RNA–Protein interactions for RNA: ENST00000523541.1

CCNC-213, Transcript of cyclin C, humanhuman

TSL 1 (best)

Gene CCNC, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-213ENST00000523541 GARTP22102 1010 aa18.74■□□□□ 0.59
CCNC-213ENST00000523541 TKTP29401 623 aaKnown RBP18.74■□□□□ 0.59
CCNC-213ENST00000523541 TNFSF9P41273 254 aa18.74■□□□□ 0.59
CCNC-213ENST00000523541 BRCC3P46736 316 aa18.74■□□□□ 0.59
CCNC-213ENST00000523541 SPATA1Q5VX52 437 aa18.74■□□□□ 0.59
CCNC-213ENST00000523541 ZNF461Q8TAF7 563 aa18.74■□□□□ 0.59
CCNC-213ENST00000523541 FEZF2Q8TBJ5 459 aa18.74■□□□□ 0.59
CCNC-213ENST00000523541 POMGNT1Q8WZA1 660 aa18.74■□□□□ 0.59
CCNC-213ENST00000523541 NXPE3Q969Y0 559 aa18.74■□□□□ 0.59
CCNC-213ENST00000523541 ZNF707Q96C28 371 aaPredicted RBP18.74■□□□□ 0.59
CCNC-213ENST00000523541 PCDHA7Q9UN72 937 aa18.74■□□□□ 0.59
CCNC-213ENST00000523541 ZFP37Q9Y6Q3 630 aaPredicted RBP18.74■□□□□ 0.59
CCNC-213ENST00000523541 I3L4J1 428 aa18.73■□□□□ 0.59
CCNC-213ENST00000523541 M0QZQ0 153 aa18.73■□□□□ 0.59
CCNC-213ENST00000523541 TBC1D4O60343 1298 aa18.73■□□□□ 0.59
CCNC-213ENST00000523541 XYLBO75191 536 aa18.73■□□□□ 0.59
CCNC-213ENST00000523541 IL18RAPO95256 599 aa18.73■□□□□ 0.59
CCNC-213ENST00000523541 IGFBP6P24592 240 aaPredicted RBP18.73■□□□□ 0.59
CCNC-213ENST00000523541 AARSP49588 968 aaKnown RBP eCLIP18.73■□□□□ 0.59
CCNC-213ENST00000523541 VARS2Q5ST30 1063 aaKnown RBP18.73■□□□□ 0.59
CCNC-213ENST00000523541 FOXD4L5Q5VV16 416 aaPredicted RBP18.73■□□□□ 0.59
CCNC-213ENST00000523541 RESP18Q5W5W9 173 aa18.73■□□□□ 0.59
CCNC-213ENST00000523541 TPGS2Q68CL5 300 aa18.73■□□□□ 0.59
CCNC-213ENST00000523541 FOXD4L4Q8WXT5 416 aaPredicted RBP18.73■□□□□ 0.59
CCNC-213ENST00000523541 C7orf25Q9BPX7 421 aa18.73■□□□□ 0.59
CCNC-213ENST00000523541 TRIM9Q9C026 710 aa18.73■□□□□ 0.59
CCNC-213ENST00000523541 PCDHB8Q9UN66 801 aa18.73■□□□□ 0.59
CCNC-213ENST00000523541 POLIQ9UNA4 740 aa18.73■□□□□ 0.59
CCNC-213ENST00000523541 CDY1Q9Y6F8 540 aa18.73■□□□□ 0.59
CCNC-213ENST00000523541 CLUHO75153 1309 aa18.73■□□□□ 0.59
CCNC-213ENST00000523541 TULP1O00294 542 aaPredicted RBP18.72■□□□□ 0.59
CCNC-213ENST00000523541 ABLIM3O94929 683 aa18.72■□□□□ 0.59
CCNC-213ENST00000523541 ADSSP30520 456 aa18.72■□□□□ 0.59
CCNC-213ENST00000523541 MCM4P33991 863 aa18.72■□□□□ 0.59
CCNC-213ENST00000523541 DNM1Q05193 864 aaKnown RBP18.72■□□□□ 0.59
CCNC-213ENST00000523541 PKP1Q13835 747 aa18.72■□□□□ 0.59
CCNC-213ENST00000523541 PPM1LQ5SGD2 360 aa18.72■□□□□ 0.59
CCNC-213ENST00000523541 SYCP3Q8IZU3 236 aa18.72■□□□□ 0.59
CCNC-213ENST00000523541 SPRYD3Q8NCJ5 442 aa18.72■□□□□ 0.59
CCNC-213ENST00000523541 DHX58Q96C10 678 aa18.72■□□□□ 0.59
CCNC-213ENST00000523541 KCNH6Q9H252 994 aa18.72■□□□□ 0.59
CCNC-213ENST00000523541 IGSF9Q9P2J2 1179 aa18.72■□□□□ 0.59
CCNC-213ENST00000523541 TUBGCP4Q9UGJ1 667 aa18.72■□□□□ 0.59
CCNC-213ENST00000523541 CITO14578 2027 aa18.72■□□□□ 0.59
CCNC-213ENST00000523541 POLR2DO15514 142 aaKnown RBP18.71■□□□□ 0.59
CCNC-213ENST00000523541 ADAM12O43184 909 aa18.71■□□□□ 0.59
CCNC-213ENST00000523541 OAZ2O95190 189 aa18.71■□□□□ 0.59
CCNC-213ENST00000523541 C8AP07357 584 aa18.71■□□□□ 0.59
CCNC-213ENST00000523541 ACOT2P49753 483 aa18.71■□□□□ 0.59
CCNC-213ENST00000523541 SNRPFP62306 86 aaKnown RBP18.71■□□□□ 0.59
CCNC-213ENST00000523541 BECN1Q14457 450 aa18.71■□□□□ 0.59
CCNC-213ENST00000523541 TMEM132DQ14C87 1099 aa18.71■□□□□ 0.59
CCNC-213ENST00000523541 ZBTB41Q5SVQ8 909 aa18.71■□□□□ 0.59
CCNC-213ENST00000523541 ZNF280DQ6N043 979 aa18.71■□□□□ 0.59
CCNC-213ENST00000523541 GET4Q7L5D6 327 aaPredicted RBP18.71■□□□□ 0.59
CCNC-213ENST00000523541 FBXL6Q8N531 539 aa18.71■□□□□ 0.59
CCNC-213ENST00000523541 MFSD1Q9H3U5 465 aa18.71■□□□□ 0.59
CCNC-213ENST00000523541 EPS15L1Q9UBC2 864 aa18.71■□□□□ 0.59
CCNC-213ENST00000523541 USP25Q9UHP3 1055 aa18.71■□□□□ 0.59
CCNC-213ENST00000523541 TRIP11Q15643 1979 aa18.7■□□□□ 0.58
CCNC-213ENST00000523541 C2orf16Q68DN1 1984 aa18.7■□□□□ 0.58
CCNC-213ENST00000523541 PVALEFA0A1B0GWK0 134 aa18.7■□□□□ 0.58
CCNC-213ENST00000523541 PIRO00625 290 aa18.7■□□□□ 0.58
CCNC-213ENST00000523541 EIF3DO15371 548 aaKnown RBP eCLIP18.7■□□□□ 0.58
CCNC-213ENST00000523541 ATF2P15336 505 aa18.7■□□□□ 0.58
CCNC-213ENST00000523541 TYMPP19971 482 aa18.7■□□□□ 0.58
CCNC-213ENST00000523541 ELF1P32519 619 aa18.7■□□□□ 0.58
CCNC-213ENST00000523541 ARPP19P56211 112 aa18.7■□□□□ 0.58
CCNC-213ENST00000523541 KRT85P78386 507 aa18.7■□□□□ 0.58
CCNC-213ENST00000523541 FOXD4L6Q3SYB3 417 aaPredicted RBP18.7■□□□□ 0.58
CCNC-213ENST00000523541 JADE1Q6IE81 842 aa18.7■□□□□ 0.58
CCNC-213ENST00000523541 CRELD2Q6UXH1 353 aaPredicted RBP18.7■□□□□ 0.58
CCNC-213ENST00000523541 RSPO2Q6UXX9 243 aaPredicted RBP18.7■□□□□ 0.58
CCNC-213ENST00000523541 FOXD4L3Q6VB84 417 aaPredicted RBP18.7■□□□□ 0.58
CCNC-213ENST00000523541 TCEAL8Q8IYN2 117 aa18.7■□□□□ 0.58
CCNC-213ENST00000523541 FAM212AQ96EL1 285 aa18.7■□□□□ 0.58
CCNC-213ENST00000523541 TBC1D7Q9P0N9 293 aa18.7■□□□□ 0.58
CCNC-213ENST00000523541 KCNH3Q9ULD8 1083 aa18.7■□□□□ 0.58
CCNC-213ENST00000523541 MTCL1Q9Y4B5 1905 aaKnown RBP18.7■□□□□ 0.58
CCNC-213ENST00000523541 ANO9A1A5B4 782 aa18.69■□□□□ 0.58
CCNC-213ENST00000523541 CCL16O15467 120 aa18.69■□□□□ 0.58
CCNC-213ENST00000523541 CMA1P23946 247 aa18.69■□□□□ 0.58
CCNC-213ENST00000523541 LILRA4P59901 499 aa18.69■□□□□ 0.58
CCNC-213ENST00000523541 ROR1Q01973 937 aa18.69■□□□□ 0.58
CCNC-213ENST00000523541 YWHAHQ04917 246 aaPredicted RBP18.69■□□□□ 0.58
CCNC-213ENST00000523541 SPAG1Q07617 926 aa18.69■□□□□ 0.58
CCNC-213ENST00000523541 KCNA1Q09470 495 aa18.69■□□□□ 0.58
CCNC-213ENST00000523541 CTXN3Q4LDR2 81 aa18.69■□□□□ 0.58
CCNC-213ENST00000523541 C9orf57Q5W0N0 161 aa18.69■□□□□ 0.58
CCNC-213ENST00000523541 UNC13DQ70J99 1090 aa18.69■□□□□ 0.58
CCNC-213ENST00000523541 USP37Q86T82 979 aa18.69■□□□□ 0.58
CCNC-213ENST00000523541 CEP57L1Q8IYX8 460 aa18.69■□□□□ 0.58
CCNC-213ENST00000523541 SLC7A14Q8TBB6 771 aa18.69■□□□□ 0.58
CCNC-213ENST00000523541 ZNF507Q8TCN5 953 aa18.69■□□□□ 0.58
CCNC-213ENST00000523541 CACTINQ8WUQ7 758 aaKnown RBP18.69■□□□□ 0.58
CCNC-213ENST00000523541 SCAND2PQ9GZW5 306 aaPredicted RBP18.69■□□□□ 0.58
CCNC-213ENST00000523541 SMOC2Q9H3U7 446 aa18.69■□□□□ 0.58
CCNC-213ENST00000523541 KIAA1586Q9HCI6 787 aa18.69■□□□□ 0.58
CCNC-213ENST00000523541 FBXL5Q9UKA1 691 aa18.69■□□□□ 0.58
CCNC-213ENST00000523541 DENND4AQ7Z401 1863 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms