RNA–Protein interactions for RNA: ENST00000524602.5

CHD7-202, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 1 (best) BASIC

Gene CHD7, Length 3,456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-202ENST00000524602 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.84□□□□□ -0.99
CHD7-202ENST00000524602 ARHGAP28Q9P2N2 729 aa8.84□□□□□ -0.99
CHD7-202ENST00000524602 NFASCO94856 1347 aa8.84□□□□□ -0.99
CHD7-202ENST00000524602 TMEM120BA0PK00 339 aa8.84□□□□□ -1
CHD7-202ENST00000524602 NFKBIEO00221 500 aa8.84□□□□□ -1
CHD7-202ENST00000524602 THAP12O43422 761 aa8.84□□□□□ -1
CHD7-202ENST00000524602 CDH16O75309 829 aa8.84□□□□□ -1
CHD7-202ENST00000524602 ACSL3O95573 720 aa8.84□□□□□ -1
CHD7-202ENST00000524602 EGFRP00533 1210 aa8.84□□□□□ -1
CHD7-202ENST00000524602 PSAPP07602 524 aa8.84□□□□□ -1
CHD7-202ENST00000524602 MYCLP12524 364 aaPredicted RBP8.84□□□□□ -1
CHD7-202ENST00000524602 CETN2P41208 172 aa8.84□□□□□ -1
CHD7-202ENST00000524602 NR1H3Q13133 447 aa8.84□□□□□ -1
CHD7-202ENST00000524602 ZACNQ401N2 412 aa8.84□□□□□ -1
CHD7-202ENST00000524602 EXD1Q8NHP7 514 aa8.84□□□□□ -1
CHD7-202ENST00000524602 JDP2Q8WYK2 163 aa8.84□□□□□ -1
CHD7-202ENST00000524602 BSNDQ8WZ55 320 aa8.84□□□□□ -1
CHD7-202ENST00000524602 CDHR1Q96JP9 859 aa8.84□□□□□ -1
CHD7-202ENST00000524602 DDX23Q9BUQ8 820 aaKnown RBP8.84□□□□□ -1
CHD7-202ENST00000524602 ATP6V0A4Q9HBG4 840 aa8.84□□□□□ -1
CHD7-202ENST00000524602 MYOZ2Q9NPC6 264 aa8.84□□□□□ -1
CHD7-202ENST00000524602 STYXL1Q9Y6J8 313 aa8.84□□□□□ -1
CHD7-202ENST00000524602 TESPA1A2RU30 521 aaPredicted RBP8.83□□□□□ -1
CHD7-202ENST00000524602 STAM2O75886 525 aa8.83□□□□□ -1
CHD7-202ENST00000524602 RRM1P23921 792 aa8.83□□□□□ -1
CHD7-202ENST00000524602 ADCY8P40145 1251 aa8.83□□□□□ -1
CHD7-202ENST00000524602 UBAP2Q5T6F2 1119 aaKnown RBP8.83□□□□□ -1
CHD7-202ENST00000524602 VSTM1Q6UX27 236 aa8.83□□□□□ -1
CHD7-202ENST00000524602 CRELD2Q6UXH1 353 aaPredicted RBP8.83□□□□□ -1
CHD7-202ENST00000524602 PPP1R21Q6ZMI0 780 aa8.83□□□□□ -1
CHD7-202ENST00000524602 ARHGEF18Q6ZSZ5 1173 aa8.83□□□□□ -1
CHD7-202ENST00000524602 ZNF365Q70YC5 407 aa8.83□□□□□ -1
CHD7-202ENST00000524602 VSIG10LQ86VR7 867 aa8.83□□□□□ -1
CHD7-202ENST00000524602 PHF13Q86YI8 300 aaPredicted RBP8.83□□□□□ -1
CHD7-202ENST00000524602 UHMK1Q8TAS1 419 aaKnown RBP8.83□□□□□ -1
CHD7-202ENST00000524602 CKAP2Q8WWK9 683 aa8.83□□□□□ -1
CHD7-202ENST00000524602 GRAMD1AQ96CP6 724 aa8.83□□□□□ -1
CHD7-202ENST00000524602 BICD1Q96G01 975 aa8.83□□□□□ -1
CHD7-202ENST00000524602 KIFC3Q9BVG8 833 aa8.83□□□□□ -1
CHD7-202ENST00000524602 UMODL1Q5DID0 1318 aa8.83□□□□□ -1
CHD7-202ENST00000524602 A0A1B0GUA9 196 aa8.83□□□□□ -1
CHD7-202ENST00000524602 STBD1O95210 358 aa8.83□□□□□ -1
CHD7-202ENST00000524602 TBXAS1P24557 533 aaPredicted RBP8.83□□□□□ -1
CHD7-202ENST00000524602 CHKAP35790 457 aa8.83□□□□□ -1
CHD7-202ENST00000524602 ELF3P78545 371 aaPredicted RBP8.83□□□□□ -1
CHD7-202ENST00000524602 C1QBPQ07021 282 aaKnown RBP8.83□□□□□ -1
CHD7-202ENST00000524602 SNX1Q13596 522 aa8.83□□□□□ -1
CHD7-202ENST00000524602 DRICH1Q6PGQ1 229 aaPredicted RBP8.83□□□□□ -1
CHD7-202ENST00000524602 CCDC63Q8NA47 563 aa8.83□□□□□ -1
CHD7-202ENST00000524602 FNBP1Q96RU3 617 aa8.83□□□□□ -1
CHD7-202ENST00000524602 SH2D3AQ9BRG2 576 aa8.83□□□□□ -1
CHD7-202ENST00000524602 FAM213AQ9BRX8 229 aa8.83□□□□□ -1
CHD7-202ENST00000524602 MTFR1LQ9H019 292 aa8.83□□□□□ -1
CHD7-202ENST00000524602 PPCSQ9HAB8 311 aa8.83□□□□□ -1
CHD7-202ENST00000524602 HOMER2Q9NSB8 354 aa8.83□□□□□ -1
CHD7-202ENST00000524602 CNTN6Q9UQ52 1028 aa8.83□□□□□ -1
CHD7-202ENST00000524602 LDHAP00338 332 aaKnown RBP8.82□□□□□ -1
CHD7-202ENST00000524602 PIGRP01833 764 aa8.82□□□□□ -1
CHD7-202ENST00000524602 IFNAR2P48551 515 aa8.82□□□□□ -1
CHD7-202ENST00000524602 SLFN12LQ6IEE8 588 aa8.82□□□□□ -1
CHD7-202ENST00000524602 PLEKHA7Q6IQ23 1121 aa8.82□□□□□ -1
CHD7-202ENST00000524602 MAGEB18Q96M61 343 aa8.82□□□□□ -1
CHD7-202ENST00000524602 CD248Q9HCU0 757 aa8.82□□□□□ -1
CHD7-202ENST00000524602 UBN1Q9NPG3 1134 aa8.82□□□□□ -1
CHD7-202ENST00000524602 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.82□□□□□ -13e-6■■■■■ 133.4
CHD7-202ENST00000524602 NINJ2Q9NZG7 142 aa8.82□□□□□ -1
CHD7-202ENST00000524602 GABBR1Q9UBS5 961 aa8.82□□□□□ -1
CHD7-202ENST00000524602 TPX2Q9ULW0 747 aaKnown RBP8.82□□□□□ -1
CHD7-202ENST00000524602 ARL2BPQ9Y2Y0 163 aa8.82□□□□□ -1
CHD7-202ENST00000524602 KIAA1217Q5T5P2 1943 aa8.82□□□□□ -1
CHD7-202ENST00000524602 GJB6O95452 261 aa8.82□□□□□ -1
CHD7-202ENST00000524602 C4BPAP04003 597 aaKnown RBP8.82□□□□□ -1
CHD7-202ENST00000524602 EZRP15311 586 aaKnown RBP8.82□□□□□ -1
CHD7-202ENST00000524602 PIK3CAP42336 1068 aa8.82□□□□□ -1
CHD7-202ENST00000524602 LIG4P49917 911 aa8.82□□□□□ -1
CHD7-202ENST00000524602 OAZ1P54368 228 aa8.82□□□□□ -1
CHD7-202ENST00000524602 STRN3Q13033 797 aa8.82□□□□□ -1
CHD7-202ENST00000524602 TNFAIP1Q13829 316 aa8.82□□□□□ -1
CHD7-202ENST00000524602 NEDD9Q14511 834 aa8.82□□□□□ -1
CHD7-202ENST00000524602 ABRAQ8N0Z2 381 aa8.82□□□□□ -1
CHD7-202ENST00000524602 ZCCHC9Q8N567 271 aaKnown RBP8.82□□□□□ -1
CHD7-202ENST00000524602 CPA5Q8WXQ8 436 aa8.82□□□□□ -1
CHD7-202ENST00000524602 TTC25Q96NG3 672 aa8.82□□□□□ -1
CHD7-202ENST00000524602 OSBPL8Q9BZF1 889 aa8.82□□□□□ -1
CHD7-202ENST00000524602 CYP26B1Q9NR63 512 aa8.82□□□□□ -1
CHD7-202ENST00000524602 TCP11X1B4DZS4 312 aa8.82□□□□□ -1
CHD7-202ENST00000524602 HLA-DRAP01903 254 aa8.82□□□□□ -1
CHD7-202ENST00000524602 RALAP11233 206 aa8.82□□□□□ -1
CHD7-202ENST00000524602 KCNA2P16389 499 aa8.82□□□□□ -1
CHD7-202ENST00000524602 ACO1P21399 889 aaKnown RBP8.82□□□□□ -1
CHD7-202ENST00000524602 SLC18A1P54219 525 aa8.82□□□□□ -1
CHD7-202ENST00000524602 NOMO3P69849 1222 aa8.82□□□□□ -1
CHD7-202ENST00000524602 BIRC2Q13490 618 aa8.82□□□□□ -1
CHD7-202ENST00000524602 CUL2Q13617 745 aa8.82□□□□□ -1
CHD7-202ENST00000524602 GALNTL6Q49A17 601 aa8.82□□□□□ -1
CHD7-202ENST00000524602 CCDC38Q502W7 563 aa8.82□□□□□ -1
CHD7-202ENST00000524602 HIBCHQ6NVY1 386 aaPredicted RBP8.82□□□□□ -1
CHD7-202ENST00000524602 ANKRD35Q8N283 1001 aa8.82□□□□□ -1
CHD7-202ENST00000524602 RNF217Q8TC41 542 aa8.82□□□□□ -1
CHD7-202ENST00000524602 ATG4AQ8WYN0 398 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms