RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 TMC2Q8TDI7 906 aa9.86□□□□□ -0.83
CMTM1-210ENST00000528441 LRRC15Q8TF66 581 aa9.86□□□□□ -0.83
CMTM1-210ENST00000528441 CCDC47Q96A33 483 aaKnown RBP9.86□□□□□ -0.83
CMTM1-210ENST00000528441 PBXIP1Q96AQ6 731 aa9.86□□□□□ -0.83
CMTM1-210ENST00000528441 SAAL1Q96ER3 474 aa9.86□□□□□ -0.83
CMTM1-210ENST00000528441 SPATA32Q96LK8 384 aa9.86□□□□□ -0.83
CMTM1-210ENST00000528441 ZMAT2Q96NC0 199 aaKnown RBP9.86□□□□□ -0.83
CMTM1-210ENST00000528441 PYM1Q9BRP8 204 aaKnown RBP9.86□□□□□ -0.83
CMTM1-210ENST00000528441 FAM213AQ9BRX8 229 aa9.86□□□□□ -0.83
CMTM1-210ENST00000528441 CUEDC2Q9H467 287 aa9.86□□□□□ -0.83
CMTM1-210ENST00000528441 TMEM206Q9H813 350 aa9.86□□□□□ -0.83
CMTM1-210ENST00000528441 PLEKHA5Q9HAU0 1116 aa9.86□□□□□ -0.83
CMTM1-210ENST00000528441 CYP4F11Q9HBI6 524 aa9.86□□□□□ -0.83
CMTM1-210ENST00000528441 ZDHHC7Q9NXF8 308 aa9.86□□□□□ -0.83
CMTM1-210ENST00000528441 LIMD1Q9UGP4 676 aa9.86□□□□□ -0.83
CMTM1-210ENST00000528441 FBXL21Q9UKT6 434 aa9.86□□□□□ -0.83
CMTM1-210ENST00000528441 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.86□□□□□ -0.83
CMTM1-210ENST00000528441 XIRP2A4UGR9 3374 aa9.86□□□□□ -0.83
CMTM1-210ENST00000528441 NCOR1O75376 2440 aa9.85□□□□□ -0.83
CMTM1-210ENST00000528441 ARHGEF37A1IGU5 675 aa9.85□□□□□ -0.83
CMTM1-210ENST00000528441 GOLGA8IPA6NC78 632 aa9.85□□□□□ -0.83
CMTM1-210ENST00000528441 TMEM221A6NGB7 291 aa9.85□□□□□ -0.83
CMTM1-210ENST00000528441 GOLGA8JA6NMD2 632 aa9.85□□□□□ -0.83
CMTM1-210ENST00000528441 PRR33A8MZF0 331 aa9.85□□□□□ -0.83
CMTM1-210ENST00000528441 TISP43B9A030 160 aa9.85□□□□□ -0.83
CMTM1-210ENST00000528441 M0R296 226 aa9.85□□□□□ -0.83
CMTM1-210ENST00000528441 SYN3O14994 580 aa9.85□□□□□ -0.83
CMTM1-210ENST00000528441 GPR37L1O60883 481 aa9.85□□□□□ -0.83
CMTM1-210ENST00000528441 LILRB3O75022 631 aa9.85□□□□□ -0.83
CMTM1-210ENST00000528441 ASGR2P07307 311 aa9.85□□□□□ -0.83
CMTM1-210ENST00000528441 KRT19P08727 400 aa9.85□□□□□ -0.83
CMTM1-210ENST00000528441 TMEM191BP0C7N4 346 aa9.85□□□□□ -0.83
CMTM1-210ENST00000528441 ODC1P11926 461 aa9.85□□□□□ -0.83
CMTM1-210ENST00000528441 FSHRP23945 695 aa9.85□□□□□ -0.83
CMTM1-210ENST00000528441 ZXDAP98168 799 aa9.85□□□□□ -0.83
CMTM1-210ENST00000528441 TFAMQ00059 246 aaKnown RBP9.85□□□□□ -0.83
CMTM1-210ENST00000528441 YWHAHQ04917 246 aaPredicted RBP9.85□□□□□ -0.83
CMTM1-210ENST00000528441 PKP1Q13835 747 aa9.85□□□□□ -0.83
CMTM1-210ENST00000528441 PTPN21Q16825 1174 aa9.85□□□□□ -0.83
CMTM1-210ENST00000528441 ZBTB41Q5SVQ8 909 aa9.85□□□□□ -0.83
CMTM1-210ENST00000528441 AXDND1Q5T1B0 1012 aaPredicted RBP9.85□□□□□ -0.83
CMTM1-210ENST00000528441 ATL3Q6DD88 541 aa9.85□□□□□ -0.83
CMTM1-210ENST00000528441 JADE1Q6IE81 842 aa9.85□□□□□ -0.83
CMTM1-210ENST00000528441 ZNF720Q7Z2F6 126 aa9.85□□□□□ -0.83
CMTM1-210ENST00000528441 GRASPQ7Z6J2 395 aaPredicted RBP9.85□□□□□ -0.83
CMTM1-210ENST00000528441 METTL23Q86XA0 190 aa9.85□□□□□ -0.83
CMTM1-210ENST00000528441 RNF168Q8IYW5 571 aaPredicted RBP9.85□□□□□ -0.83
CMTM1-210ENST00000528441 C3orf58Q8NDZ4 430 aa9.85□□□□□ -0.83
CMTM1-210ENST00000528441 HDAC7Q8WUI4 952 aa9.85□□□□□ -0.83
CMTM1-210ENST00000528441 EDAQ92838 391 aa9.85□□□□□ -0.83
CMTM1-210ENST00000528441 MFSD14AQ96MC6 490 aa9.85□□□□□ -0.83
CMTM1-210ENST00000528441 BLZF1Q9H2G9 400 aa9.85□□□□□ -0.83
CMTM1-210ENST00000528441 PCIF1Q9H4Z3 704 aa9.85□□□□□ -0.83
CMTM1-210ENST00000528441 RBAKQ9NYW8 714 aaPredicted RBP9.85□□□□□ -0.83
CMTM1-210ENST00000528441 MTRRQ9UBK8 725 aa9.85□□□□□ -0.83
CMTM1-210ENST00000528441 RAPGEFL1Q9UHV5 662 aa9.85□□□□□ -0.83
CMTM1-210ENST00000528441 FBXW11Q9UKB1 542 aa9.85□□□□□ -0.83
CMTM1-210ENST00000528441 SORCS3Q9UPU3 1222 aa9.85□□□□□ -0.83
CMTM1-210ENST00000528441 PDCD11Q14690 1871 aaKnown RBP9.85□□□□□ -0.83
CMTM1-210ENST00000528441 C2orf16Q68DN1 1984 aa9.84□□□□□ -0.83
CMTM1-210ENST00000528441 VWA8A3KMH1 1905 aa9.84□□□□□ -0.83
CMTM1-210ENST00000528441 TCHHQ07283 1943 aa9.84□□□□□ -0.83
CMTM1-210ENST00000528441 MTCL1Q9Y4B5 1905 aaKnown RBP9.84□□□□□ -0.83
CMTM1-210ENST00000528441 A0A087X0B3 334 aa9.84□□□□□ -0.83
CMTM1-210ENST00000528441 A0A0B4J269 797 aa9.84□□□□□ -0.83
CMTM1-210ENST00000528441 GOLGA6L4A6NEF3 574 aa9.84□□□□□ -0.83
CMTM1-210ENST00000528441 ANKRD63C9JTQ0 380 aa9.84□□□□□ -0.83
CMTM1-210ENST00000528441 ABLIM1O14639 778 aa9.84□□□□□ -0.83
CMTM1-210ENST00000528441 ZMYND10O75800 440 aa9.84□□□□□ -0.83
CMTM1-210ENST00000528441 LDHAP00338 332 aaKnown RBP9.84□□□□□ -0.83
CMTM1-210ENST00000528441 PIGRP01833 764 aa9.84□□□□□ -0.83
CMTM1-210ENST00000528441 NFICP08651 508 aa9.84□□□□□ -0.83
CMTM1-210ENST00000528441 FGFR3P22607 806 aa9.84□□□□□ -0.83
CMTM1-210ENST00000528441 SIGLEC14Q08ET2 396 aa9.84□□□□□ -0.83
CMTM1-210ENST00000528441 NAB2Q15742 525 aa9.84□□□□□ -0.83
CMTM1-210ENST00000528441 ENOX2Q16206 610 aaKnown RBP9.84□□□□□ -0.83
CMTM1-210ENST00000528441 IQCEQ6IPM2 695 aa9.84□□□□□ -0.83
CMTM1-210ENST00000528441 CYP26C1Q6V0L0 522 aa9.84□□□□□ -0.83
CMTM1-210ENST00000528441 NELFCDQ8IXH7 590 aa9.84□□□□□ -0.83
CMTM1-210ENST00000528441 GPR65Q8IYL9 337 aa9.84□□□□□ -0.83
CMTM1-210ENST00000528441 CMASQ8NFW8 434 aaPredicted RBP9.84□□□□□ -0.83
CMTM1-210ENST00000528441 FAM200AQ8TCP9 573 aa9.84□□□□□ -0.83
CMTM1-210ENST00000528441 CACTINQ8WUQ7 758 aaKnown RBP9.84□□□□□ -0.83
CMTM1-210ENST00000528441 CCDC34Q96HJ3 373 aa9.84□□□□□ -0.83
CMTM1-210ENST00000528441 ZNF560Q96MR9 790 aa9.84□□□□□ -0.83
CMTM1-210ENST00000528441 CLSTN3Q9BQT9 956 aa9.84□□□□□ -0.83
CMTM1-210ENST00000528441 PRKD2Q9BZL6 878 aa9.84□□□□□ -0.83
CMTM1-210ENST00000528441 HAPLN2Q9GZV7 340 aa9.84□□□□□ -0.83
CMTM1-210ENST00000528441 MAGEF1Q9HAY2 307 aa9.84□□□□□ -0.83
CMTM1-210ENST00000528441 EXOC1Q9NV70 894 aa9.84□□□□□ -0.83
CMTM1-210ENST00000528441 PCDHA7Q9UN72 937 aa9.84□□□□□ -0.83
CMTM1-210ENST00000528441 USTQ9Y2C2 406 aa9.84□□□□□ -0.83
CMTM1-210ENST00000528441 TIMM13Q9Y5L4 95 aaPredicted RBP9.84□□□□□ -0.83
CMTM1-210ENST00000528441 TTC26A0AVF1 554 aa9.83□□□□□ -0.84
CMTM1-210ENST00000528441 ADAM12O43184 909 aa9.83□□□□□ -0.84
CMTM1-210ENST00000528441 IL18RAPO95256 599 aa9.83□□□□□ -0.84
CMTM1-210ENST00000528441 HNRNPA1P09651 372 aaKnown RBP eCLIP9.83□□□□□ -0.84
CMTM1-210ENST00000528441 CYP3A5P20815 502 aa9.83□□□□□ -0.84
CMTM1-210ENST00000528441 TAF6P49848 677 aa9.83□□□□□ -0.84
CMTM1-210ENST00000528441 ROR1Q01973 937 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms