RNA–Protein interactions for RNA: ENST00000525375.1

GPATCH4-212, Transcript of G-patch domain containing 4, humanhuman

TSL 3

Gene GPATCH4, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-212ENST00000525375 IL18RAPO95256 599 aa12.89□□□□□ -0.35
GPATCH4-212ENST00000525375 SMC2O95347 1197 aa12.89□□□□□ -0.35
GPATCH4-212ENST00000525375 ITGB3P05106 788 aa12.89□□□□□ -0.35
GPATCH4-212ENST00000525375 KCNA5P22460 613 aa12.89□□□□□ -0.35
GPATCH4-212ENST00000525375 FGFR3P22607 806 aa12.89□□□□□ -0.35
GPATCH4-212ENST00000525375 POLR2BP30876 1174 aaKnown RBP12.89□□□□□ -0.35
GPATCH4-212ENST00000525375 AARSP49588 968 aaKnown RBP eCLIP12.89□□□□□ -0.35
GPATCH4-212ENST00000525375 TFAMQ00059 246 aaKnown RBP12.89□□□□□ -0.35
GPATCH4-212ENST00000525375 ADAM15Q13444 863 aa12.89□□□□□ -0.35
GPATCH4-212ENST00000525375 USP41Q3LFD5 358 aa12.89□□□□□ -0.35
GPATCH4-212ENST00000525375 C1orf220Q5T0J3 134 aa12.89□□□□□ -0.35
GPATCH4-212ENST00000525375 EP400NLQ6ZTU2 488 aa12.89□□□□□ -0.35
GPATCH4-212ENST00000525375 CEP57Q86XR8 500 aa12.89□□□□□ -0.35
GPATCH4-212ENST00000525375 CD302Q8IX05 232 aa12.89□□□□□ -0.35
GPATCH4-212ENST00000525375 EFHBQ8N7U6 833 aa12.89□□□□□ -0.35
GPATCH4-212ENST00000525375 BEST2Q8NFU1 509 aa12.89□□□□□ -0.35
GPATCH4-212ENST00000525375 ZNF516Q92618 1163 aa12.89□□□□□ -0.35
GPATCH4-212ENST00000525375 CCDC47Q96A33 483 aaKnown RBP12.89□□□□□ -0.35
GPATCH4-212ENST00000525375 CCDC127Q96BQ5 260 aa12.89□□□□□ -0.35
GPATCH4-212ENST00000525375 MFSD14AQ96MC6 490 aa12.89□□□□□ -0.35
GPATCH4-212ENST00000525375 GBP4Q96PP9 640 aa12.89□□□□□ -0.35
GPATCH4-212ENST00000525375 APOL5Q9BWW9 433 aa12.89□□□□□ -0.35
GPATCH4-212ENST00000525375 RXFP1Q9HBX9 757 aa12.89□□□□□ -0.35
GPATCH4-212ENST00000525375 DPP3Q9NY33 737 aa12.89□□□□□ -0.35
GPATCH4-212ENST00000525375 THEGQ9P2T0 379 aa12.89□□□□□ -0.35
GPATCH4-212ENST00000525375 DERAQ9Y315 318 aa12.89□□□□□ -0.35
GPATCH4-212ENST00000525375 ZNF233A6NK53 670 aa12.88□□□□□ -0.35
GPATCH4-212ENST00000525375 LRRIQ3A6PVS8 624 aaPredicted RBP12.88□□□□□ -0.35
GPATCH4-212ENST00000525375 KIAA0391O15091 583 aaKnown RBP12.88□□□□□ -0.35
GPATCH4-212ENST00000525375 EXOC3O60645 756 aa12.88□□□□□ -0.35
GPATCH4-212ENST00000525375 DLATP10515 647 aaKnown RBP12.88□□□□□ -0.35
GPATCH4-212ENST00000525375 NR2F2P24468 414 aa12.88□□□□□ -0.35
GPATCH4-212ENST00000525375 RPL9P32969 192 aaKnown RBP12.88□□□□□ -0.35
GPATCH4-212ENST00000525375 MCM4P33991 863 aa12.88□□□□□ -0.35
GPATCH4-212ENST00000525375 CLCN4P51793 760 aa12.88□□□□□ -0.35
GPATCH4-212ENST00000525375 SNRPFP62306 86 aaKnown RBP12.88□□□□□ -0.35
GPATCH4-212ENST00000525375 POU5F1Q01860 360 aaKnown RBP12.88□□□□□ -0.35
GPATCH4-212ENST00000525375 PSMD6Q15008 389 aa12.88□□□□□ -0.35
GPATCH4-212ENST00000525375 PSMD5Q16401 504 aa12.88□□□□□ -0.35
GPATCH4-212ENST00000525375 COBLL1Q53SF7 1204 aa12.88□□□□□ -0.35
GPATCH4-212ENST00000525375 PDE12Q6L8Q7 609 aaKnown RBP12.88□□□□□ -0.35
GPATCH4-212ENST00000525375 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.88□□□□□ -0.35
GPATCH4-212ENST00000525375 SLC9A9Q8IVB4 645 aa12.88□□□□□ -0.35
GPATCH4-212ENST00000525375 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.88□□□□□ -0.35
GPATCH4-212ENST00000525375 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.88□□□□□ -0.35
GPATCH4-212ENST00000525375 SLC22A17Q8WUG5 538 aa12.88□□□□□ -0.35
GPATCH4-212ENST00000525375 PIK3R5Q8WYR1 880 aa12.88□□□□□ -0.35
GPATCH4-212ENST00000525375 HLA-CQ95604 372 aa12.88□□□□□ -0.35
GPATCH4-212ENST00000525375 BORCS6Q96GS4 357 aa12.88□□□□□ -0.35
GPATCH4-212ENST00000525375 MSLNLQ96KJ4 702 aa12.88□□□□□ -0.35
GPATCH4-212ENST00000525375 SUSD3Q96L08 255 aa12.88□□□□□ -0.35
GPATCH4-212ENST00000525375 MED15Q96RN5 788 aa12.88□□□□□ -0.35
GPATCH4-212ENST00000525375 CGRRF1Q99675 332 aa12.88□□□□□ -0.35
GPATCH4-212ENST00000525375 CLSTN3Q9BQT9 956 aa12.88□□□□□ -0.35
GPATCH4-212ENST00000525375 TTPALQ9BTX7 342 aa12.88□□□□□ -0.35
GPATCH4-212ENST00000525375 MRPL17Q9NRX2 175 aaKnown RBP12.88□□□□□ -0.35
GPATCH4-212ENST00000525375 INTS13Q9NVM9 706 aa12.88□□□□□ -0.35
GPATCH4-212ENST00000525375 RMND1Q9NWS8 449 aa12.88□□□□□ -0.35
GPATCH4-212ENST00000525375 KIAA1468Q9P260 1216 aa12.88□□□□□ -0.35
GPATCH4-212ENST00000525375 CTNND2Q9UQB3 1225 aa12.88□□□□□ -0.35
GPATCH4-212ENST00000525375 CARNS1A5YM72 827 aa12.87□□□□□ -0.35
GPATCH4-212ENST00000525375 GRXCR2A6NFK2 248 aa12.87□□□□□ -0.35
GPATCH4-212ENST00000525375 M0QZQ0 153 aa12.87□□□□□ -0.35
GPATCH4-212ENST00000525375 CALUO43852 315 aaPredicted RBP12.87□□□□□ -0.35
GPATCH4-212ENST00000525375 SPATA31D3P0C874 917 aa12.87□□□□□ -0.35
GPATCH4-212ENST00000525375 TRIM49P0CI25 452 aa12.87□□□□□ -0.35
GPATCH4-212ENST00000525375 TRIM49CP0CI26 452 aa12.87□□□□□ -0.35
GPATCH4-212ENST00000525375 NDUFV1P49821 464 aa12.87□□□□□ -0.35
GPATCH4-212ENST00000525375 CDR1P51861 262 aa12.87□□□□□ -0.35
GPATCH4-212ENST00000525375 LILRA4P59901 499 aa12.87□□□□□ -0.35
GPATCH4-212ENST00000525375 NFIL3Q16649 462 aa12.87□□□□□ -0.35
GPATCH4-212ENST00000525375 VARS2Q5ST30 1063 aaKnown RBP12.87□□□□□ -0.35
GPATCH4-212ENST00000525375 CEP135Q66GS9 1140 aa12.87□□□□□ -0.35
GPATCH4-212ENST00000525375 ANKRD40Q6AI12 368 aa12.87□□□□□ -0.35
GPATCH4-212ENST00000525375 CENPPQ6IPU0 288 aa12.87□□□□□ -0.35
GPATCH4-212ENST00000525375 KLHL10Q6JEL2 608 aa12.87□□□□□ -0.35
GPATCH4-212ENST00000525375 SYCE2Q6PIF2 218 aa12.87□□□□□ -0.35
GPATCH4-212ENST00000525375 SPATA31D4Q6ZUB0 917 aa12.87□□□□□ -0.35
GPATCH4-212ENST00000525375 ZC3H3Q8IXZ2 948 aaKnown RBP12.87□□□□□ -0.35
GPATCH4-212ENST00000525375 C12orf76Q8N812 135 aaPredicted RBP12.87□□□□□ -0.35
GPATCH4-212ENST00000525375 TMEM174Q8WUU8 243 aa12.87□□□□□ -0.35
GPATCH4-212ENST00000525375 CCDC34Q96HJ3 373 aa12.87□□□□□ -0.35
GPATCH4-212ENST00000525375 DUSP9Q99956 384 aaKnown RBP12.87□□□□□ -0.35
GPATCH4-212ENST00000525375 CGNQ9P2M7 1197 aaKnown RBP12.87□□□□□ -0.35
GPATCH4-212ENST00000525375 NUB1Q9Y5A7 615 aa12.87□□□□□ -0.35
GPATCH4-212ENST00000525375 TGM5O43548 720 aa12.86□□□□□ -0.35
GPATCH4-212ENST00000525375 HCRTO43612 131 aa12.86□□□□□ -0.35
GPATCH4-212ENST00000525375 TBC1D4O60343 1298 aa12.86□□□□□ -0.35
GPATCH4-212ENST00000525375 WEE2P0C1S8 567 aa12.86□□□□□ -0.35
GPATCH4-212ENST00000525375 OR4Q2P0C623 313 aa12.86□□□□□ -0.35
GPATCH4-212ENST00000525375 TMEM191BP0C7N4 346 aa12.86□□□□□ -0.35
GPATCH4-212ENST00000525375 IL9P15248 144 aa12.86□□□□□ -0.35
GPATCH4-212ENST00000525375 STX17P56962 302 aa12.86□□□□□ -0.35
GPATCH4-212ENST00000525375 MRPL58Q14197 206 aaKnown RBP12.86□□□□□ -0.35
GPATCH4-212ENST00000525375 CCDC142Q17RM4 750 aa12.86□□□□□ -0.35
GPATCH4-212ENST00000525375 TDRD10Q5VZ19 366 aaKnown RBP12.86□□□□□ -0.35
GPATCH4-212ENST00000525375 KIAA1841Q6NSI8 718 aa12.86□□□□□ -0.35
GPATCH4-212ENST00000525375 PALB2Q86YC2 1186 aa12.86□□□□□ -0.35
GPATCH4-212ENST00000525375 WDR49Q8IV35 697 aa12.86□□□□□ -0.35
GPATCH4-212ENST00000525375 GOLGA5Q8TBA6 731 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms