RNA–Protein interactions for RNA: ENST00000523288.5

FAM49B-225, Transcript of family with sequence similarity 49 member B, human

TSL 2

Gene FAM49B, Length 4,552 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM49B-225	ENST00000523288	CHMP2A	O43633	222 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	BUD23	O43709	281 aa	Known RBP	4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	ADAM23	O75077	832 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	TGFB3	P10600	412 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	GNAT2	P19087	354 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	IL4R	P24394	825 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	CTNNA1	P35221	906 aa	Known RBP	4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	CRKL	P46109	303 aa	Known RBP	4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	HSPA13	P48723	471 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	CLK1	P49759	484 aa	Known RBP	4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	FXR1	P51114	621 aa	Known RBP eCLIP	4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	DMPK	Q09013	629 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	ASPH	Q12797	758 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	TGFBI	Q15582	683 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	SUPT20HL1	Q3ZLR7	823 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	ANKDD1A	Q495B1	522 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	TDRD12	Q587J7	1177 aa	Known RBP	4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	FAM133B	Q5BKY9	247 aa	Known RBP	4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	MEI1	Q5TIA1	1274 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	DCDC5	Q6ZRR9	648 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	USP37	Q86T82	979 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	LONP2	Q86WA8	852 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	WDR75	Q8IWA0	830 aa	Known RBP	4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	ARHGAP24	Q8N264	748 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	ADAMTS16	Q8TE57	1224 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	SLC10A4	Q96EP9	437 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	MED15	Q96RN5	788 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	DOK1	Q99704	481 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	ZKSCAN3	Q9BRR0	538 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	UBN1	Q9NPG3	1134 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	NPAP1	Q9NZP6	1156 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	SUCO	Q9UBS9	1254 aa	Known RBP	4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	INTU	Q9ULD6	942 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	ASAP1	Q9ULH1	1129 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	NFU1	Q9UMS0	254 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	CEPT1	Q9Y6K0	416 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	GOLGA8Q	A0A0J9YX86	632 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	GOLGA8O	A6NCC3	632 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	OR5K3	A6NET4	321 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	LGALS16	A8MUM7	142 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	GOLGA8N	F8WBI6	632 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	GOLGA8R	I6L899	631 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	MAPK13	O15264	365 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	CTNND1	O60716	968 aa	Known RBP	4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	SNX2	O60749	519 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	GAS8	O95995	478 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	INHBB	P09529	407 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	GM2A	P17900	193 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	IL32	P24001	234 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	CDC25C	P30307	473 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	NPEPPS	P55786	919 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	MAGOH	P61326	146 aa	Known RBP	4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	ZNF829	Q3KNS6	432 aa	Predicted RBP	4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	WDR45B	Q5MNZ6	344 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	PPP4R4	Q6NUP7	873 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	BRINP3	Q76B58	766 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	MMAA	Q8IVH4	418 aa	Known RBP	4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	ANKRD35	Q8N283	1001 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	SRBD1	Q8N5C6	995 aa	Known RBP	4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	MB21D1	Q8N884	522 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	ANKLE1	Q8NAG6	615 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	USP38	Q8NB14	1042 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	GLG1	Q92896	1179 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	MAGOHB	Q96A72	148 aa	Known RBP	4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	SCYL1	Q96KG9	808 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	CCDC138	Q96M89	665 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	CEP63	Q96MT8	703 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	YME1L1	Q96TA2	773 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	RIOK1	Q9BRS2	568 aa	Known RBP	4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	SLC7A5P2	Q9GIP4	190 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	TBC1D23	Q9NUY8	699 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	KLHL14	Q9P2G3	628 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	PARP2	Q9UGN5	583 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	PCDHGA11	Q9Y5H2	935 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	CD2AP	Q9Y5K6	639 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	CLIC4	Q9Y696	253 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	SSU72P8	A0A1W2PR75	194 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	FAM172BP	A6NC97	362 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	EYA2	O00167	538 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	STK25	O00506	426 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	PPEF1	O14829	653 aa	Predicted RBP	4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	SHOX	O15266	292 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	FGFR1OP	O95684	399 aa	Known RBP	4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	CFB	P00751	764 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	SRGN	P10124	158 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	FUT4	P22083	530 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	CARS	P49589	748 aa	Known RBP	4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	BCAM	P50895	628 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	DNA2	P51530	1060 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	AP3M2	P53677	418 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	MOGS	Q13724	837 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	SQLE	Q14534	574 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	PROSER3	Q2NL68	480 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	TCP11X2	Q5H9J9	407 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	IRAK1BP1	Q5VVH5	260 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	IDO2	Q6ZQW0	420 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	TMC7	Q7Z402	723 aa		4.07	□□□□□ -1.76
FAM49B-225	ENST00000523288	TREML1	Q86YW5	311 aa		4.07	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms