□ 1.84
LDLRAD3-203ENST00000528989 CEP290O15078 2479 aa26.54■■□□□ 1.84
LDLRAD3-203ENST00000528989 PTMAP06454 111 aaKnown RBP26.53■■□□□ 1.84
LDLRAD3-203ENST00000528989 WEE2P0C1S8 567 aa26.53■■□□□ 1.84
LDLRAD3-203ENST00000528989 LILRA4P59901 499 aa26.53■■□□□ 1.84
LDLRAD3-203ENST00000528989 ZBED6P86452 979 aa26.53■■□□□ 1.84
LDLRAD3-203ENST00000528989 ZNF667Q5HYK9 610 aa26.53■■□□□ 1.84
LDLRAD3-203ENST00000528989 HASPINQ8TF76 798 aa26.53■■□□□ 1.84
LDLRAD3-203ENST00000528989 NRDE2Q9H7Z3 1164 aa26.53■■□□□ 1.84
LDLRAD3-203ENST00000528989 NR2E3Q9Y5X4 410 aa26.53■■□□□ 1.84
LDLRAD3-203ENST00000528989 FOXN3O00409 490 aaPredicted RBP26.53■■□□□ 1.84
LDLRAD3-203ENST00000528989 ITGB1P05556 798 aa26.53■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms