RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 SRFP11831 508 aa8.29□□□□□ -1.08
NEDD8-203ENST00000524927 IBSPP21815 317 aaPredicted RBP8.29□□□□□ -1.08
NEDD8-203ENST00000524927 TPP2P29144 1249 aaPredicted RBP8.29□□□□□ -1.08
NEDD8-203ENST00000524927 GFRA1P56159 465 aa8.29□□□□□ -1.08
NEDD8-203ENST00000524927 GSTO1P78417 241 aa8.29□□□□□ -1.08
NEDD8-203ENST00000524927 MECOMQ03112 1051 aa8.29□□□□□ -1.08
NEDD8-203ENST00000524927 SCRN1Q12765 414 aa8.29□□□□□ -1.08
NEDD8-203ENST00000524927 TDGQ13569 410 aa8.29□□□□□ -1.08
NEDD8-203ENST00000524927 PTGISQ16647 500 aa8.29□□□□□ -1.08
NEDD8-203ENST00000524927 IQSEC1Q6DN90 963 aa8.29□□□□□ -1.08
NEDD8-203ENST00000524927 RBM23Q86U06 439 aaKnown RBP8.29□□□□□ -1.08
NEDD8-203ENST00000524927 TSPYL5Q86VY4 417 aaPredicted RBP8.29□□□□□ -1.08
NEDD8-203ENST00000524927 SPACA3Q8IXA5 215 aa8.29□□□□□ -1.08
NEDD8-203ENST00000524927 P2RX5Q93086 422 aa8.29□□□□□ -1.08
NEDD8-203ENST00000524927 CDCA3Q99618 268 aaPredicted RBP8.29□□□□□ -1.08
NEDD8-203ENST00000524927 TLE6Q9H808 572 aa8.29□□□□□ -1.08
NEDD8-203ENST00000524927 WNT16Q9UBV4 365 aa8.29□□□□□ -1.08
NEDD8-203ENST00000524927 ABCF2Q9UG63 623 aa8.29□□□□□ -1.08
NEDD8-203ENST00000524927 DUSP12Q9UNI6 340 aa8.29□□□□□ -1.08
NEDD8-203ENST00000524927 RAI2Q9Y5P3 530 aa8.29□□□□□ -1.08
NEDD8-203ENST00000524927 SCN10AQ9Y5Y9 1956 aa8.29□□□□□ -1.08
NEDD8-203ENST00000524927 AKAP13Q12802 2813 aa8.29□□□□□ -1.08
NEDD8-203ENST00000524927 MCM3APO60318 1980 aa8.28□□□□□ -1.08
NEDD8-203ENST00000524927 WASH4PA8MWX3 477 aa8.28□□□□□ -1.08
NEDD8-203ENST00000524927 CSPG5O95196 566 aa8.28□□□□□ -1.08
NEDD8-203ENST00000524927 HLA-DOAP06340 250 aa8.28□□□□□ -1.08
NEDD8-203ENST00000524927 CKBP12277 381 aa8.28□□□□□ -1.08
NEDD8-203ENST00000524927 HOXB8P17481 243 aaPredicted RBP8.28□□□□□ -1.08
NEDD8-203ENST00000524927 CPT1AP50416 773 aa8.28□□□□□ -1.08
NEDD8-203ENST00000524927 CLCN7P51798 805 aa8.28□□□□□ -1.08
NEDD8-203ENST00000524927 PCBP3P57721 371 aaKnown RBP8.28□□□□□ -1.08
NEDD8-203ENST00000524927 SRSF1Q07955 248 aaKnown RBP eCLIP8.28□□□□□ -1.08
NEDD8-203ENST00000524927 CSRP2Q16527 193 aa8.28□□□□□ -1.08
NEDD8-203ENST00000524927 ABCB5Q2M3G0 1257 aa8.28□□□□□ -1.08
NEDD8-203ENST00000524927 ANKRD54Q6NXT1 300 aa8.28□□□□□ -1.08
NEDD8-203ENST00000524927 DHX37Q8IY37 1157 aaKnown RBP8.28□□□□□ -1.08
NEDD8-203ENST00000524927 PLD6Q8N2A8 252 aaKnown RBP8.28□□□□□ -1.08
NEDD8-203ENST00000524927 TDRD5Q8NAT2 981 aaKnown RBP8.28□□□□□ -1.08
NEDD8-203ENST00000524927 TMEM145Q8NBT3 493 aa8.28□□□□□ -1.08
NEDD8-203ENST00000524927 VN1R2Q8NFZ6 395 aa8.28□□□□□ -1.08
NEDD8-203ENST00000524927 DNAAF4Q8WXU2 420 aa8.28□□□□□ -1.08
NEDD8-203ENST00000524927 CABP5Q9NP86 173 aa8.28□□□□□ -1.08
NEDD8-203ENST00000524927 ZSCAN32Q9NX65 697 aa8.28□□□□□ -1.08
NEDD8-203ENST00000524927 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.28□□□□□ -1.08
NEDD8-203ENST00000524927 EMSYQ7Z589 1322 aa8.28□□□□□ -1.08
NEDD8-203ENST00000524927 BLACEA4D250 179 aa8.27□□□□□ -1.09
NEDD8-203ENST00000524927 C2orf71A6NGG8 1288 aa8.27□□□□□ -1.09
NEDD8-203ENST00000524927 VWA5AO00534 786 aa8.27□□□□□ -1.09
NEDD8-203ENST00000524927 KPNA6O60684 536 aa8.27□□□□□ -1.09
NEDD8-203ENST00000524927 KCNK5O95279 499 aa8.27□□□□□ -1.09
NEDD8-203ENST00000524927 RETP07949 1114 aa8.27□□□□□ -1.09
NEDD8-203ENST00000524927 SYPP08247 313 aa8.27□□□□□ -1.09
NEDD8-203ENST00000524927 MYL3P08590 195 aa8.27□□□□□ -1.09
NEDD8-203ENST00000524927 VAV1P15498 845 aa8.27□□□□□ -1.09
NEDD8-203ENST00000524927 DNAJB1P25685 340 aa8.27□□□□□ -1.09
NEDD8-203ENST00000524927 MAP4K2Q12851 820 aa8.27□□□□□ -1.09
NEDD8-203ENST00000524927 IFI16Q16666 785 aaKnown RBP8.27□□□□□ -1.09
NEDD8-203ENST00000524927 PRSS53Q2L4Q9 553 aa8.27□□□□□ -1.09
NEDD8-203ENST00000524927 FNDC3BQ53EP0 1204 aaKnown RBP8.27□□□□□ -1.09
NEDD8-203ENST00000524927 SPECC1Q5M775 1068 aa8.27□□□□□ -1.09
NEDD8-203ENST00000524927 ZNF648Q5T619 568 aaPredicted RBP8.27□□□□□ -1.09
NEDD8-203ENST00000524927 SYCE2Q6PIF2 218 aa8.27□□□□□ -1.09
NEDD8-203ENST00000524927 THAP5Q7Z6K1 395 aa8.27□□□□□ -1.09
NEDD8-203ENST00000524927 FAM133AQ8N9E0 248 aa8.27□□□□□ -1.09
NEDD8-203ENST00000524927 DBF4BQ8NFT6 615 aa8.27□□□□□ -1.09
NEDD8-203ENST00000524927 SPPL3Q8TCT6 385 aa8.27□□□□□ -1.09
NEDD8-203ENST00000524927 ZNF384Q8TF68 577 aa8.27□□□□□ -1.09
NEDD8-203ENST00000524927 NELL1Q92832 810 aa8.27□□□□□ -1.09
NEDD8-203ENST00000524927 NINJ1Q92982 152 aa8.27□□□□□ -1.09
NEDD8-203ENST00000524927 CTAGE1Q96RT6 745 aa8.27□□□□□ -1.09
NEDD8-203ENST00000524927 MCMBPQ9BTE3 642 aa8.27□□□□□ -1.09
NEDD8-203ENST00000524927 STK31Q9BXU1 1019 aa8.27□□□□□ -1.09
NEDD8-203ENST00000524927 MRPL4Q9BYD3 311 aaKnown RBP8.27□□□□□ -1.09
NEDD8-203ENST00000524927 IFIH1Q9BYX4 1025 aaKnown RBP8.27□□□□□ -1.09
NEDD8-203ENST00000524927 TMX1Q9H3N1 280 aa8.27□□□□□ -1.09
NEDD8-203ENST00000524927 SEMA4GQ9NTN9 838 aa8.27□□□□□ -1.09
NEDD8-203ENST00000524927 NDOR1Q9UHB4 597 aa8.27□□□□□ -1.09
NEDD8-203ENST00000524927 DUSP13Q9UII6 198 aa8.27□□□□□ -1.09
NEDD8-203ENST00000524927 PALD1Q9ULE6 856 aa8.27□□□□□ -1.09
NEDD8-203ENST00000524927 SIT1Q9Y3P8 196 aa8.27□□□□□ -1.09
NEDD8-203ENST00000524927 BACE2Q9Y5Z0 518 aa8.27□□□□□ -1.09
NEDD8-203ENST00000524927 A0A1W2PRG0 241 aa8.26□□□□□ -1.09
NEDD8-203ENST00000524927 GRM8O00222 908 aa8.26□□□□□ -1.09
NEDD8-203ENST00000524927 AURKAO14965 403 aa8.26□□□□□ -1.09
NEDD8-203ENST00000524927 RFPL3O75679 317 aa8.26□□□□□ -1.09
NEDD8-203ENST00000524927 DCNP07585 359 aaKnown RBP8.26□□□□□ -1.09
NEDD8-203ENST00000524927 GSTM1P09488 218 aa8.26□□□□□ -1.09
NEDD8-203ENST00000524927 IFNGR1P15260 489 aa8.26□□□□□ -1.09
NEDD8-203ENST00000524927 MASP1P48740 699 aa8.26□□□□□ -1.09
NEDD8-203ENST00000524927 SEPHS1P49903 392 aa8.26□□□□□ -1.09
NEDD8-203ENST00000524927 DUSP6Q16828 381 aa8.26□□□□□ -1.09
NEDD8-203ENST00000524927 CERKLQ49MI3 558 aaPredicted RBP8.26□□□□□ -1.09
NEDD8-203ENST00000524927 BRDTQ58F21 947 aaPredicted RBP8.26□□□□□ -1.09
NEDD8-203ENST00000524927 LAIR1Q6GTX8 287 aa8.26□□□□□ -1.09
NEDD8-203ENST00000524927 C19orf48Q6RUI8 117 aa8.26□□□□□ -1.09
NEDD8-203ENST00000524927 USP53Q70EK8 1073 aa8.26□□□□□ -1.09
NEDD8-203ENST00000524927 ZNF605Q86T29 641 aa8.26□□□□□ -1.09
NEDD8-203ENST00000524927 REPS2Q8NFH8 660 aa8.26□□□□□ -1.09
NEDD8-203ENST00000524927 SH3RF3Q8TEJ3 882 aaPredicted RBP8.26□□□□□ -1.09
NEDD8-203ENST00000524927 FCRL3Q96P31 734 aaPredicted RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms