RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 ZNF197O14709 1029 aa26.19■■□□□ 1.78
USP47-205ENST00000525257 SLC16A4O15374 487 aa26.19■■□□□ 1.78
USP47-205ENST00000525257 SEC24BO95487 1268 aa26.19■■□□□ 1.78
USP47-205ENST00000525257 CDC25AP30304 524 aa26.19■■□□□ 1.78
USP47-205ENST00000525257 MCM4P33991 863 aa26.19■■□□□ 1.78
USP47-205ENST00000525257 HMGN5P82970 282 aaKnown RBP26.19■■□□□ 1.78
USP47-205ENST00000525257 ADCY1Q08828 1119 aa26.19■■□□□ 1.78
USP47-205ENST00000525257 FZD5Q13467 585 aa26.19■■□□□ 1.78
USP47-205ENST00000525257 SEZ6Q53EL9 994 aa26.19■■□□□ 1.78
USP47-205ENST00000525257 KRT79Q5XKE5 535 aa26.19■■□□□ 1.78
USP47-205ENST00000525257 TPGS2Q68CL5 300 aa26.19■■□□□ 1.78
USP47-205ENST00000525257 ZNF280DQ6N043 979 aa26.19■■□□□ 1.78
USP47-205ENST00000525257 RINT1Q6NUQ1 792 aa26.19■■□□□ 1.78
USP47-205ENST00000525257 HS6ST3Q8IZP7 471 aa26.19■■□□□ 1.78
USP47-205ENST00000525257 ELMOD1Q8N336 334 aa26.19■■□□□ 1.78
USP47-205ENST00000525257 ZBTB44Q8NCP5 570 aa26.19■■□□□ 1.78
USP47-205ENST00000525257 BORCS6Q96GS4 357 aa26.19■■□□□ 1.78
USP47-205ENST00000525257 SUSD3Q96L08 255 aa26.19■■□□□ 1.78
USP47-205ENST00000525257 DLL3Q9NYJ7 618 aa26.19■■□□□ 1.78
USP47-205ENST00000525257 ANKFY1Q9P2R3 1169 aa26.19■■□□□ 1.78
USP47-205ENST00000525257 SFI1A8K8P3 1242 aa26.18■■□□□ 1.78
USP47-205ENST00000525257 COL4A2P08572 1712 aa26.18■■□□□ 1.78
USP47-205ENST00000525257 TOB1P50616 345 aaPredicted RBP26.18■■□□□ 1.78
USP47-205ENST00000525257 MTAPQ13126 283 aa26.18■■□□□ 1.78
USP47-205ENST00000525257 RSPO4Q2I0M5 234 aaPredicted RBP26.18■■□□□ 1.78
USP47-205ENST00000525257 CYP4A22Q5TCH4 519 aa26.18■■□□□ 1.78
USP47-205ENST00000525257 KCNK18Q7Z418 384 aa26.18■■□□□ 1.78
USP47-205ENST00000525257 TBC1D32Q96NH3 1257 aa26.18■■□□□ 1.78
USP47-205ENST00000525257 ASB16Q96NS5 453 aa26.18■■□□□ 1.78
USP47-205ENST00000525257 TRMT61BQ9BVS5 477 aaKnown RBP26.18■■□□□ 1.78
USP47-205ENST00000525257 PRMT8Q9NR22 394 aaPredicted RBP26.18■■□□□ 1.78
USP47-205ENST00000525257 SMG5Q9UPR3 1016 aaKnown RBP26.18■■□□□ 1.78
USP47-205ENST00000525257 TICRRQ7Z2Z1 1910 aa26.18■■□□□ 1.78
USP47-205ENST00000525257 TWF1Q12792 350 aa26.17■■□□□ 1.78
USP47-205ENST00000525257 IL17AQ16552 155 aa26.17■■□□□ 1.78
USP47-205ENST00000525257 IQCEQ6IPM2 695 aa26.17■■□□□ 1.78
USP47-205ENST00000525257 C1orf186Q6ZWK4 172 aa26.17■■□□□ 1.78
USP47-205ENST00000525257 DDX12PQ92771 950 aa26.17■■□□□ 1.78
USP47-205ENST00000525257 NELL1Q92832 810 aa26.17■■□□□ 1.78
USP47-205ENST00000525257 ZSWIM3Q96MP5 696 aa26.17■■□□□ 1.78
USP47-205ENST00000525257 CEP72Q9P209 647 aa26.17■■□□□ 1.78
USP47-205ENST00000525257 TUBGCP4Q9UGJ1 667 aa26.17■■□□□ 1.78
USP47-205ENST00000525257 AFF4Q9UHB7 1163 aaKnown RBP26.17■■□□□ 1.78
USP47-205ENST00000525257 MICAL2O94851 1124 aa26.16■■□□□ 1.78
USP47-205ENST00000525257 MYL4P12829 197 aa26.16■■□□□ 1.78
USP47-205ENST00000525257 CPB1P15086 417 aa26.16■■□□□ 1.78
USP47-205ENST00000525257 RAD51AP2Q09MP3 1159 aa26.16■■□□□ 1.78
USP47-205ENST00000525257 STRN3Q13033 797 aa26.16■■□□□ 1.78
USP47-205ENST00000525257 NOLC1Q14978 699 aaKnown RBP eCLIP26.16■■□□□ 1.78
USP47-205ENST00000525257 ZRSR1Q15695 479 aaKnown RBP26.16■■□□□ 1.78
USP47-205ENST00000525257 VITQ6UXI7 678 aa26.16■■□□□ 1.78
USP47-205ENST00000525257 TMEM130Q8N3G9 435 aa26.16■■□□□ 1.78
USP47-205ENST00000525257 APPL2Q8NEU8 664 aa26.16■■□□□ 1.78
USP47-205ENST00000525257 ZNF512Q96ME7 567 aaPredicted RBP26.16■■□□□ 1.78
USP47-205ENST00000525257 EPC1Q9H2F5 836 aa26.16■■□□□ 1.78
USP47-205ENST00000525257 C17orf75Q9HAS0 396 aa26.16■■□□□ 1.78
USP47-205ENST00000525257 F5P12259 2224 aa26.16■■□□□ 1.78
USP47-205ENST00000525257 MYH11P35749 1972 aa26.15■■□□□ 1.78
USP47-205ENST00000525257 MAN2B1O00754 1011 aa26.15■■□□□ 1.78
USP47-205ENST00000525257 EIF5BO60841 1220 aaKnown RBP26.15■■□□□ 1.78
USP47-205ENST00000525257 LILRB5O75023 590 aa26.15■■□□□ 1.78
USP47-205ENST00000525257 GJA1P17302 382 aa26.15■■□□□ 1.78
USP47-205ENST00000525257 U2AF2P26368 475 aaKnown RBP eCLIP26.15■■□□□ 1.78
USP47-205ENST00000525257 GDI1P31150 447 aa26.15■■□□□ 1.78
USP47-205ENST00000525257 SLC10A6Q3KNW5 377 aa26.15■■□□□ 1.78
USP47-205ENST00000525257 SMARCD2Q92925 531 aa26.15■■□□□ 1.78
USP47-205ENST00000525257 IRF7Q92985 503 aa26.15■■□□□ 1.78
USP47-205ENST00000525257 MMTAG2Q9BU76 263 aaKnown RBP26.15■■□□□ 1.78
USP47-205ENST00000525257 MOSPD3O75425 235 aa26.14■■□□□ 1.78
USP47-205ENST00000525257 TOM1L1O75674 476 aa26.14■■□□□ 1.78
USP47-205ENST00000525257 PSMC3P17980 439 aa26.14■■□□□ 1.78
USP47-205ENST00000525257 VIPR2P41587 438 aa26.14■■□□□ 1.78
USP47-205ENST00000525257 RNF19BQ6ZMZ0 732 aa26.14■■□□□ 1.78
USP47-205ENST00000525257 ZNF687Q8N1G0 1237 aa26.14■■□□□ 1.78
USP47-205ENST00000525257 SECISBP2LQ93073 1101 aaKnown RBP26.14■■□□□ 1.78
USP47-205ENST00000525257 ZNF334Q9HCZ1 680 aaPredicted RBP26.14■■□□□ 1.78
USP47-205ENST00000525257 ASAH2Q9NR71 780 aa26.14■■□□□ 1.78
USP47-205ENST00000525257 PCDHB8Q9UN66 801 aa26.14■■□□□ 1.78
USP47-205ENST00000525257 LAD1O00515 517 aa26.13■■□□□ 1.77
USP47-205ENST00000525257 GUCY2CP25092 1073 aa26.13■■□□□ 1.77
USP47-205ENST00000525257 MARCKSP29966 332 aaPredicted RBP26.13■■□□□ 1.77
USP47-205ENST00000525257 SPAG1Q07617 926 aa26.13■■□□□ 1.77
USP47-205ENST00000525257 DTHD1Q6ZMT9 781 aa26.13■■□□□ 1.77
USP47-205ENST00000525257 MAP4K3Q8IVH8 894 aa26.13■■□□□ 1.77
USP47-205ENST00000525257 TMEM161BQ8NDZ6 487 aa26.13■■□□□ 1.77
USP47-205ENST00000525257 ZSCAN18Q8TBC5 510 aaPredicted RBP26.13■■□□□ 1.77
USP47-205ENST00000525257 ZSCAN31Q96LW9 406 aaPredicted RBP26.13■■□□□ 1.77
USP47-205ENST00000525257 NTPCRQ9BSD7 190 aaKnown RBP26.13■■□□□ 1.77
USP47-205ENST00000525257 TIPINQ9BVW5 301 aa26.13■■□□□ 1.77
USP47-205ENST00000525257 CHRDQ9H2X0 955 aa26.13■■□□□ 1.77
USP47-205ENST00000525257 PIAS3Q9Y6X2 628 aa26.13■■□□□ 1.77
USP47-205ENST00000525257 NCANO14594 1321 aa26.13■■□□□ 1.77
USP47-205ENST00000525257 CXCL8P10145 99 aa26.12■■□□□ 1.77
USP47-205ENST00000525257 PRPHP41219 470 aa26.12■■□□□ 1.77
USP47-205ENST00000525257 MATR3P43243 847 aaKnown RBP eCLIP26.12■■□□□ 1.771e-6■■■■■ 30.2
USP47-205ENST00000525257 TEAD2Q15562 447 aa26.12■■□□□ 1.77
USP47-205ENST00000525257 SPIRE2Q8WWL2 714 aa26.12■■□□□ 1.77
USP47-205ENST00000525257 FAM3CQ92520 227 aa26.12■■□□□ 1.77
USP47-205ENST00000525257 SLITRK6Q9H5Y7 841 aa26.12■■□□□ 1.77
USP47-205ENST00000525257 PPP4R2Q9NY27 417 aa26.12■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms