RNA–Protein interactions for RNA: ENST00000527699.5

CAPN1-210, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-210ENST00000527699 MAGEA9P43362 315 aa10.88□□□□□ -0.67
CAPN1-210ENST00000527699 NAMPTP43490 491 aa10.88□□□□□ -0.67
CAPN1-210ENST00000527699 SOX4Q06945 474 aaPredicted RBP10.88□□□□□ -0.67
CAPN1-210ENST00000527699 GNL2Q13823 731 aaKnown RBP10.88□□□□□ -0.67
CAPN1-210ENST00000527699 ZRSR1Q15695 479 aaKnown RBP10.88□□□□□ -0.67
CAPN1-210ENST00000527699 FAM187BQ17R55 369 aa10.88□□□□□ -0.67
CAPN1-210ENST00000527699 ATF7IP2Q5U623 682 aa10.88□□□□□ -0.67
CAPN1-210ENST00000527699 TANGO2Q6ICL3 276 aa10.88□□□□□ -0.67
CAPN1-210ENST00000527699 TPRG1Q6ZUI0 275 aa10.88□□□□□ -0.67
CAPN1-210ENST00000527699 NPAS3Q8IXF0 933 aa10.88□□□□□ -0.67
CAPN1-210ENST00000527699 HS6ST3Q8IZP7 471 aa10.88□□□□□ -0.67
CAPN1-210ENST00000527699 NELL1Q92832 810 aa10.88□□□□□ -0.67
CAPN1-210ENST00000527699 C18orf25Q96B23 403 aaPredicted RBP10.88□□□□□ -0.67
CAPN1-210ENST00000527699 TCEAL4Q96EI5 215 aa10.88□□□□□ -0.67
CAPN1-210ENST00000527699 DDX27Q96GQ7 796 aaKnown RBP10.88□□□□□ -0.67
CAPN1-210ENST00000527699 IFT74Q96LB3 600 aa10.88□□□□□ -0.67
CAPN1-210ENST00000527699 PRIMPOLQ96LW4 560 aa10.88□□□□□ -0.67
CAPN1-210ENST00000527699 CORO1BQ9BR76 489 aa10.88□□□□□ -0.67
CAPN1-210ENST00000527699 POLR3CQ9BUI4 534 aaPredicted RBP10.88□□□□□ -0.67
CAPN1-210ENST00000527699 LSM14BQ9BX40 385 aaKnown RBP10.88□□□□□ -0.67
CAPN1-210ENST00000527699 BHMT2Q9H2M3 363 aa10.88□□□□□ -0.67
CAPN1-210ENST00000527699 HEBP1Q9NRV9 189 aa10.88□□□□□ -0.67
CAPN1-210ENST00000527699 HECTD1Q9ULT8 2610 aa10.88□□□□□ -0.67
CAPN1-210ENST00000527699 NDRG2Q9UN36 371 aaKnown RBP10.88□□□□□ -0.67
CAPN1-210ENST00000527699 KIAA1024Q9UPX6 916 aa10.88□□□□□ -0.67
CAPN1-210ENST00000527699 MTCL1Q9Y4B5 1905 aaKnown RBP10.88□□□□□ -0.67
CAPN1-210ENST00000527699 PRRG1O14668 218 aa10.87□□□□□ -0.67
CAPN1-210ENST00000527699 GIPC1O14908 333 aa10.87□□□□□ -0.67
CAPN1-210ENST00000527699 SEC24AO95486 1093 aa10.87□□□□□ -0.67
CAPN1-210ENST00000527699 XRCC6P12956 609 aaKnown RBP eCLIP10.87□□□□□ -0.67
CAPN1-210ENST00000527699 FGFR3P22607 806 aa10.87□□□□□ -0.67
CAPN1-210ENST00000527699 TARSP26639 723 aaKnown RBP10.87□□□□□ -0.67
CAPN1-210ENST00000527699 CDC25AP30304 524 aa10.87□□□□□ -0.67
CAPN1-210ENST00000527699 PEX3P56589 373 aa10.87□□□□□ -0.67
CAPN1-210ENST00000527699 SPAG1Q07617 926 aa10.87□□□□□ -0.67
CAPN1-210ENST00000527699 RAD51AP2Q09MP3 1159 aa10.87□□□□□ -0.67
CAPN1-210ENST00000527699 RAB33AQ14088 237 aa10.87□□□□□ -0.67
CAPN1-210ENST00000527699 SAFBQ15424 915 aaKnown RBP eCLIP10.87□□□□□ -0.67
CAPN1-210ENST00000527699 TTC38Q5R3I4 469 aa10.87□□□□□ -0.67
CAPN1-210ENST00000527699 ZBTB41Q5SVQ8 909 aa10.87□□□□□ -0.67
CAPN1-210ENST00000527699 KIAA1211LQ6NV74 962 aa10.87□□□□□ -0.67
CAPN1-210ENST00000527699 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.87□□□□□ -0.67
CAPN1-210ENST00000527699 ERMNQ8TAM6 284 aa10.87□□□□□ -0.67
CAPN1-210ENST00000527699 C8orf76Q96K31 380 aa10.87□□□□□ -0.67
CAPN1-210ENST00000527699 ZBTB45Q96K62 511 aaPredicted RBP10.87□□□□□ -0.67
CAPN1-210ENST00000527699 PPP1R10Q96QC0 940 aaKnown RBP10.87□□□□□ -0.67
CAPN1-210ENST00000527699 PLIN2Q99541 437 aa10.87□□□□□ -0.67
CAPN1-210ENST00000527699 TARS2Q9BW92 718 aaKnown RBP10.87□□□□□ -0.67
CAPN1-210ENST00000527699 RHOBTB2Q9BYZ6 727 aa10.87□□□□□ -0.67
CAPN1-210ENST00000527699 RXFP3Q9NSD7 469 aa10.87□□□□□ -0.67
CAPN1-210ENST00000527699 DDX19AQ9NUU7 478 aaKnown RBP10.87□□□□□ -0.67
CAPN1-210ENST00000527699 MTRRQ9UBK8 725 aa10.87□□□□□ -0.67
CAPN1-210ENST00000527699 GPSM3Q9Y4H4 160 aa10.87□□□□□ -0.67
CAPN1-210ENST00000527699 WDFY3Q8IZQ1 3526 aa10.87□□□□□ -0.67
CAPN1-210ENST00000527699 MYH15Q9Y2K3 1946 aa10.87□□□□□ -0.67
CAPN1-210ENST00000527699 DOCK8Q8NF50 2099 aa10.86□□□□□ -0.67
CAPN1-210ENST00000527699 GREB1Q4ZG55 1949 aa10.86□□□□□ -0.67
CAPN1-210ENST00000527699 TICRRQ7Z2Z1 1910 aa10.86□□□□□ -0.67
CAPN1-210ENST00000527699 SMIM28A0A1B0GU29 152 aa10.86□□□□□ -0.67
CAPN1-210ENST00000527699 K7ERI5 159 aa10.86□□□□□ -0.67
CAPN1-210ENST00000527699 PODXLO00592 558 aa10.86□□□□□ -0.67
CAPN1-210ENST00000527699 NCAM2O15394 837 aa10.86□□□□□ -0.67
CAPN1-210ENST00000527699 LRG1P02750 347 aa10.86□□□□□ -0.67
CAPN1-210ENST00000527699 PRB1P04280 392 aa10.86□□□□□ -0.67
CAPN1-210ENST00000527699 RPA1P27694 616 aa10.86□□□□□ -0.67
CAPN1-210ENST00000527699 ELF1P32519 619 aa10.86□□□□□ -0.67
CAPN1-210ENST00000527699 YARSP54577 528 aaKnown RBP10.86□□□□□ -0.67
CAPN1-210ENST00000527699 ELAVL2Q12926 359 aaKnown RBP10.86□□□□□ -0.67
CAPN1-210ENST00000527699 PPP2R5DQ14738 602 aa10.86□□□□□ -0.67
CAPN1-210ENST00000527699 UPP1Q16831 310 aa10.86□□□□□ -0.67
CAPN1-210ENST00000527699 DCAF4L1Q3SXM0 396 aa10.86□□□□□ -0.67
CAPN1-210ENST00000527699 ZNF568Q3ZCX4 644 aa10.86□□□□□ -0.67
CAPN1-210ENST00000527699 MTSS1LQ765P7 747 aa10.86□□□□□ -0.67
CAPN1-210ENST00000527699 SNX29Q8TEQ0 813 aa10.86□□□□□ -0.67
CAPN1-210ENST00000527699 ZMAT2Q96NC0 199 aaKnown RBP10.86□□□□□ -0.67
CAPN1-210ENST00000527699 TCHPQ9BT92 498 aa10.86□□□□□ -0.67
CAPN1-210ENST00000527699 MKNK1Q9BUB5 465 aa10.86□□□□□ -0.67
CAPN1-210ENST00000527699 CDT1Q9H211 546 aa10.86□□□□□ -0.67
CAPN1-210ENST00000527699 CYP4F11Q9HBI6 524 aa10.86□□□□□ -0.67
CAPN1-210ENST00000527699 LTB4R2Q9NPC1 389 aa10.86□□□□□ -0.67
CAPN1-210ENST00000527699 PRMT8Q9NR22 394 aaPredicted RBP10.86□□□□□ -0.67
CAPN1-210ENST00000527699 LRWD1Q9UFC0 647 aa10.86□□□□□ -0.67
CAPN1-210ENST00000527699 VWA8A3KMH1 1905 aa10.86□□□□□ -0.67
CAPN1-210ENST00000527699 WDR27A2RRH5 827 aa10.85□□□□□ -0.67
CAPN1-210ENST00000527699 TULP1O00294 542 aaPredicted RBP10.85□□□□□ -0.67
CAPN1-210ENST00000527699 SLC16A4O15374 487 aa10.85□□□□□ -0.67
CAPN1-210ENST00000527699 HIP1RO75146 1068 aa10.85□□□□□ -0.67
CAPN1-210ENST00000527699 PAPLNO95428 1278 aa10.85□□□□□ -0.67
CAPN1-210ENST00000527699 OR4Q2P0C623 313 aa10.85□□□□□ -0.67
CAPN1-210ENST00000527699 MYL4P12829 197 aa10.85□□□□□ -0.67
CAPN1-210ENST00000527699 VIPR2P41587 438 aa10.85□□□□□ -0.67
CAPN1-210ENST00000527699 CCR2P41597 374 aa10.85□□□□□ -0.67
CAPN1-210ENST00000527699 ROR1Q01973 937 aa10.85□□□□□ -0.67
CAPN1-210ENST00000527699 PPP2R5AQ15172 486 aa10.85□□□□□ -0.67
CAPN1-210ENST00000527699 PDXDC1Q6P996 788 aa10.85□□□□□ -0.67
CAPN1-210ENST00000527699 CEP68Q76N32 757 aa10.85□□□□□ -0.67
CAPN1-210ENST00000527699 TAS1R3Q7RTX0 852 aa10.85□□□□□ -0.67
CAPN1-210ENST00000527699 GPR65Q8IYL9 337 aa10.85□□□□□ -0.67
CAPN1-210ENST00000527699 TTC8Q8TAM2 541 aa10.85□□□□□ -0.67
CAPN1-210ENST00000527699 ZSWIM3Q96MP5 696 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms