RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 R3HDM1Q15032 1099 aaKnown RBP5.46□□□□□ -1.54
USP48-211ENST00000526044 SUSD4Q5VX71 490 aa5.46□□□□□ -1.54
USP48-211ENST00000526044 IQSEC1Q6DN90 963 aa5.46□□□□□ -1.54
USP48-211ENST00000526044 TCTN3Q6NUS6 607 aa5.46□□□□□ -1.54
USP48-211ENST00000526044 CHST13Q8NET6 341 aa5.46□□□□□ -1.54
USP48-211ENST00000526044 DNERQ8NFT8 737 aa5.46□□□□□ -1.54
USP48-211ENST00000526044 EXOC6Q8TAG9 804 aa5.46□□□□□ -1.54
USP48-211ENST00000526044 CFHR4Q92496 578 aa5.46□□□□□ -1.54
USP48-211ENST00000526044 DPYSL5Q9BPU6 564 aa5.46□□□□□ -1.54
USP48-211ENST00000526044 UTP14AQ9BVJ6 771 aaKnown RBP5.46□□□□□ -1.54
USP48-211ENST00000526044 NYXQ9GZU5 481 aa5.46□□□□□ -1.54
USP48-211ENST00000526044 USP44Q9H0E7 712 aa5.46□□□□□ -1.54
USP48-211ENST00000526044 SLC6A15Q9H2J7 730 aa5.46□□□□□ -1.54
USP48-211ENST00000526044 TOPORSQ9NS56 1045 aaPredicted RBP5.46□□□□□ -1.54
USP48-211ENST00000526044 SMPD4Q9NXE4 827 aa5.46□□□□□ -1.54
USP48-211ENST00000526044 TRMT112Q9UI30 125 aaKnown RBP5.46□□□□□ -1.54
USP48-211ENST00000526044 USP18Q9UMW8 372 aa5.46□□□□□ -1.54
USP48-211ENST00000526044 RBM8AQ9Y5S9 174 aaKnown RBP5.46□□□□□ -1.54
USP48-211ENST00000526044 QSER1Q2KHR3 1735 aa5.45□□□□□ -1.54
USP48-211ENST00000526044 A0A0A6YYK5 440 aaPredicted RBP5.45□□□□□ -1.54
USP48-211ENST00000526044 ANKRD62A6NC57 917 aa5.45□□□□□ -1.54
USP48-211ENST00000526044 PATE3B3GLJ2 98 aa5.45□□□□□ -1.54
USP48-211ENST00000526044 GPR39O43194 453 aa5.45□□□□□ -1.54
USP48-211ENST00000526044 SLC26A4O43511 780 aa5.45□□□□□ -1.54
USP48-211ENST00000526044 FSBPO95073 299 aa5.45□□□□□ -1.54
USP48-211ENST00000526044 GNAI2P04899 355 aa5.45□□□□□ -1.54
USP48-211ENST00000526044 SERPINB2P05120 415 aa5.45□□□□□ -1.54
USP48-211ENST00000526044 PCCAP05165 728 aaPredicted RBP5.45□□□□□ -1.54
USP48-211ENST00000526044 NBPF7P0C2Y1 421 aaPredicted RBP5.45□□□□□ -1.54
USP48-211ENST00000526044 UBTFL1P0CB47 393 aaPredicted RBP5.45□□□□□ -1.54
USP48-211ENST00000526044 POU3F3P20264 500 aaPredicted RBP5.45□□□□□ -1.54
USP48-211ENST00000526044 XPAP23025 273 aaPredicted RBP5.45□□□□□ -1.54
USP48-211ENST00000526044 RPS19P39019 145 aaKnown RBP5.45□□□□□ -1.54
USP48-211ENST00000526044 TMPRSS15P98073 1019 aa5.45□□□□□ -1.54
USP48-211ENST00000526044 PDCD1Q15116 288 aa5.45□□□□□ -1.54
USP48-211ENST00000526044 CCDC178Q5BJE1 867 aa5.45□□□□□ -1.54
USP48-211ENST00000526044 SLC10A5Q5PT55 438 aa5.45□□□□□ -1.54
USP48-211ENST00000526044 RNF219Q5W0B1 726 aaPredicted RBP5.45□□□□□ -1.54
USP48-211ENST00000526044 ZNF662Q6ZS27 426 aa5.45□□□□□ -1.54
USP48-211ENST00000526044 CLEC14AQ86T13 490 aa5.45□□□□□ -1.54
USP48-211ENST00000526044 NBPF5PQ86XG9 351 aaPredicted RBP5.45□□□□□ -1.54
USP48-211ENST00000526044 PLA2G15Q8NCC3 412 aa5.45□□□□□ -1.54
USP48-211ENST00000526044 GAB3Q8WWW8 586 aa5.45□□□□□ -1.54
USP48-211ENST00000526044 RABGGTAQ92696 567 aa5.45□□□□□ -1.54
USP48-211ENST00000526044 FAM89AQ96GI7 184 aa5.45□□□□□ -1.54
USP48-211ENST00000526044 ACAP3Q96P50 834 aa5.45□□□□□ -1.54
USP48-211ENST00000526044 SOX7Q9BT81 388 aa5.45□□□□□ -1.54
USP48-211ENST00000526044 NELFAQ9H3P2 528 aa5.45□□□□□ -1.54
USP48-211ENST00000526044 ZBTB40Q9NUA8 1239 aa5.45□□□□□ -1.54
USP48-211ENST00000526044 MCM8Q9UJA3 840 aa5.45□□□□□ -1.54
USP48-211ENST00000526044 ZFR2Q9UPR6 939 aaKnown RBP5.45□□□□□ -1.54
USP48-211ENST00000526044 PPP2R3BQ9Y5P8 575 aa5.45□□□□□ -1.54
USP48-211ENST00000526044 TUBGCP6Q96RT7 1819 aa5.45□□□□□ -1.54
USP48-211ENST00000526044 ATP10DQ9P241 1426 aa5.45□□□□□ -1.54
USP48-211ENST00000526044 C4AP0C0L4 1744 aa5.45□□□□□ -1.54
USP48-211ENST00000526044 UTYO14607 1347 aa5.45□□□□□ -1.54
USP48-211ENST00000526044 UBN2Q6ZU65 1347 aa5.45□□□□□ -1.54
USP48-211ENST00000526044 SH3TC1Q8TE82 1336 aa5.45□□□□□ -1.54
USP48-211ENST00000526044 ANKRD36CQ5JPF3 1778 aa5.44□□□□□ -1.54
USP48-211ENST00000526044 GOLGA8BA8MQT2 603 aa5.44□□□□□ -1.54
USP48-211ENST00000526044 FOXS1O43638 330 aa5.44□□□□□ -1.54
USP48-211ENST00000526044 NRP2O60462 931 aa5.44□□□□□ -1.54
USP48-211ENST00000526044 ZNF623O75123 536 aa5.44□□□□□ -1.54
USP48-211ENST00000526044 FSHBP01225 129 aa5.44□□□□□ -1.54
USP48-211ENST00000526044 MMP10P09238 476 aa5.44□□□□□ -1.54
USP48-211ENST00000526044 CLEC2LP0C7M8 214 aa5.44□□□□□ -1.54
USP48-211ENST00000526044 HNRNPLP14866 589 aaKnown RBP eCLIP5.44□□□□□ -1.54
USP48-211ENST00000526044 TNFRSF1AP19438 455 aa5.44□□□□□ -1.54
USP48-211ENST00000526044 BPIFB4P59827 614 aa5.44□□□□□ -1.54
USP48-211ENST00000526044 ADAM17P78536 824 aa5.44□□□□□ -1.54
USP48-211ENST00000526044 ATP8B2P98198 1209 aa5.44□□□□□ -1.54
USP48-211ENST00000526044 ICAM4Q14773 271 aa5.44□□□□□ -1.54
USP48-211ENST00000526044 CCDC62Q6P9F0 684 aa5.44□□□□□ -1.54
USP48-211ENST00000526044 LHFPL2Q6ZUX7 228 aa5.44□□□□□ -1.54
USP48-211ENST00000526044 UBE3BQ7Z3V4 1068 aa5.44□□□□□ -1.54
USP48-211ENST00000526044 SPATS2Q86XZ4 545 aaKnown RBP5.44□□□□□ -1.54
USP48-211ENST00000526044 RPAP2Q8IXW5 612 aaPredicted RBP5.44□□□□□ -1.54
USP48-211ENST00000526044 SYNE4Q8N205 404 aa5.44□□□□□ -1.54
USP48-211ENST00000526044 SHCBP1Q8NEM2 672 aa5.44□□□□□ -1.54
USP48-211ENST00000526044 PPP1R14CQ8TAE6 165 aa5.44□□□□□ -1.54
USP48-211ENST00000526044 PSMD1Q99460 953 aa5.44□□□□□ -1.54
USP48-211ENST00000526044 MEIS3Q99687 375 aa5.44□□□□□ -1.54
USP48-211ENST00000526044 PLA2G12BQ9BX93 195 aa5.44□□□□□ -1.54
USP48-211ENST00000526044 DEF6Q9H4E7 631 aa5.44□□□□□ -1.54
USP48-211ENST00000526044 PRSS50Q9UI38 385 aa5.44□□□□□ -1.54
USP48-211ENST00000526044 ST6GALNAC2Q9UJ37 374 aa5.44□□□□□ -1.54
USP48-211ENST00000526044 TMPRSS11EQ9UL52 423 aa5.44□□□□□ -1.54
USP48-211ENST00000526044 BCORQ6W2J9 1755 aa5.44□□□□□ -1.54
USP48-211ENST00000526044 PXDNLA1KZ92 1463 aa5.44□□□□□ -1.54
USP48-211ENST00000526044 IBTKQ9P2D0 1353 aaPredicted RBP5.43□□□□□ -1.54
USP48-211ENST00000526044 GOLGA8AA7E2F4 631 aa5.43□□□□□ -1.54
USP48-211ENST00000526044 OVOL3O00110 214 aa5.43□□□□□ -1.54
USP48-211ENST00000526044 POLRMTO00411 1230 aaKnown RBP5.43□□□□□ -1.54
USP48-211ENST00000526044 RAD17O75943 681 aa5.43□□□□□ -1.54
USP48-211ENST00000526044 NTSR2O95665 410 aa5.43□□□□□ -1.54
USP48-211ENST00000526044 HMGA2P52926 109 aa5.43□□□□□ -1.54
USP48-211ENST00000526044 NRG3P56975 720 aa5.43□□□□□ -1.54
USP48-211ENST00000526044 DDR1Q08345 913 aa5.43□□□□□ -1.54
USP48-211ENST00000526044 FSCN1Q16658 493 aaKnown RBP5.43□□□□□ -1.54
USP48-211ENST00000526044 UGT8Q16880 541 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms