RNA–Protein interactions for RNA: ENST00000525990.1

SSBP3-210, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-210ENST00000525990 ZSWIM2Q8NEG5 633 aa13.13□□□□□ -0.31
SSBP3-210ENST00000525990 FGF13Q92913 245 aa13.13□□□□□ -0.31
SSBP3-210ENST00000525990 KCNN1Q92952 543 aa13.13□□□□□ -0.31
SSBP3-210ENST00000525990 FAM212AQ96EL1 285 aa13.13□□□□□ -0.31
SSBP3-210ENST00000525990 INTS4Q96HW7 963 aaKnown RBP13.13□□□□□ -0.31
SSBP3-210ENST00000525990 FGFBP2Q9BYJ0 223 aa13.13□□□□□ -0.31
SSBP3-210ENST00000525990 MFSD1Q9H3U5 465 aa13.13□□□□□ -0.31
SSBP3-210ENST00000525990 TBC1D7Q9P0N9 293 aa13.13□□□□□ -0.31
SSBP3-210ENST00000525990 FBXL5Q9UKA1 691 aa13.13□□□□□ -0.31
SSBP3-210ENST00000525990 FBXL21Q9UKT6 434 aa13.13□□□□□ -0.31
SSBP3-210ENST00000525990 PATJQ8NI35 1801 aa13.13□□□□□ -0.31
SSBP3-210ENST00000525990 A0A0B4J269 797 aa13.12□□□□□ -0.31
SSBP3-210ENST00000525990 ANHXE9PGG2 379 aa13.12□□□□□ -0.31
SSBP3-210ENST00000525990 H0YCG3 227 aa13.12□□□□□ -0.31
SSBP3-210ENST00000525990 SYN3O14994 580 aa13.12□□□□□ -0.31
SSBP3-210ENST00000525990 STX6O43752 255 aa13.12□□□□□ -0.31
SSBP3-210ENST00000525990 ABLIM3O94929 683 aa13.12□□□□□ -0.31
SSBP3-210ENST00000525990 VNN2O95498 520 aa13.12□□□□□ -0.31
SSBP3-210ENST00000525990 OR4Q2P0C623 313 aa13.12□□□□□ -0.31
SSBP3-210ENST00000525990 HOXA9P31269 272 aa13.12□□□□□ -0.31
SSBP3-210ENST00000525990 ACOT2P49753 483 aa13.12□□□□□ -0.31
SSBP3-210ENST00000525990 PTPN5P54829 565 aa13.12□□□□□ -0.31
SSBP3-210ENST00000525990 PPP2R3AQ06190 1150 aa13.12□□□□□ -0.31
SSBP3-210ENST00000525990 CTXN3Q4LDR2 81 aa13.12□□□□□ -0.31
SSBP3-210ENST00000525990 ASTLQ6HA08 431 aaPredicted RBP13.12□□□□□ -0.31
SSBP3-210ENST00000525990 JADE1Q6IE81 842 aa13.12□□□□□ -0.31
SSBP3-210ENST00000525990 GPR152Q8TDT2 470 aa13.12□□□□□ -0.31
SSBP3-210ENST00000525990 DDX12PQ92771 950 aa13.12□□□□□ -0.31
SSBP3-210ENST00000525990 DNAJC19Q96DA6 116 aa13.12□□□□□ -0.31
SSBP3-210ENST00000525990 FAM84AQ96KN4 292 aa13.12□□□□□ -0.31
SSBP3-210ENST00000525990 KXD1Q9BQD3 176 aa13.12□□□□□ -0.31
SSBP3-210ENST00000525990 MSTO1Q9BUK6 570 aa13.12□□□□□ -0.31
SSBP3-210ENST00000525990 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.12□□□□□ -0.311e-7■■■□□ 18
SSBP3-210ENST00000525990 CPSF3Q9UKF6 684 aaKnown RBP13.12□□□□□ -0.31
SSBP3-210ENST00000525990 CDH7Q9ULB5 785 aa13.12□□□□□ -0.31
SSBP3-210ENST00000525990 OBSL1O75147 1896 aa13.12□□□□□ -0.31
SSBP3-210ENST00000525990 KIF26AQ9ULI4 1882 aaPredicted RBP13.11□□□□□ -0.31
SSBP3-210ENST00000525990 SPTLC1O15269 473 aa13.11□□□□□ -0.31
SSBP3-210ENST00000525990 XYLBO75191 536 aa13.11□□□□□ -0.31
SSBP3-210ENST00000525990 PPP1R37O75864 691 aa13.11□□□□□ -0.31
SSBP3-210ENST00000525990 RHOP08100 348 aa13.11□□□□□ -0.31
SSBP3-210ENST00000525990 LRPAP1P30533 357 aa13.11□□□□□ -0.31
SSBP3-210ENST00000525990 CCR2P41597 374 aa13.11□□□□□ -0.31
SSBP3-210ENST00000525990 CASP5P51878 434 aa13.11□□□□□ -0.31
SSBP3-210ENST00000525990 WNT7BP56706 349 aa13.11□□□□□ -0.31
SSBP3-210ENST00000525990 SLC39A14Q15043 492 aa13.11□□□□□ -0.31
SSBP3-210ENST00000525990 PABPC1LQ4VXU2 614 aaKnown RBP13.11□□□□□ -0.31
SSBP3-210ENST00000525990 RRAGBQ5VZM2 374 aa13.11□□□□□ -0.31
SSBP3-210ENST00000525990 SCARA3Q6AZY7 606 aa13.11□□□□□ -0.31
SSBP3-210ENST00000525990 RNF19BQ6ZMZ0 732 aa13.11□□□□□ -0.31
SSBP3-210ENST00000525990 NPAS3Q8IXF0 933 aa13.11□□□□□ -0.31
SSBP3-210ENST00000525990 PDILTQ8N807 584 aa13.11□□□□□ -0.31
SSBP3-210ENST00000525990 ZNF461Q8TAF7 563 aa13.11□□□□□ -0.31
SSBP3-210ENST00000525990 TCEAL4Q96EI5 215 aa13.11□□□□□ -0.31
SSBP3-210ENST00000525990 TMEM209Q96SK2 561 aa13.11□□□□□ -0.31
SSBP3-210ENST00000525990 RPF1Q9H9Y2 349 aaKnown RBP13.11□□□□□ -0.31
SSBP3-210ENST00000525990 PLEKHA5Q9HAU0 1116 aa13.11□□□□□ -0.31
SSBP3-210ENST00000525990 CYP4F11Q9HBI6 524 aa13.11□□□□□ -0.31
SSBP3-210ENST00000525990 TFIP11Q9UBB9 837 aaKnown RBP13.11□□□□□ -0.31
SSBP3-210ENST00000525990 STK17AQ9UEE5 414 aa13.11□□□□□ -0.31
SSBP3-210ENST00000525990 KCNG1Q9UIX4 513 aa13.11□□□□□ -0.31
SSBP3-210ENST00000525990 UBQLN1Q9UMX0 589 aaKnown RBP13.11□□□□□ -0.31
SSBP3-210ENST00000525990 PCDHB8Q9UN66 801 aa13.11□□□□□ -0.31
SSBP3-210ENST00000525990 DENND4CQ5VZ89 1909 aa13.11□□□□□ -0.31
SSBP3-210ENST00000525990 M0QZQ0 153 aa13.1□□□□□ -0.31
SSBP3-210ENST00000525990 PRRG1O14668 218 aa13.1□□□□□ -0.31
SSBP3-210ENST00000525990 GALR2O43603 387 aaPredicted RBP13.1□□□□□ -0.31
SSBP3-210ENST00000525990 ADRB2P07550 413 aa13.1□□□□□ -0.31
SSBP3-210ENST00000525990 SRFP11831 508 aa13.1□□□□□ -0.31
SSBP3-210ENST00000525990 ATF2P15336 505 aa13.1□□□□□ -0.31
SSBP3-210ENST00000525990 CEBPBP17676 345 aa13.1□□□□□ -0.31
SSBP3-210ENST00000525990 ADSSP30520 456 aa13.1□□□□□ -0.31
SSBP3-210ENST00000525990 AARSP49588 968 aaKnown RBP eCLIP13.1□□□□□ -0.314e-6■■■■■ 36.2
SSBP3-210ENST00000525990 UVSSAQ2YD98 709 aa13.1□□□□□ -0.31
SSBP3-210ENST00000525990 FOXD4L6Q3SYB3 417 aaPredicted RBP13.1□□□□□ -0.31
SSBP3-210ENST00000525990 ZNF280DQ6N043 979 aa13.1□□□□□ -0.31
SSBP3-210ENST00000525990 CRELD2Q6UXH1 353 aaPredicted RBP13.1□□□□□ -0.31
SSBP3-210ENST00000525990 FOXD4L3Q6VB84 417 aaPredicted RBP13.1□□□□□ -0.31
SSBP3-210ENST00000525990 ZNF720Q7Z2F6 126 aa13.1□□□□□ -0.31
SSBP3-210ENST00000525990 HS6ST3Q8IZP7 471 aa13.1□□□□□ -0.31
SSBP3-210ENST00000525990 KRI1Q8N9T8 703 aaKnown RBP13.1□□□□□ -0.31
SSBP3-210ENST00000525990 GLIS3Q8NEA6 775 aa13.1□□□□□ -0.31
SSBP3-210ENST00000525990 MCRS1Q96EZ8 462 aa13.1□□□□□ -0.31
SSBP3-210ENST00000525990 PGLYRP2Q96PD5 576 aa13.1□□□□□ -0.31
SSBP3-210ENST00000525990 STRA6Q9BX79 667 aa13.1□□□□□ -0.31
SSBP3-210ENST00000525990 CRISPLD1Q9H336 500 aa13.1□□□□□ -0.31
SSBP3-210ENST00000525990 DAXXQ9UER7 740 aaPredicted RBP13.1□□□□□ -0.31
SSBP3-210ENST00000525990 CCDC39Q9UFE4 941 aa13.1□□□□□ -0.31
SSBP3-210ENST00000525990 INSL5Q9Y5Q6 135 aa13.1□□□□□ -0.31
SSBP3-210ENST00000525990 NUP210Q8TEM1 1887 aaPredicted RBP13.1□□□□□ -0.31
SSBP3-210ENST00000525990 ARHGEF37A1IGU5 675 aa13.09□□□□□ -0.31
SSBP3-210ENST00000525990 H7C4K7 107 aa13.09□□□□□ -0.31
SSBP3-210ENST00000525990 LRG1P02750 347 aa13.09□□□□□ -0.31
SSBP3-210ENST00000525990 CPB1P15086 417 aa13.09□□□□□ -0.31
SSBP3-210ENST00000525990 AOC1P19801 751 aa13.09□□□□□ -0.31
SSBP3-210ENST00000525990 NASPP49321 788 aaPredicted RBP13.09□□□□□ -0.31
SSBP3-210ENST00000525990 GPC5P78333 572 aa13.09□□□□□ -0.31
SSBP3-210ENST00000525990 ADCY1Q08828 1119 aa13.09□□□□□ -0.31
SSBP3-210ENST00000525990 PKP1Q13835 747 aa13.09□□□□□ -0.31
SSBP3-210ENST00000525990 SPATA1Q5VX52 437 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms