RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 COL16A1Q07092 1604 aaPredicted RBP18.92■□□□□ 0.62
LTBP3-210ENST00000528516 ARHGAP42A6NI28 874 aa18.92■□□□□ 0.62
LTBP3-210ENST00000528516 WFS1O76024 890 aa18.92■□□□□ 0.62
LTBP3-210ENST00000528516 ZBTB7AO95365 584 aa18.92■□□□□ 0.62
LTBP3-210ENST00000528516 ARP10275 920 aa18.92■□□□□ 0.62
LTBP3-210ENST00000528516 ETS2P15036 469 aa18.92■□□□□ 0.62
LTBP3-210ENST00000528516 SNRNP48Q6IEG0 339 aaKnown RBP18.92■□□□□ 0.62
LTBP3-210ENST00000528516 ASAP3Q8TDY4 903 aa18.92■□□□□ 0.62
LTBP3-210ENST00000528516 DCAF4Q8WV16 495 aa18.92■□□□□ 0.62
LTBP3-210ENST00000528516 HSPH1Q92598 858 aa18.92■□□□□ 0.62
LTBP3-210ENST00000528516 OPTNQ96CV9 577 aa18.92■□□□□ 0.62
LTBP3-210ENST00000528516 CBWD1Q9BRT8 395 aa18.92■□□□□ 0.62
LTBP3-210ENST00000528516 FGFBP2Q9BYJ0 223 aa18.92■□□□□ 0.62
LTBP3-210ENST00000528516 GANQ9H2C0 597 aa18.92■□□□□ 0.62
LTBP3-210ENST00000528516 DENND2DQ9H6A0 471 aaPredicted RBP18.92■□□□□ 0.62
LTBP3-210ENST00000528516 EYA4O95677 639 aa18.91■□□□□ 0.62
LTBP3-210ENST00000528516 SPDYCQ5MJ68 293 aa18.91■□□□□ 0.62
LTBP3-210ENST00000528516 ZDHHC24Q6UX98 284 aa18.91■□□□□ 0.62
LTBP3-210ENST00000528516 ARHGAP27Q6ZUM4 889 aa18.91■□□□□ 0.62
LTBP3-210ENST00000528516 HIPK4Q8NE63 616 aa18.91■□□□□ 0.62
LTBP3-210ENST00000528516 GRAMD1AQ96CP6 724 aa18.91■□□□□ 0.62
LTBP3-210ENST00000528516 CCDC134Q9H6E4 229 aa18.91■□□□□ 0.62
LTBP3-210ENST00000528516 TMEM165Q9HC07 324 aa18.91■□□□□ 0.62
LTBP3-210ENST00000528516 CFAP69A5D8W1 941 aa18.91■□□□□ 0.62
LTBP3-210ENST00000528516 E7ENQ6 273 aa18.91■□□□□ 0.62
LTBP3-210ENST00000528516 GYG2O15488 501 aa18.91■□□□□ 0.62
LTBP3-210ENST00000528516 ASNSP08243 561 aa18.91■□□□□ 0.62
LTBP3-210ENST00000528516 COMTP21964 271 aa18.91■□□□□ 0.62
LTBP3-210ENST00000528516 PON1P27169 355 aa18.91■□□□□ 0.62
LTBP3-210ENST00000528516 POLD1P28340 1107 aa18.91■□□□□ 0.62
LTBP3-210ENST00000528516 PSMC4P43686 418 aa18.91■□□□□ 0.62
LTBP3-210ENST00000528516 HES6Q96HZ4 224 aa18.91■□□□□ 0.62
LTBP3-210ENST00000528516 EPB41L4BQ9H329 900 aa18.91■□□□□ 0.62
LTBP3-210ENST00000528516 PHTF1Q9UMS5 762 aa18.91■□□□□ 0.62
LTBP3-210ENST00000528516 PDXKO00764 312 aa18.91■□□□□ 0.62
LTBP3-210ENST00000528516 DTNBP1Q96EV8 351 aa18.91■□□□□ 0.62
LTBP3-210ENST00000528516 NDNQ99608 321 aa18.91■□□□□ 0.62
LTBP3-210ENST00000528516 ROPN1BQ9BZX4 212 aaPredicted RBP18.91■□□□□ 0.62
LTBP3-210ENST00000528516 ROPN1Q9HAT0 212 aaPredicted RBP18.91■□□□□ 0.62
LTBP3-210ENST00000528516 LMCD1Q9NZU5 365 aa18.91■□□□□ 0.62
LTBP3-210ENST00000528516 SYNGAP1Q96PV0 1343 aa18.91■□□□□ 0.62
LTBP3-210ENST00000528516 GSTA2P09210 222 aa18.9■□□□□ 0.62
LTBP3-210ENST00000528516 AGPAT1Q99943 283 aa18.9■□□□□ 0.62
LTBP3-210ENST00000528516 SLCO1B3Q9NPD5 702 aa18.9■□□□□ 0.62
LTBP3-210ENST00000528516 RNF146Q9NTX7 359 aa18.9■□□□□ 0.62
LTBP3-210ENST00000528516 HEY1Q9Y5J3 304 aa18.9■□□□□ 0.62
LTBP3-210ENST00000528516 ITGB4P16144 1822 aa18.9■□□□□ 0.62
LTBP3-210ENST00000528516 A0A0G2JND7 137 aa18.9■□□□□ 0.62
LTBP3-210ENST00000528516 TAF1BQ53T94 588 aaPredicted RBP18.9■□□□□ 0.62
LTBP3-210ENST00000528516 RINT1Q6NUQ1 792 aa18.9■□□□□ 0.62
LTBP3-210ENST00000528516 ASRGL1Q7L266 308 aa18.9■□□□□ 0.62
LTBP3-210ENST00000528516 ANKMY2Q8IV38 441 aa18.9■□□□□ 0.62
LTBP3-210ENST00000528516 SLC20A1Q8WUM9 679 aa18.9■□□□□ 0.62
LTBP3-210ENST00000528516 MAGEB18Q96M61 343 aa18.9■□□□□ 0.62
LTBP3-210ENST00000528516 UBN1Q9NPG3 1134 aa18.9■□□□□ 0.62
LTBP3-210ENST00000528516 PCMTD2Q9NV79 361 aa18.9■□□□□ 0.62
LTBP3-210ENST00000528516 MTFR1Q15390 333 aa18.9■□□□□ 0.62
LTBP3-210ENST00000528516 PHLDB3Q6NSJ2 640 aa18.9■□□□□ 0.62
LTBP3-210ENST00000528516 RHOT2Q8IXI1 618 aa18.9■□□□□ 0.62
LTBP3-210ENST00000528516 SPOCK2Q92563 424 aa18.9■□□□□ 0.62
LTBP3-210ENST00000528516 UTP4Q969X6 686 aaKnown RBP18.9■□□□□ 0.62
LTBP3-210ENST00000528516 DDX27Q96GQ7 796 aaKnown RBP18.9■□□□□ 0.62
LTBP3-210ENST00000528516 TSNARE1Q96NA8 513 aa18.9■□□□□ 0.62
LTBP3-210ENST00000528516 FERMT1Q9BQL6 677 aa18.9■□□□□ 0.62
LTBP3-210ENST00000528516 DIS3Q9Y2L1 958 aaKnown RBP18.9■□□□□ 0.62
LTBP3-210ENST00000528516 MAGEA13PA6NCF6 341 aa18.89■□□□□ 0.61
LTBP3-210ENST00000528516 ABLIM1O14639 778 aa18.89■□□□□ 0.61
LTBP3-210ENST00000528516 DKC1O60832 514 aaKnown RBP eCLIP18.89■□□□□ 0.61
LTBP3-210ENST00000528516 RPA1P27694 616 aa18.89■□□□□ 0.61
LTBP3-210ENST00000528516 TPP2P29144 1249 aaPredicted RBP18.89■□□□□ 0.61
LTBP3-210ENST00000528516 SLC27A3Q5K4L6 730 aa18.89■□□□□ 0.61
LTBP3-210ENST00000528516 NME8Q8N427 588 aa18.89■□□□□ 0.61
LTBP3-210ENST00000528516 DHX38Q92620 1227 aaKnown RBP18.89■□□□□ 0.61
LTBP3-210ENST00000528516 ALG3Q92685 438 aa18.89■□□□□ 0.61
LTBP3-210ENST00000528516 UBE2OQ9C0C9 1292 aaKnown RBP18.89■□□□□ 0.61
LTBP3-210ENST00000528516 NPHS2Q9NP85 383 aa18.89■□□□□ 0.61
LTBP3-210ENST00000528516 MYO3BQ8WXR4 1341 aa18.89■□□□□ 0.61
LTBP3-210ENST00000528516 CNTNAP4Q9C0A0 1308 aa18.89■□□□□ 0.61
LTBP3-210ENST00000528516 KRT36O76013 467 aa18.89■□□□□ 0.61
LTBP3-210ENST00000528516 GNAZP19086 355 aa18.89■□□□□ 0.61
LTBP3-210ENST00000528516 FXR2P51116 673 aaKnown RBP eCLIP18.89■□□□□ 0.61
LTBP3-210ENST00000528516 RNF43Q68DV7 783 aa18.89■□□□□ 0.61
LTBP3-210ENST00000528516 CCDC62Q6P9F0 684 aa18.89■□□□□ 0.61
LTBP3-210ENST00000528516 FRMD5Q7Z6J6 570 aa18.89■□□□□ 0.61
LTBP3-210ENST00000528516 SERPINB12Q96P63 405 aa18.89■□□□□ 0.61
LTBP3-210ENST00000528516 WRNIP1Q96S55 665 aa18.89■□□□□ 0.61
LTBP3-210ENST00000528516 FZD1Q9UP38 647 aa18.89■□□□□ 0.61
LTBP3-210ENST00000528516 PPP4CP60510 307 aa18.89■□□□□ 0.61
LTBP3-210ENST00000528516 BAATQ14032 418 aaPredicted RBP18.89■□□□□ 0.61
LTBP3-210ENST00000528516 GEN1Q17RS7 908 aa18.89■□□□□ 0.61
LTBP3-210ENST00000528516 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.89■□□□□ 0.61
LTBP3-210ENST00000528516 SDCCAG8Q86SQ7 713 aaPredicted RBP18.89■□□□□ 0.61
LTBP3-210ENST00000528516 SP8Q8IXZ3 490 aa18.89■□□□□ 0.61
LTBP3-210ENST00000528516 CFAP61Q8NHU2 1237 aa18.89■□□□□ 0.61
LTBP3-210ENST00000528516 TTC17Q96AE7 1141 aa18.89■□□□□ 0.61
LTBP3-210ENST00000528516 LRMDAQ9H2I8 198 aa18.89■□□□□ 0.61
LTBP3-210ENST00000528516 SMYD2Q9NRG4 433 aa18.89■□□□□ 0.61
LTBP3-210ENST00000528516 APEX2Q9UBZ4 518 aa18.89■□□□□ 0.61
LTBP3-210ENST00000528516 HMGCS2P54868 508 aa18.88■□□□□ 0.61
LTBP3-210ENST00000528516 MAP7Q14244 749 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms