RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 BZW2Q9Y6E2 419 aaKnown RBP20.21■□□□□ 0.83
SMPD1-203ENST00000527275 N4BP1O75113 896 aaKnown RBP20.2■□□□□ 0.82
SMPD1-203ENST00000527275 ZNF623O75123 536 aa20.2■□□□□ 0.82
SMPD1-203ENST00000527275 PARNO95453 639 aaKnown RBP20.2■□□□□ 0.82
SMPD1-203ENST00000527275 C4BPAP04003 597 aaKnown RBP20.2■□□□□ 0.82
SMPD1-203ENST00000527275 JAM2P57087 298 aa20.2■□□□□ 0.82
SMPD1-203ENST00000527275 ZACNQ401N2 412 aa20.2■□□□□ 0.82
SMPD1-203ENST00000527275 JADE1Q6IE81 842 aa20.2■□□□□ 0.82
SMPD1-203ENST00000527275 ALKAL1Q6UXT8 129 aa20.2■□□□□ 0.82
SMPD1-203ENST00000527275 LRRN4CLQ8ND94 238 aa20.2■□□□□ 0.82
SMPD1-203ENST00000527275 MNS1Q8NEH6 495 aa20.2■□□□□ 0.82
SMPD1-203ENST00000527275 TAS1R2Q8TE23 839 aa20.2■□□□□ 0.82
SMPD1-203ENST00000527275 LINC01599Q8WXQ3 324 aa20.2■□□□□ 0.82
SMPD1-203ENST00000527275 SEPT8Q92599 483 aa20.2■□□□□ 0.82
SMPD1-203ENST00000527275 LPPQ93052 612 aa20.2■□□□□ 0.82
SMPD1-203ENST00000527275 SNX27Q96L92 541 aa20.2■□□□□ 0.82
SMPD1-203ENST00000527275 FTHL17Q9BXU8 183 aa20.2■□□□□ 0.82
SMPD1-203ENST00000527275 RGS18Q9NS28 235 aa20.2■□□□□ 0.82
SMPD1-203ENST00000527275 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.2■□□□□ 0.82
SMPD1-203ENST00000527275 V9GYY5 206 aaPredicted RBP20.2■□□□□ 0.82
SMPD1-203ENST00000527275 KIAA0355O15063 1070 aa20.19■□□□□ 0.82
SMPD1-203ENST00000527275 PMM2O15305 246 aa20.19■□□□□ 0.82
SMPD1-203ENST00000527275 P4HA2O15460 535 aa20.19■□□□□ 0.82
SMPD1-203ENST00000527275 TIMP1P01033 207 aa20.19■□□□□ 0.82
SMPD1-203ENST00000527275 CXCL10P02778 98 aa20.19■□□□□ 0.82
SMPD1-203ENST00000527275 CETN1Q12798 172 aa20.19■□□□□ 0.82
SMPD1-203ENST00000527275 DUOXA2Q1HG44 320 aa20.19■□□□□ 0.82
SMPD1-203ENST00000527275 TDRD10Q5VZ19 366 aaKnown RBP20.19■□□□□ 0.82
SMPD1-203ENST00000527275 ZMAT2Q96NC0 199 aaKnown RBP20.19■□□□□ 0.82
SMPD1-203ENST00000527275 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.19■□□□□ 0.82
SMPD1-203ENST00000527275 ATF7P17544 494 aaPredicted RBP20.19■□□□□ 0.82
SMPD1-203ENST00000527275 RAB27AP51159 221 aa20.19■□□□□ 0.82
SMPD1-203ENST00000527275 BIRC3Q13489 604 aa20.19■□□□□ 0.82
SMPD1-203ENST00000527275 TCTN1Q2MV58 587 aa20.19■□□□□ 0.82
SMPD1-203ENST00000527275 SCARA3Q6AZY7 606 aa20.19■□□□□ 0.82
SMPD1-203ENST00000527275 TXLNBQ8N3L3 684 aa20.19■□□□□ 0.82
SMPD1-203ENST00000527275 RNF169Q8NCN4 708 aa20.19■□□□□ 0.82
SMPD1-203ENST00000527275 LMO3Q8TAP4 145 aa20.19■□□□□ 0.82
SMPD1-203ENST00000527275 STK33Q9BYT3 514 aa20.19■□□□□ 0.82
SMPD1-203ENST00000527275 TSPYL2Q9H2G4 693 aaPredicted RBP20.19■□□□□ 0.82
SMPD1-203ENST00000527275 DNAJC12Q9UKB3 198 aa20.19■□□□□ 0.82
SMPD1-203ENST00000527275 COQ4Q9Y3A0 265 aa20.19■□□□□ 0.82
SMPD1-203ENST00000527275 C9IYK1 514 aa20.18■□□□□ 0.82
SMPD1-203ENST00000527275 RAG1P15918 1043 aa20.18■□□□□ 0.82
SMPD1-203ENST00000527275 TUBB2AQ13885 445 aa20.18■□□□□ 0.82
SMPD1-203ENST00000527275 SLC18A3Q16572 532 aa20.18■□□□□ 0.82
SMPD1-203ENST00000527275 EPC2Q52LR7 807 aa20.18■□□□□ 0.82
SMPD1-203ENST00000527275 GLRA4Q5JXX5 417 aa20.18■□□□□ 0.82
SMPD1-203ENST00000527275 SLC24A5Q71RS6 500 aa20.18■□□□□ 0.82
SMPD1-203ENST00000527275 MRPL10Q7Z7H8 261 aaKnown RBP20.18■□□□□ 0.82
SMPD1-203ENST00000527275 FBXL13Q8NEE6 735 aa20.18■□□□□ 0.82
SMPD1-203ENST00000527275 SEMA4DQ92854 862 aa20.18■□□□□ 0.82
SMPD1-203ENST00000527275 SECISBP2LQ93073 1101 aaKnown RBP20.18■□□□□ 0.82
SMPD1-203ENST00000527275 ABHD8Q96I13 439 aa20.18■□□□□ 0.82
SMPD1-203ENST00000527275 ZFP42Q96MM3 310 aa20.18■□□□□ 0.82
SMPD1-203ENST00000527275 TUBB2BQ9BVA1 445 aa20.18■□□□□ 0.82
SMPD1-203ENST00000527275 ADAMTS1Q9UHI8 967 aa20.18■□□□□ 0.82
SMPD1-203ENST00000527275 MACROD2A1Z1Q3 448 aa20.18■□□□□ 0.82
SMPD1-203ENST00000527275 PJA2O43164 708 aa20.18■□□□□ 0.82
SMPD1-203ENST00000527275 ITGA4P13612 1032 aa20.18■□□□□ 0.82
SMPD1-203ENST00000527275 PRKCIP41743 596 aa20.18■□□□□ 0.82
SMPD1-203ENST00000527275 STAT1P42224 750 aa20.18■□□□□ 0.82
SMPD1-203ENST00000527275 AP3M2P53677 418 aa20.18■□□□□ 0.82
SMPD1-203ENST00000527275 PTK2Q05397 1052 aa20.18■□□□□ 0.82
SMPD1-203ENST00000527275 AGMOQ6ZNB7 445 aa20.18■□□□□ 0.82
SMPD1-203ENST00000527275 CD302Q8IX05 232 aa20.18■□□□□ 0.82
SMPD1-203ENST00000527275 HACE1Q8IYU2 909 aa20.18■□□□□ 0.82
SMPD1-203ENST00000527275 TMEM130Q8N3G9 435 aa20.18■□□□□ 0.82
SMPD1-203ENST00000527275 ANKRD7Q92527 254 aa20.18■□□□□ 0.82
SMPD1-203ENST00000527275 VWCEQ96DN2 955 aa20.18■□□□□ 0.82
SMPD1-203ENST00000527275 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.18■□□□□ 0.82
SMPD1-203ENST00000527275 CNTN3Q9P232 1028 aa20.18■□□□□ 0.82
SMPD1-203ENST00000527275 APEX2Q9UBZ4 518 aa20.18■□□□□ 0.82
SMPD1-203ENST00000527275 CDC23Q9UJX2 597 aa20.18■□□□□ 0.82
SMPD1-203ENST00000527275 C2CD2Q9Y426 696 aa20.18■□□□□ 0.82
SMPD1-203ENST00000527275 A0A087X0T9 212 aa20.17■□□□□ 0.82
SMPD1-203ENST00000527275 TMEM191BP0C7N4 346 aa20.17■□□□□ 0.82
SMPD1-203ENST00000527275 FAM228BP0C875 321 aa20.17■□□□□ 0.82
SMPD1-203ENST00000527275 TMEM132DQ14C87 1099 aa20.17■□□□□ 0.82
SMPD1-203ENST00000527275 TRAPPC11Q7Z392 1133 aa20.17■□□□□ 0.82
SMPD1-203ENST00000527275 ZNF571Q7Z3V5 609 aaPredicted RBP20.17■□□□□ 0.82
SMPD1-203ENST00000527275 ECHDC2Q86YB7 292 aa20.17■□□□□ 0.82
SMPD1-203ENST00000527275 APBB2Q92870 758 aa20.17■□□□□ 0.82
SMPD1-203ENST00000527275 KIF12Q96FN5 646 aa20.17■□□□□ 0.82
SMPD1-203ENST00000527275 LUC7LQ9NQ29 371 aaKnown RBP20.17■□□□□ 0.82
SMPD1-203ENST00000527275 RAB20Q9NX57 234 aa20.17■□□□□ 0.82
SMPD1-203ENST00000527275 DAAM1Q9Y4D1 1078 aa20.17■□□□□ 0.82
SMPD1-203ENST00000527275 SMIM28A0A1B0GU29 152 aa20.17■□□□□ 0.82
SMPD1-203ENST00000527275 ENPP3O14638 875 aa20.17■□□□□ 0.82
SMPD1-203ENST00000527275 VNN1O95497 513 aa20.17■□□□□ 0.82
SMPD1-203ENST00000527275 CSF2RAP15509 400 aa20.17■□□□□ 0.82
SMPD1-203ENST00000527275 FERP16591 822 aa20.17■□□□□ 0.82
SMPD1-203ENST00000527275 MLH1P40692 756 aa20.17■□□□□ 0.82
SMPD1-203ENST00000527275 AFF1P51825 1210 aaKnown RBP20.17■□□□□ 0.82
SMPD1-203ENST00000527275 ELMO3Q96BJ8 720 aa20.17■□□□□ 0.82
SMPD1-203ENST00000527275 ANKRD36BP1Q96IX9 119 aa20.17■□□□□ 0.82
SMPD1-203ENST00000527275 GAD1Q99259 594 aa20.17■□□□□ 0.82
SMPD1-203ENST00000527275 ALPK3Q96L96 1907 aa20.16■□□□□ 0.82
SMPD1-203ENST00000527275 LAMA2P24043 3122 aaKnown RBP20.16■□□□□ 0.82
SMPD1-203ENST00000527275 PHACTR2O75167 634 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms