RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 SPATA1Q5VX52 437 aa35.9■■■■□ 3.34
SSSCA1-205ENST00000527920 RSPO2Q6UXX9 243 aaPredicted RBP35.9■■■■□ 3.34
SSSCA1-205ENST00000527920 TRIM67Q6ZTA4 783 aa35.9■■■■□ 3.34
SSSCA1-205ENST00000527920 APPL2Q8NEU8 664 aa35.9■■■■□ 3.34
SSSCA1-205ENST00000527920 POMGNT1Q8WZA1 660 aa35.9■■■■□ 3.34
SSSCA1-205ENST00000527920 DHX58Q96C10 678 aa35.9■■■■□ 3.34
SSSCA1-205ENST00000527920 SORCS3Q9UPU3 1222 aa35.9■■■■□ 3.34
SSSCA1-205ENST00000527920 C2CD2Q9Y426 696 aa35.9■■■■□ 3.34
SSSCA1-205ENST00000527920 C8AP07357 584 aa35.89■■■■□ 3.34
SSSCA1-205ENST00000527920 PAX3P23760 479 aa35.89■■■■□ 3.34
SSSCA1-205ENST00000527920 CASP5P51878 434 aa35.89■■■■□ 3.34
SSSCA1-205ENST00000527920 KCNA1Q09470 495 aa35.89■■■■□ 3.34
SSSCA1-205ENST00000527920 RESP18Q5W5W9 173 aa35.89■■■■□ 3.34
SSSCA1-205ENST00000527920 BEST2Q8NFU1 509 aa35.89■■■■□ 3.34
SSSCA1-205ENST00000527920 PYM1Q9BRP8 204 aaKnown RBP35.89■■■■□ 3.34
SSSCA1-205ENST00000527920 FAM13BQ9NYF5 915 aa35.89■■■■□ 3.34
SSSCA1-205ENST00000527920 PCDHB8Q9UN66 801 aa35.89■■■■□ 3.34
SSSCA1-205ENST00000527920 TRIOO75962 3097 aa35.89■■■■□ 3.34
SSSCA1-205ENST00000527920 M0QZQ0 153 aa35.88■■■■□ 3.33
SSSCA1-205ENST00000527920 ACOT2P49753 483 aa35.88■■■■□ 3.33
SSSCA1-205ENST00000527920 SIGLEC14Q08ET2 396 aa35.88■■■■□ 3.33
SSSCA1-205ENST00000527920 JADE1Q6IE81 842 aa35.88■■■■□ 3.33
SSSCA1-205ENST00000527920 BMP8AQ7Z5Y6 402 aa35.88■■■■□ 3.33
SSSCA1-205ENST00000527920 PIDD1Q9HB75 910 aa35.88■■■■□ 3.33
SSSCA1-205ENST00000527920 MTMR3Q13615 1198 aa35.87■■■■□ 3.33
SSSCA1-205ENST00000527920 TMEM132DQ14C87 1099 aa35.87■■■■□ 3.33
SSSCA1-205ENST00000527920 STXBP4Q6ZWJ1 553 aa35.87■■■■□ 3.33
SSSCA1-205ENST00000527920 UBALD2Q8IYN6 164 aa35.87■■■■□ 3.33
SSSCA1-205ENST00000527920 IKZF4Q9H2S9 585 aa35.87■■■■□ 3.33
SSSCA1-205ENST00000527920 TMEM206Q9H813 350 aa35.87■■■■□ 3.33
SSSCA1-205ENST00000527920 POLR2DO15514 142 aaKnown RBP35.86■■■■□ 3.33
SSSCA1-205ENST00000527920 GARTP22102 1010 aa35.86■■■■□ 3.33
SSSCA1-205ENST00000527920 PPM1LQ5SGD2 360 aa35.86■■■■□ 3.33
SSSCA1-205ENST00000527920 CRELD2Q6UXH1 353 aaPredicted RBP35.86■■■■□ 3.33
SSSCA1-205ENST00000527920 ZNF461Q8TAF7 563 aa35.86■■■■□ 3.33
SSSCA1-205ENST00000527920 FAM212AQ96EL1 285 aa35.86■■■■□ 3.33
SSSCA1-205ENST00000527920 C7orf25Q9BPX7 421 aa35.86■■■■□ 3.33
SSSCA1-205ENST00000527920 LIMD1Q9UGP4 676 aa35.86■■■■□ 3.33
SSSCA1-205ENST00000527920 ARIH1Q9Y4X5 557 aaPredicted RBP35.86■■■■□ 3.33
SSSCA1-205ENST00000527920 ROR1Q01973 937 aa35.85■■■■□ 3.33
SSSCA1-205ENST00000527920 ZNF280DQ6N043 979 aa35.85■■■■□ 3.33
SSSCA1-205ENST00000527920 SLC7A14Q8TBB6 771 aa35.85■■■■□ 3.33
SSSCA1-205ENST00000527920 OXCT2Q9BYC2 517 aaPredicted RBP35.85■■■■□ 3.33
SSSCA1-205ENST00000527920 FGFBP2Q9BYJ0 223 aa35.85■■■■□ 3.33
SSSCA1-205ENST00000527920 ZDHHC9Q9Y397 364 aa35.85■■■■□ 3.33
SSSCA1-205ENST00000527920 HCN4Q9Y3Q4 1203 aa35.85■■■■□ 3.33
SSSCA1-205ENST00000527920 TMEM221A6NGB7 291 aa35.84■■■■□ 3.33
SSSCA1-205ENST00000527920 M0R296 226 aa35.84■■■■□ 3.33
SSSCA1-205ENST00000527920 XYLBO75191 536 aa35.84■■■■□ 3.33
SSSCA1-205ENST00000527920 ABLIM3O94929 683 aa35.84■■■■□ 3.33
SSSCA1-205ENST00000527920 NFICP08651 508 aa35.84■■■■□ 3.33
SSSCA1-205ENST00000527920 HFE2Q6ZVN8 426 aa35.84■■■■□ 3.33
SSSCA1-205ENST00000527920 NT5DC4Q86YG4 428 aa35.84■■■■□ 3.33
SSSCA1-205ENST00000527920 SYCP3Q8IZU3 236 aa35.84■■■■□ 3.33
SSSCA1-205ENST00000527920 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP35.84■■■■□ 3.33
SSSCA1-205ENST00000527920 EPS15L1Q9UBC2 864 aa35.84■■■■□ 3.33
SSSCA1-205ENST00000527920 FBXL5Q9UKA1 691 aa35.84■■■■□ 3.33
SSSCA1-205ENST00000527920 N4BP1O75113 896 aaKnown RBP35.83■■■■□ 3.33
SSSCA1-205ENST00000527920 IL18RAPO95256 599 aa35.83■■■■□ 3.33
SSSCA1-205ENST00000527920 LDHAP00338 332 aaKnown RBP35.83■■■■□ 3.33
SSSCA1-205ENST00000527920 ASIC1P78348 528 aa35.83■■■■□ 3.33
SSSCA1-205ENST00000527920 CTXN3Q4LDR2 81 aa35.83■■■■□ 3.33
SSSCA1-205ENST00000527920 TPGS2Q68CL5 300 aa35.83■■■■□ 3.33
SSSCA1-205ENST00000527920 MAFFQ9ULX9 164 aa35.83■■■■□ 3.33
SSSCA1-205ENST00000527920 OAZ2O95190 189 aa35.82■■■■□ 3.32
SSSCA1-205ENST00000527920 GUCY2FP51841 1108 aa35.82■■■■□ 3.32
SSSCA1-205ENST00000527920 MFSD14AQ96MC6 490 aa35.82■■■■□ 3.32
SSSCA1-205ENST00000527920 KCNH3Q9ULD8 1083 aa35.82■■■■□ 3.32
SSSCA1-205ENST00000527920 ANO9A1A5B4 782 aa35.81■■■■□ 3.32
SSSCA1-205ENST00000527920 WDR27A2RRH5 827 aa35.81■■■■□ 3.32
SSSCA1-205ENST00000527920 KIAA0391O15091 583 aaKnown RBP35.81■■■■□ 3.32
SSSCA1-205ENST00000527920 EIF3DO15371 548 aaKnown RBP eCLIP35.81■■■■□ 3.32
SSSCA1-205ENST00000527920 KRT85P78386 507 aa35.81■■■■□ 3.32
SSSCA1-205ENST00000527920 C9orf57Q5W0N0 161 aa35.81■■■■□ 3.32
SSSCA1-205ENST00000527920 TMEM130Q8N3G9 435 aa35.81■■■■□ 3.32
SSSCA1-205ENST00000527920 ASIC4Q96FT7 647 aa35.81■■■■□ 3.32
SSSCA1-205ENST00000527920 IGSF9Q9P2J2 1179 aa35.81■■■■□ 3.32
SSSCA1-205ENST00000527920 ATP6V1DQ9Y5K8 247 aa35.81■■■■□ 3.32
SSSCA1-205ENST00000527920 PIRO00625 290 aa35.8■■■■□ 3.32
SSSCA1-205ENST00000527920 PRPF6O94906 941 aaKnown RBP35.8■■■■□ 3.32
SSSCA1-205ENST00000527920 ASGR2P07307 311 aa35.8■■■■□ 3.32
SSSCA1-205ENST00000527920 ATF2P15336 505 aa35.8■■■■□ 3.32
SSSCA1-205ENST00000527920 TYMPP19971 482 aa35.8■■■■□ 3.32
SSSCA1-205ENST00000527920 LILRA4P59901 499 aa35.8■■■■□ 3.32
SSSCA1-205ENST00000527920 YWHAHQ04917 246 aaPredicted RBP35.8■■■■□ 3.32
SSSCA1-205ENST00000527920 EHHADHQ08426 723 aa35.8■■■■□ 3.32
SSSCA1-205ENST00000527920 BRSK2Q8IWQ3 736 aa35.8■■■■□ 3.32
SSSCA1-205ENST00000527920 LEO1Q8WVC0 666 aaPredicted RBP35.8■■■■□ 3.32
SSSCA1-205ENST00000527920 ARHGEF37A1IGU5 675 aa35.79■■■■□ 3.32
SSSCA1-205ENST00000527920 GBP2P32456 591 aaPredicted RBP35.79■■■■□ 3.32
SSSCA1-205ENST00000527920 FAM26FQ5R3K3 315 aa35.79■■■■□ 3.32
SSSCA1-205ENST00000527920 UNC13DQ70J99 1090 aa35.79■■■■□ 3.32
SSSCA1-205ENST00000527920 EPM2AIP1Q7L775 607 aaPredicted RBP35.79■■■■□ 3.32
SSSCA1-205ENST00000527920 TCEAL8Q8IYN2 117 aa35.79■■■■□ 3.32
SSSCA1-205ENST00000527920 MYADMQ96S97 322 aa35.79■■■■□ 3.32
SSSCA1-205ENST00000527920 FAM213AQ9BRX8 229 aa35.79■■■■□ 3.32
SSSCA1-205ENST00000527920 ZFP37Q9Y6Q3 630 aaPredicted RBP35.79■■■■□ 3.32
SSSCA1-205ENST00000527920 PPEF2O14830 753 aa35.78■■■■□ 3.32
SSSCA1-205ENST00000527920 ELF1P32519 619 aa35.78■■■■□ 3.32
SSSCA1-205ENST00000527920 DSTYKQ6XUX3 929 aa35.78■■■■□ 3.32
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms