RNA–Protein interactions for RNA: ENST00000525064.5

CLNS1A-202, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,121 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-202ENST00000525064 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.89□□□□□ -0.35
CLNS1A-202ENST00000525064 NUB1Q9Y5A7 615 aa12.89□□□□□ -0.35
CLNS1A-202ENST00000525064 CLIC4Q9Y696 253 aa12.89□□□□□ -0.35
CLNS1A-202ENST00000525064 FAM186AA6NE01 2351 aa12.89□□□□□ -0.35
CLNS1A-202ENST00000525064 VPS37CA5D8V6 355 aaPredicted RBP12.88□□□□□ -0.35
CLNS1A-202ENST00000525064 PRR23AA6NEV1 266 aa12.88□□□□□ -0.35
CLNS1A-202ENST00000525064 LACTBL1A8MY62 500 aa12.88□□□□□ -0.35
CLNS1A-202ENST00000525064 TISP43B9A030 160 aa12.88□□□□□ -0.35
CLNS1A-202ENST00000525064 FAM13AO94988 1023 aa12.88□□□□□ -0.35
CLNS1A-202ENST00000525064 PIGRP01833 764 aa12.88□□□□□ -0.35
CLNS1A-202ENST00000525064 NMT1P30419 496 aaKnown RBP12.88□□□□□ -0.35
CLNS1A-202ENST00000525064 RPL9P32969 192 aaKnown RBP12.88□□□□□ -0.35
CLNS1A-202ENST00000525064 UBA7P41226 1012 aa12.88□□□□□ -0.35
CLNS1A-202ENST00000525064 CCR2P41597 374 aa12.88□□□□□ -0.35
CLNS1A-202ENST00000525064 LIG4P49917 911 aa12.88□□□□□ -0.35
CLNS1A-202ENST00000525064 ZNF131P52739 623 aa12.88□□□□□ -0.35
CLNS1A-202ENST00000525064 ZBTB6Q15916 424 aa12.88□□□□□ -0.35
CLNS1A-202ENST00000525064 ENOX2Q16206 610 aaKnown RBP12.88□□□□□ -0.35
CLNS1A-202ENST00000525064 CTXN3Q4LDR2 81 aa12.88□□□□□ -0.35
CLNS1A-202ENST00000525064 FAM173BQ6P4H8 233 aa12.88□□□□□ -0.35
CLNS1A-202ENST00000525064 KCTD17Q8N5Z5 321 aa12.88□□□□□ -0.35
CLNS1A-202ENST00000525064 MYCT1Q8N699 235 aa12.88□□□□□ -0.35
CLNS1A-202ENST00000525064 ZNF461Q8TAF7 563 aa12.88□□□□□ -0.35
CLNS1A-202ENST00000525064 KCNN1Q92952 543 aa12.88□□□□□ -0.35
CLNS1A-202ENST00000525064 MCRS1Q96EZ8 462 aa12.88□□□□□ -0.35
CLNS1A-202ENST00000525064 CALML4Q96GE6 196 aa12.88□□□□□ -0.35
CLNS1A-202ENST00000525064 PLA2G2FQ9BZM2 168 aa12.88□□□□□ -0.35
CLNS1A-202ENST00000525064 IKZF4Q9H2S9 585 aa12.88□□□□□ -0.35
CLNS1A-202ENST00000525064 DLGAP2Q9P1A6 1054 aa12.88□□□□□ -0.35
CLNS1A-202ENST00000525064 TBX20Q9UMR3 447 aa12.88□□□□□ -0.35
CLNS1A-202ENST00000525064 PCDHB8Q9UN66 801 aa12.88□□□□□ -0.35
CLNS1A-202ENST00000525064 TIMM13Q9Y5L4 95 aaPredicted RBP12.88□□□□□ -0.35
CLNS1A-202ENST00000525064 INSL5Q9Y5Q6 135 aa12.88□□□□□ -0.35
CLNS1A-202ENST00000525064 ZFP37Q9Y6Q3 630 aaPredicted RBP12.88□□□□□ -0.35
CLNS1A-202ENST00000525064 DENND4CQ5VZ89 1909 aa12.88□□□□□ -0.35
CLNS1A-202ENST00000525064 NUP210Q8TEM1 1887 aaPredicted RBP12.87□□□□□ -0.35
CLNS1A-202ENST00000525064 KIF26AQ9ULI4 1882 aaPredicted RBP12.87□□□□□ -0.35
CLNS1A-202ENST00000525064 PRRG1O14668 218 aa12.87□□□□□ -0.35
CLNS1A-202ENST00000525064 HNRNPDLO14979 420 aaKnown RBP12.87□□□□□ -0.35
CLNS1A-202ENST00000525064 SLC26A4O43511 780 aa12.87□□□□□ -0.35
CLNS1A-202ENST00000525064 VNN2O95498 520 aa12.87□□□□□ -0.35
CLNS1A-202ENST00000525064 LRG1P02750 347 aa12.87□□□□□ -0.35
CLNS1A-202ENST00000525064 CLTAP09496 248 aa12.87□□□□□ -0.35
CLNS1A-202ENST00000525064 OR4Q2P0C623 313 aa12.87□□□□□ -0.35
CLNS1A-202ENST00000525064 GLULP15104 373 aa12.87□□□□□ -0.35
CLNS1A-202ENST00000525064 ATF2P15336 505 aa12.87□□□□□ -0.35
CLNS1A-202ENST00000525064 RFX1P22670 979 aa12.87□□□□□ -0.35
CLNS1A-202ENST00000525064 MARCKSP29966 332 aaPredicted RBP12.87□□□□□ -0.35
CLNS1A-202ENST00000525064 LRPAP1P30533 357 aa12.87□□□□□ -0.35
CLNS1A-202ENST00000525064 LONP1P36776 959 aaKnown RBP12.87□□□□□ -0.35
CLNS1A-202ENST00000525064 RESTQ13127 1097 aa12.87□□□□□ -0.35
CLNS1A-202ENST00000525064 PTPAQ15257 358 aa12.87□□□□□ -0.35
CLNS1A-202ENST00000525064 PRSS36Q5K4E3 855 aa12.87□□□□□ -0.35
CLNS1A-202ENST00000525064 PHLDB3Q6NSJ2 640 aa12.87□□□□□ -0.35
CLNS1A-202ENST00000525064 RNF19BQ6ZMZ0 732 aa12.87□□□□□ -0.35
CLNS1A-202ENST00000525064 MTSS1LQ765P7 747 aa12.87□□□□□ -0.35
CLNS1A-202ENST00000525064 BRAPQ7Z569 592 aa12.87□□□□□ -0.35
CLNS1A-202ENST00000525064 HS6ST3Q8IZP7 471 aa12.87□□□□□ -0.35
CLNS1A-202ENST00000525064 LARP4BQ92615 738 aaKnown RBP12.87□□□□□ -0.35
CLNS1A-202ENST00000525064 EPSTI1Q96J88 318 aa12.87□□□□□ -0.35
CLNS1A-202ENST00000525064 CORO1BQ9BR76 489 aa12.87□□□□□ -0.35
CLNS1A-202ENST00000525064 ZHX3Q9H4I2 956 aa12.87□□□□□ -0.35
CLNS1A-202ENST00000525064 PARVGQ9HBI0 331 aa12.87□□□□□ -0.35
CLNS1A-202ENST00000525064 CYP4F11Q9HBI6 524 aa12.87□□□□□ -0.35
CLNS1A-202ENST00000525064 KCNH3Q9ULD8 1083 aa12.87□□□□□ -0.35
CLNS1A-202ENST00000525064 MRPS23Q9Y3D9 190 aaKnown RBP12.87□□□□□ -0.35
CLNS1A-202ENST00000525064 OBSL1O75147 1896 aa12.87□□□□□ -0.35
CLNS1A-202ENST00000525064 NCANO14594 1321 aa12.87□□□□□ -0.35
CLNS1A-202ENST00000525064 RIF1Q5UIP0 2472 aaKnown RBP12.86□□□□□ -0.35
CLNS1A-202ENST00000525064 ANKRD63C9JTQ0 380 aa12.86□□□□□ -0.35
CLNS1A-202ENST00000525064 H7C4K7 107 aa12.86□□□□□ -0.35
CLNS1A-202ENST00000525064 M0QZQ0 153 aa12.86□□□□□ -0.35
CLNS1A-202ENST00000525064 OGTO15294 1046 aa12.86□□□□□ -0.35
CLNS1A-202ENST00000525064 TRAK2O60296 914 aa12.86□□□□□ -0.35
CLNS1A-202ENST00000525064 FCARP24071 287 aa12.86□□□□□ -0.35
CLNS1A-202ENST00000525064 ELF1P32519 619 aa12.86□□□□□ -0.35
CLNS1A-202ENST00000525064 AARSP49588 968 aaKnown RBP eCLIP12.86□□□□□ -0.35
CLNS1A-202ENST00000525064 PPP2R3AQ06190 1150 aa12.86□□□□□ -0.35
CLNS1A-202ENST00000525064 ADCY1Q08828 1119 aa12.86□□□□□ -0.35
CLNS1A-202ENST00000525064 SNW1Q13573 536 aaKnown RBP12.86□□□□□ -0.35
CLNS1A-202ENST00000525064 ZC2HC1CQ53FD0 456 aaPredicted RBP12.86□□□□□ -0.35
CLNS1A-202ENST00000525064 JADE1Q6IE81 842 aa12.86□□□□□ -0.35
CLNS1A-202ENST00000525064 ZNF280DQ6N043 979 aa12.86□□□□□ -0.35
CLNS1A-202ENST00000525064 RTL10Q7L3V2 364 aa12.86□□□□□ -0.35
CLNS1A-202ENST00000525064 MAP4K3Q8IVH8 894 aa12.86□□□□□ -0.35
CLNS1A-202ENST00000525064 TCEAL8Q8IYN2 117 aa12.86□□□□□ -0.35
CLNS1A-202ENST00000525064 PJA1Q8NG27 643 aa12.86□□□□□ -0.35
CLNS1A-202ENST00000525064 CCSER1Q9C0I3 900 aa12.86□□□□□ -0.35
CLNS1A-202ENST00000525064 CRISPLD1Q9H336 500 aa12.86□□□□□ -0.35
CLNS1A-202ENST00000525064 PLEKHA5Q9HAU0 1116 aa12.86□□□□□ -0.35
CLNS1A-202ENST00000525064 AVENQ9NQS1 362 aaPredicted RBP12.86□□□□□ -0.35
CLNS1A-202ENST00000525064 CEP72Q9P209 647 aa12.86□□□□□ -0.35
CLNS1A-202ENST00000525064 FBXO2Q9UK22 296 aaPredicted RBP12.86□□□□□ -0.35
CLNS1A-202ENST00000525064 UBQLN1Q9UMX0 589 aaKnown RBP12.86□□□□□ -0.35
CLNS1A-202ENST00000525064 PTPRZ1P23471 2315 aaPredicted RBP12.86□□□□□ -0.35
CLNS1A-202ENST00000525064 A0A0B4J269 797 aa12.85□□□□□ -0.35
CLNS1A-202ENST00000525064 H0YCG3 227 aa12.85□□□□□ -0.35
CLNS1A-202ENST00000525064 MOSPD3O75425 235 aa12.85□□□□□ -0.35
CLNS1A-202ENST00000525064 BMP15O95972 392 aa12.85□□□□□ -0.35
CLNS1A-202ENST00000525064 KRT18P05783 430 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms