RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 REXO4Q9GZR2 422 aaKnown RBP7.59□□□□□ -1.19
CTNND1-216ENST00000527467 EPN3Q9H201 632 aa7.59□□□□□ -1.19
CTNND1-216ENST00000527467 PLEKHA5Q9HAU0 1116 aa7.59□□□□□ -1.19
CTNND1-216ENST00000527467 MLXIPLQ9NP71 852 aa7.59□□□□□ -1.19
CTNND1-216ENST00000527467 GPRC5DQ9NZD1 345 aa7.59□□□□□ -1.19
CTNND1-216ENST00000527467 VAV3Q9UKW4 847 aa7.59□□□□□ -1.19
CTNND1-216ENST00000527467 PITPNM2Q9BZ72 1349 aa7.59□□□□□ -1.19
CTNND1-216ENST00000527467 EYA2O00167 538 aa7.59□□□□□ -1.19
CTNND1-216ENST00000527467 SLC27A2O14975 620 aa7.59□□□□□ -1.19
CTNND1-216ENST00000527467 MSR1P21757 451 aa7.59□□□□□ -1.19
CTNND1-216ENST00000527467 ALDH18A1P54886 795 aaKnown RBP7.59□□□□□ -1.19
CTNND1-216ENST00000527467 RBL2Q08999 1139 aa7.59□□□□□ -1.19
CTNND1-216ENST00000527467 RBBP7Q16576 425 aa7.59□□□□□ -1.19
CTNND1-216ENST00000527467 ZNF544Q6NX49 715 aa7.59□□□□□ -1.19
CTNND1-216ENST00000527467 LAYNQ6UX15 382 aa7.59□□□□□ -1.19
CTNND1-216ENST00000527467 WDR36Q8NI36 951 aaKnown RBP7.59□□□□□ -1.19
CTNND1-216ENST00000527467 RNASE11Q8TAA1 199 aaKnown RBP7.59□□□□□ -1.19
CTNND1-216ENST00000527467 RIN3Q8TB24 985 aa7.59□□□□□ -1.19
CTNND1-216ENST00000527467 SYMPKQ92797 1274 aaKnown RBP7.59□□□□□ -1.19
CTNND1-216ENST00000527467 PSD3Q9NYI0 1048 aa7.59□□□□□ -1.19
CTNND1-216ENST00000527467 SUPT3HB4E1H0 165 aa7.59□□□□□ -1.19
CTNND1-216ENST00000527467 KLHL2O95198 593 aa7.59□□□□□ -1.19
CTNND1-216ENST00000527467 FGGP02679 453 aa7.59□□□□□ -1.19
CTNND1-216ENST00000527467 CPA1P15085 419 aa7.59□□□□□ -1.19
CTNND1-216ENST00000527467 QARSP47897 775 aaKnown RBP7.59□□□□□ -1.19
CTNND1-216ENST00000527467 ARF3P61204 181 aaPredicted RBP7.59□□□□□ -1.19
CTNND1-216ENST00000527467 ARF1P84077 181 aaKnown RBP7.59□□□□□ -1.19
CTNND1-216ENST00000527467 DMP1Q13316 513 aaPredicted RBP7.59□□□□□ -1.19
CTNND1-216ENST00000527467 RASGRF1Q13972 1273 aa7.59□□□□□ -1.19
CTNND1-216ENST00000527467 ATP13A5Q4VNC0 1218 aa7.59□□□□□ -1.19
CTNND1-216ENST00000527467 TAS2R42Q7RTR8 314 aa7.59□□□□□ -1.19
CTNND1-216ENST00000527467 CCDC36Q8IYA8 594 aa7.59□□□□□ -1.19
CTNND1-216ENST00000527467 PPM1NQ8N819 430 aa7.59□□□□□ -1.19
CTNND1-216ENST00000527467 CCDC28BQ9BUN5 200 aa7.59□□□□□ -1.19
CTNND1-216ENST00000527467 USP44Q9H0E7 712 aa7.59□□□□□ -1.19
CTNND1-216ENST00000527467 ATP8A2Q9NTI2 1148 aa7.59□□□□□ -1.19
CTNND1-216ENST00000527467 ZFATQ9P243 1243 aa7.59□□□□□ -1.19
CTNND1-216ENST00000527467 APPL1Q9UKG1 709 aa7.59□□□□□ -1.19
CTNND1-216ENST00000527467 DTNAQ9Y4J8 743 aa7.59□□□□□ -1.19
CTNND1-216ENST00000527467 QRICH2Q9H0J4 1663 aa7.59□□□□□ -1.19
CTNND1-216ENST00000527467 E5RI56 91 aa7.58□□□□□ -1.2
CTNND1-216ENST00000527467 AXIN1O15169 862 aa7.58□□□□□ -1.2
CTNND1-216ENST00000527467 ZNF862O60290 1169 aa7.58□□□□□ -1.2
CTNND1-216ENST00000527467 CAND2O75155 1236 aa7.58□□□□□ -1.2
CTNND1-216ENST00000527467 CNOT3O75175 753 aaKnown RBP7.58□□□□□ -1.2
CTNND1-216ENST00000527467 PSMC3P17980 439 aa7.58□□□□□ -1.2
CTNND1-216ENST00000527467 STAT5AP42229 794 aa7.58□□□□□ -1.2
CTNND1-216ENST00000527467 STAT5BP51692 787 aa7.58□□□□□ -1.2
CTNND1-216ENST00000527467 MRPS25P82663 173 aaKnown RBP7.58□□□□□ -1.2
CTNND1-216ENST00000527467 CHRNDQ07001 517 aa7.58□□□□□ -1.2
CTNND1-216ENST00000527467 SFSWAPQ12872 951 aaKnown RBP7.58□□□□□ -1.2
CTNND1-216ENST00000527467 ZNF57Q68EA5 555 aaPredicted RBP7.58□□□□□ -1.2
CTNND1-216ENST00000527467 ESRP1Q6NXG1 681 aaKnown RBP7.58□□□□□ -1.2
CTNND1-216ENST00000527467 SAMD7Q7Z3H4 446 aa7.58□□□□□ -1.2
CTNND1-216ENST00000527467 RHOT2Q8IXI1 618 aa7.58□□□□□ -1.2
CTNND1-216ENST00000527467 SLAIN1Q8ND83 568 aa7.58□□□□□ -1.2
CTNND1-216ENST00000527467 MOSPD2Q8NHP6 518 aa7.58□□□□□ -1.2
CTNND1-216ENST00000527467 CNDP1Q96KN2 507 aa7.58□□□□□ -1.2
CTNND1-216ENST00000527467 FOXP3Q9BZS1 431 aa7.58□□□□□ -1.2
CTNND1-216ENST00000527467 POLR1BQ9H9Y6 1135 aa7.58□□□□□ -1.2
CTNND1-216ENST00000527467 LRRC4Q9HBW1 653 aa7.58□□□□□ -1.2
CTNND1-216ENST00000527467 C8orf4Q9NR00 106 aa7.58□□□□□ -1.2
CTNND1-216ENST00000527467 MAD2L2Q9UI95 211 aa7.58□□□□□ -1.2
CTNND1-216ENST00000527467 PCDHB15Q9Y5E8 787 aa7.58□□□□□ -1.2
CTNND1-216ENST00000527467 MIF4GDA9UHW6 222 aaKnown RBP7.58□□□□□ -1.2
CTNND1-216ENST00000527467 SLC1A4P43007 532 aa7.58□□□□□ -1.2
CTNND1-216ENST00000527467 CENPAP49450 140 aa7.58□□□□□ -1.2
CTNND1-216ENST00000527467 SARSP49591 514 aaKnown RBP7.58□□□□□ -1.2
CTNND1-216ENST00000527467 NLRP11P59045 1033 aaKnown RBP7.58□□□□□ -1.2
CTNND1-216ENST00000527467 TFDP2Q14188 446 aa7.58□□□□□ -1.2
CTNND1-216ENST00000527467 ZSWIM7Q19AV6 140 aa7.58□□□□□ -1.2
CTNND1-216ENST00000527467 XKR9Q5GH70 373 aa7.58□□□□□ -1.2
CTNND1-216ENST00000527467 NSMFQ6X4W1 530 aa7.58□□□□□ -1.2
CTNND1-216ENST00000527467 SETD3Q86TU7 594 aaPredicted RBP7.58□□□□□ -1.2
CTNND1-216ENST00000527467 METTL13Q8N6R0 699 aa7.58□□□□□ -1.2
CTNND1-216ENST00000527467 SH3KBP1Q96B97 665 aa7.58□□□□□ -1.2
CTNND1-216ENST00000527467 CD209Q9NNX6 404 aa7.58□□□□□ -1.2
CTNND1-216ENST00000527467 HMG20AQ9NP66 347 aa7.58□□□□□ -1.2
CTNND1-216ENST00000527467 C20orf96Q9NUD7 363 aaPredicted RBP7.58□□□□□ -1.2
CTNND1-216ENST00000527467 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.58□□□□□ -1.2
CTNND1-216ENST00000527467 UBE2Q2LH0YL09 131 aa7.58□□□□□ -1.2
CTNND1-216ENST00000527467 BTN3A3O00478 584 aa7.58□□□□□ -1.2
CTNND1-216ENST00000527467 STK25O00506 426 aa7.58□□□□□ -1.2
CTNND1-216ENST00000527467 PRPF4O43172 522 aaKnown RBP eCLIP7.58□□□□□ -1.24e-8■□□□□ 10.4
CTNND1-216ENST00000527467 BCL10O95999 233 aa7.58□□□□□ -1.2
CTNND1-216ENST00000527467 SERPING1P05155 500 aa7.58□□□□□ -1.2
CTNND1-216ENST00000527467 ITGA1P56199 1179 aa7.58□□□□□ -1.2
CTNND1-216ENST00000527467 LLGL1Q15334 1064 aa7.58□□□□□ -1.2
CTNND1-216ENST00000527467 NFIL3Q16649 462 aa7.58□□□□□ -1.2
CTNND1-216ENST00000527467 MAN2A1Q16706 1144 aa7.58□□□□□ -1.2
CTNND1-216ENST00000527467 KCTD21Q4G0X4 260 aa7.58□□□□□ -1.2
CTNND1-216ENST00000527467 SUSD4Q5VX71 490 aa7.58□□□□□ -1.2
CTNND1-216ENST00000527467 OR6B2Q6IFH4 312 aa7.58□□□□□ -1.2
CTNND1-216ENST00000527467 METTL23Q86XA0 190 aa7.58□□□□□ -1.2
CTNND1-216ENST00000527467 SLFN12Q8IYM2 578 aa7.58□□□□□ -1.2
CTNND1-216ENST00000527467 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.58□□□□□ -1.2
CTNND1-216ENST00000527467 JARID2Q92833 1246 aaPredicted RBP7.58□□□□□ -1.2
CTNND1-216ENST00000527467 MIEF2Q96C03 454 aa7.58□□□□□ -1.2
CTNND1-216ENST00000527467 CDCA5Q96FF9 252 aa7.58□□□□□ -1.2
CTNND1-216ENST00000527467 ANKRD36BP1Q96IX9 119 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms