RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 PODXLO00592 558 aa11.64□□□□□ -0.55
NEDD8-205ENST00000527046 FSCN2O14926 492 aa11.64□□□□□ -0.55
NEDD8-205ENST00000527046 ITGB3P05106 788 aa11.64□□□□□ -0.55
NEDD8-205ENST00000527046 CCDC192P0DO97 292 aa11.64□□□□□ -0.55
NEDD8-205ENST00000527046 POU3F3P20264 500 aaPredicted RBP11.64□□□□□ -0.55
NEDD8-205ENST00000527046 IRS1P35568 1242 aa11.64□□□□□ -0.55
NEDD8-205ENST00000527046 GCLMP48507 274 aa11.64□□□□□ -0.55
NEDD8-205ENST00000527046 ALDH7A1P49419 539 aaKnown RBP11.64□□□□□ -0.55
NEDD8-205ENST00000527046 LILRA4P59901 499 aa11.64□□□□□ -0.55
NEDD8-205ENST00000527046 ZNF445P59923 1031 aa11.64□□□□□ -0.55
NEDD8-205ENST00000527046 DUOXA2Q1HG44 320 aa11.64□□□□□ -0.55
NEDD8-205ENST00000527046 HSP90AA4PQ58FG1 418 aa11.64□□□□□ -0.55
NEDD8-205ENST00000527046 MIIPQ5JXC2 388 aa11.64□□□□□ -0.55
NEDD8-205ENST00000527046 KIAA0319Q5VV43 1072 aa11.64□□□□□ -0.55
NEDD8-205ENST00000527046 INTS8Q75QN2 995 aaKnown RBP11.64□□□□□ -0.55
NEDD8-205ENST00000527046 DDX53Q86TM3 631 aaKnown RBP11.64□□□□□ -0.55
NEDD8-205ENST00000527046 GAS2L3Q86XJ1 694 aa11.64□□□□□ -0.55
NEDD8-205ENST00000527046 HASPINQ8TF76 798 aa11.64□□□□□ -0.55
NEDD8-205ENST00000527046 DDX27Q96GQ7 796 aaKnown RBP11.64□□□□□ -0.55
NEDD8-205ENST00000527046 B3GALT6Q96L58 329 aa11.64□□□□□ -0.55
NEDD8-205ENST00000527046 UROC1Q96N76 676 aa11.64□□□□□ -0.55
NEDD8-205ENST00000527046 SAMD11Q96NU1 681 aa11.64□□□□□ -0.55
NEDD8-205ENST00000527046 FAM193BQ96PV7 902 aaPredicted RBP11.64□□□□□ -0.55
NEDD8-205ENST00000527046 COLEC11Q9BWP8 271 aa11.64□□□□□ -0.55
NEDD8-205ENST00000527046 THAP9Q9H5L6 903 aa11.64□□□□□ -0.55
NEDD8-205ENST00000527046 CBX8Q9HC52 389 aa11.64□□□□□ -0.55
NEDD8-205ENST00000527046 CHST7Q9NS84 486 aa11.64□□□□□ -0.55
NEDD8-205ENST00000527046 ARMCX3Q9UH62 379 aaPredicted RBP11.64□□□□□ -0.55
NEDD8-205ENST00000527046 ADAM28Q9UKQ2 775 aa11.64□□□□□ -0.55
NEDD8-205ENST00000527046 COQ4Q9Y3A0 265 aa11.64□□□□□ -0.55
NEDD8-205ENST00000527046 PCDHGC5Q9Y5F6 944 aa11.64□□□□□ -0.55
NEDD8-205ENST00000527046 MYO9BQ13459 2157 aa11.64□□□□□ -0.55
NEDD8-205ENST00000527046 MYO7AQ13402 2215 aa11.63□□□□□ -0.55
NEDD8-205ENST00000527046 COL4A4P53420 1690 aaPredicted RBP11.63□□□□□ -0.55
NEDD8-205ENST00000527046 M0QZQ0 153 aa11.63□□□□□ -0.55
NEDD8-205ENST00000527046 TBC1D4O60343 1298 aa11.63□□□□□ -0.55
NEDD8-205ENST00000527046 B3GAT3O94766 335 aa11.63□□□□□ -0.55
NEDD8-205ENST00000527046 EPB41P11171 864 aaKnown RBP11.63□□□□□ -0.55
NEDD8-205ENST00000527046 TNNI1P19237 187 aa11.63□□□□□ -0.55
NEDD8-205ENST00000527046 FGFR3P22607 806 aa11.63□□□□□ -0.55
NEDD8-205ENST00000527046 POLR2BP30876 1174 aaKnown RBP11.63□□□□□ -0.55
NEDD8-205ENST00000527046 CTNNB1P35222 781 aa11.63□□□□□ -0.55
NEDD8-205ENST00000527046 ZNF165P49910 485 aa11.63□□□□□ -0.55
NEDD8-205ENST00000527046 GPM6BQ13491 265 aa11.63□□□□□ -0.55
NEDD8-205ENST00000527046 MRPL58Q14197 206 aaKnown RBP11.63□□□□□ -0.55
NEDD8-205ENST00000527046 LRSAM1Q6UWE0 723 aa11.63□□□□□ -0.55
NEDD8-205ENST00000527046 FBXO22Q8NEZ5 403 aa11.63□□□□□ -0.55
NEDD8-205ENST00000527046 BEST2Q8NFU1 509 aa11.63□□□□□ -0.55
NEDD8-205ENST00000527046 TAS1R2Q8TE23 839 aa11.63□□□□□ -0.55
NEDD8-205ENST00000527046 CACTINQ8WUQ7 758 aaKnown RBP11.63□□□□□ -0.55
NEDD8-205ENST00000527046 GUCD1Q96NT3 240 aa11.63□□□□□ -0.55
NEDD8-205ENST00000527046 PRDM12Q9H4Q4 367 aa11.63□□□□□ -0.55
NEDD8-205ENST00000527046 METTL14Q9HCE5 456 aaKnown RBP11.63□□□□□ -0.55
NEDD8-205ENST00000527046 DACH1Q9UI36 760 aa11.63□□□□□ -0.55
NEDD8-205ENST00000527046 AGAP1Q9UPQ3 857 aa11.63□□□□□ -0.55
NEDD8-205ENST00000527046 LZTS1Q9Y250 596 aa11.63□□□□□ -0.55
NEDD8-205ENST00000527046 NME7Q9Y5B8 376 aa11.63□□□□□ -0.55
NEDD8-205ENST00000527046 PCDHB12Q9Y5F1 795 aa11.63□□□□□ -0.55
NEDD8-205ENST00000527046 PMM2O15305 246 aa11.62□□□□□ -0.55
NEDD8-205ENST00000527046 STAU1O95793 577 aaKnown RBP11.62□□□□□ -0.55
NEDD8-205ENST00000527046 GNA14O95837 355 aa11.62□□□□□ -0.55
NEDD8-205ENST00000527046 ATP1A3P13637 1013 aa11.62□□□□□ -0.55
NEDD8-205ENST00000527046 GTF2H1P32780 548 aa11.62□□□□□ -0.55
NEDD8-205ENST00000527046 MYL6P60660 151 aa11.62□□□□□ -0.55
NEDD8-205ENST00000527046 MYL5Q02045 173 aa11.62□□□□□ -0.55
NEDD8-205ENST00000527046 KCNH2Q12809 1159 aa11.62□□□□□ -0.55
NEDD8-205ENST00000527046 TCP11X2Q5H9J9 407 aa11.62□□□□□ -0.55
NEDD8-205ENST00000527046 RTP2Q5QGT7 225 aa11.62□□□□□ -0.55
NEDD8-205ENST00000527046 SPOUT1Q5T280 376 aaKnown RBP11.62□□□□□ -0.55
NEDD8-205ENST00000527046 FUT10Q6P4F1 479 aa11.62□□□□□ -0.55
NEDD8-205ENST00000527046 RSPO2Q6UXX9 243 aaPredicted RBP11.62□□□□□ -0.55
NEDD8-205ENST00000527046 AOPEPQ8N6M6 819 aa11.62□□□□□ -0.55
NEDD8-205ENST00000527046 GDPD5Q8WTR4 605 aa11.62□□□□□ -0.55
NEDD8-205ENST00000527046 POF1BQ8WVV4 589 aa11.62□□□□□ -0.55
NEDD8-205ENST00000527046 SUSD3Q96L08 255 aa11.62□□□□□ -0.55
NEDD8-205ENST00000527046 CNOT6LQ96LI5 555 aaKnown RBP11.62□□□□□ -0.55
NEDD8-205ENST00000527046 FAM161BQ96MY7 647 aa11.62□□□□□ -0.55
NEDD8-205ENST00000527046 FNBP1Q96RU3 617 aa11.62□□□□□ -0.55
NEDD8-205ENST00000527046 ZBP1Q9H171 429 aa11.62□□□□□ -0.55
NEDD8-205ENST00000527046 VRTNQ9H8Y1 702 aa11.62□□□□□ -0.55
NEDD8-205ENST00000527046 APOBEC3GQ9HC16 384 aaKnown RBP11.62□□□□□ -0.55
NEDD8-205ENST00000527046 TMEM8AQ9HCN3 771 aa11.62□□□□□ -0.55
NEDD8-205ENST00000527046 AAASQ9NRG9 546 aa11.62□□□□□ -0.55
NEDD8-205ENST00000527046 MTMR10Q9NXD2 777 aa11.62□□□□□ -0.55
NEDD8-205ENST00000527046 ITGA11Q9UKX5 1188 aa11.62□□□□□ -0.55
NEDD8-205ENST00000527046 RWDD3Q9Y3V2 267 aa11.62□□□□□ -0.55
NEDD8-205ENST00000527046 HIDE1A8MVS5 230 aa11.61□□□□□ -0.55
NEDD8-205ENST00000527046 KCNJ18B7U540 433 aa11.61□□□□□ -0.55
NEDD8-205ENST00000527046 TADA2AO75478 443 aa11.61□□□□□ -0.55
NEDD8-205ENST00000527046 ASS1P00966 412 aaKnown RBP11.61□□□□□ -0.55
NEDD8-205ENST00000527046 HLA-DRAP01903 254 aa11.61□□□□□ -0.55
NEDD8-205ENST00000527046 SOD2P04179 222 aa11.61□□□□□ -0.55
NEDD8-205ENST00000527046 TMEM191BP0C7N4 346 aa11.61□□□□□ -0.55
NEDD8-205ENST00000527046 KRT13P13646 458 aa11.61□□□□□ -0.55
NEDD8-205ENST00000527046 FMO5P49326 533 aa11.61□□□□□ -0.55
NEDD8-205ENST00000527046 AP3M2P53677 418 aa11.61□□□□□ -0.55
NEDD8-205ENST00000527046 RBP5P82980 135 aa11.61□□□□□ -0.55
NEDD8-205ENST00000527046 UBE3AQ05086 875 aa11.61□□□□□ -0.55
NEDD8-205ENST00000527046 KCNMA1Q12791 1236 aa11.61□□□□□ -0.55
NEDD8-205ENST00000527046 KCNJ12Q14500 433 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms