RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 PLPP4Q5VZY2 271 aa7.68□□□□□ -1.18
SDCBP-210ENST00000522843 SND1Q7KZF4 910 aaKnown RBP eCLIP7.68□□□□□ -1.18
SDCBP-210ENST00000522843 ZDHHC14Q8IZN3 488 aa7.68□□□□□ -1.18
SDCBP-210ENST00000522843 MFSD2AQ8NA29 543 aa7.68□□□□□ -1.18
SDCBP-210ENST00000522843 MICAL1Q8TDZ2 1067 aa7.68□□□□□ -1.18
SDCBP-210ENST00000522843 RIN2Q8WYP3 895 aaPredicted RBP7.68□□□□□ -1.18
SDCBP-210ENST00000522843 ZBTB10Q96DT7 871 aa7.68□□□□□ -1.18
SDCBP-210ENST00000522843 NAPBQ9H115 298 aa7.68□□□□□ -1.18
SDCBP-210ENST00000522843 SEMA4AQ9H3S1 761 aa7.68□□□□□ -1.18
SDCBP-210ENST00000522843 MFSD1Q9H3U5 465 aa7.68□□□□□ -1.18
SDCBP-210ENST00000522843 ERVK-5Q9HDB9 667 aa7.68□□□□□ -1.18
SDCBP-210ENST00000522843 SLAMF8Q9P0V8 285 aa7.68□□□□□ -1.18
SDCBP-210ENST00000522843 RCAN3Q9UKA8 241 aa7.68□□□□□ -1.18
SDCBP-210ENST00000522843 PNMA2Q9UL42 364 aa7.68□□□□□ -1.18
SDCBP-210ENST00000522843 CYP8B1Q9UNU6 501 aa7.68□□□□□ -1.18
SDCBP-210ENST00000522843 NR2E1Q9Y466 385 aa7.68□□□□□ -1.18
SDCBP-210ENST00000522843 CACNA1IQ9P0X4 2223 aa7.68□□□□□ -1.18
SDCBP-210ENST00000522843 DENND4AQ7Z401 1863 aa7.67□□□□□ -1.18
SDCBP-210ENST00000522843 FGF18O76093 207 aa7.67□□□□□ -1.18
SDCBP-210ENST00000522843 SLC3A2P08195 630 aaKnown RBP7.67□□□□□ -1.18
SDCBP-210ENST00000522843 MYCLP12524 364 aaPredicted RBP7.67□□□□□ -1.18
SDCBP-210ENST00000522843 HOXA5P20719 270 aa7.67□□□□□ -1.18
SDCBP-210ENST00000522843 GNA15P30679 374 aa7.67□□□□□ -1.18
SDCBP-210ENST00000522843 HSD17B4P51659 736 aa7.67□□□□□ -1.18
SDCBP-210ENST00000522843 LINC00310P59036 64 aa7.67□□□□□ -1.18
SDCBP-210ENST00000522843 GHRHRQ02643 423 aa7.67□□□□□ -1.18
SDCBP-210ENST00000522843 INPP5AQ14642 412 aa7.67□□□□□ -1.18
SDCBP-210ENST00000522843 MARCH8Q5T0T0 291 aa7.67□□□□□ -1.18
SDCBP-210ENST00000522843 VPS53Q5VIR6 699 aa7.67□□□□□ -1.18
SDCBP-210ENST00000522843 TSHZ1Q6ZSZ6 1077 aa7.67□□□□□ -1.18
SDCBP-210ENST00000522843 FTSJ3Q8IY81 847 aaKnown RBP7.67□□□□□ -1.18
SDCBP-210ENST00000522843 SUMF1Q8NBK3 374 aa7.67□□□□□ -1.18
SDCBP-210ENST00000522843 PANK1Q8TE04 598 aa7.67□□□□□ -1.18
SDCBP-210ENST00000522843 RUBCNQ92622 972 aa7.67□□□□□ -1.18
SDCBP-210ENST00000522843 GPR20Q99678 358 aa7.67□□□□□ -1.18
SDCBP-210ENST00000522843 DUSP9Q99956 384 aaKnown RBP7.67□□□□□ -1.18
SDCBP-210ENST00000522843 NACAP1Q9BZK3 213 aa7.67□□□□□ -1.18
SDCBP-210ENST00000522843 MAF1Q9H063 256 aa7.67□□□□□ -1.18
SDCBP-210ENST00000522843 ADAM7Q9H2U9 754 aa7.67□□□□□ -1.18
SDCBP-210ENST00000522843 TMX1Q9H3N1 280 aa7.67□□□□□ -1.18
SDCBP-210ENST00000522843 CWH43Q9H720 699 aa7.67□□□□□ -1.18
SDCBP-210ENST00000522843 TCP11L1Q9NUJ3 509 aa7.67□□□□□ -1.18
SDCBP-210ENST00000522843 ZSWIM5Q9P217 1185 aa7.67□□□□□ -1.18
SDCBP-210ENST00000522843 ANAPC4Q9UJX5 808 aa7.67□□□□□ -1.18
SDCBP-210ENST00000522843 CDY2AQ9Y6F7 541 aa7.67□□□□□ -1.18
SDCBP-210ENST00000522843 ABCB11O95342 1321 aa7.67□□□□□ -1.18
SDCBP-210ENST00000522843 ANKRD11Q6UB99 2663 aaPredicted RBP7.66□□□□□ -1.18
SDCBP-210ENST00000522843 LOXHD1Q8IVV2 1947 aa7.66□□□□□ -1.18
SDCBP-210ENST00000522843 MGEA5O60502 916 aa7.66□□□□□ -1.18
SDCBP-210ENST00000522843 PRPF40AO75400 957 aaKnown RBP7.66□□□□□ -1.18
SDCBP-210ENST00000522843 CBX7O95931 251 aa7.66□□□□□ -1.18
SDCBP-210ENST00000522843 ADRB1P08588 477 aa7.66□□□□□ -1.18
SDCBP-210ENST00000522843 SRFP11831 508 aa7.66□□□□□ -1.18
SDCBP-210ENST00000522843 HOXB8P17481 243 aaPredicted RBP7.66□□□□□ -1.18
SDCBP-210ENST00000522843 EIF4BP23588 611 aaKnown RBP7.66□□□□□ -1.18
SDCBP-210ENST00000522843 PGM5Q15124 567 aa7.66□□□□□ -1.18
SDCBP-210ENST00000522843 QRICH1Q2TAL8 776 aa7.66□□□□□ -1.18
SDCBP-210ENST00000522843 ZNF746Q6NUN9 644 aaPredicted RBP7.66□□□□□ -1.18
SDCBP-210ENST00000522843 ADGRF4Q8IZF3 695 aa7.66□□□□□ -1.18
SDCBP-210ENST00000522843 C12orf76Q8N812 135 aaPredicted RBP7.66□□□□□ -1.18
SDCBP-210ENST00000522843 COLGALT1Q8NBJ5 622 aa7.66□□□□□ -1.18
SDCBP-210ENST00000522843 RIN3Q8TB24 985 aa7.66□□□□□ -1.18
SDCBP-210ENST00000522843 DNAJB3Q8WWF6 145 aa7.66□□□□□ -1.18
SDCBP-210ENST00000522843 C20orf173Q96LM9 149 aa7.66□□□□□ -1.18
SDCBP-210ENST00000522843 FRMD6Q96NE9 622 aa7.66□□□□□ -1.18
SDCBP-210ENST00000522843 FBRSQ9HAH7 460 aa7.66□□□□□ -1.18
SDCBP-210ENST00000522843 MLXIPQ9HAP2 919 aa7.66□□□□□ -1.18
SDCBP-210ENST00000522843 ECHDC1Q9NTX5 307 aa7.66□□□□□ -1.18
SDCBP-210ENST00000522843 DLGAP2Q9P1A6 1054 aa7.66□□□□□ -1.18
SDCBP-210ENST00000522843 HCFC2Q9Y5Z7 792 aa7.66□□□□□ -1.18
SDCBP-210ENST00000522843 AK5Q9Y6K8 562 aa7.66□□□□□ -1.18
SDCBP-210ENST00000522843 KAT6AQ92794 2004 aa7.66□□□□□ -1.18
SDCBP-210ENST00000522843 FRYQ5TBA9 3013 aa7.65□□□□□ -1.18
SDCBP-210ENST00000522843 SPEGQ15772 3267 aa7.65□□□□□ -1.18
SDCBP-210ENST00000522843 MBLAC1A4D2B0 266 aaPredicted RBP7.65□□□□□ -1.18
SDCBP-210ENST00000522843 NARSO43776 548 aaKnown RBP7.65□□□□□ -1.18
SDCBP-210ENST00000522843 PPP1R11O60927 126 aaPredicted RBP7.65□□□□□ -1.18
SDCBP-210ENST00000522843 CFBP00751 764 aa7.65□□□□□ -1.18
SDCBP-210ENST00000522843 ZFYP08048 801 aaPredicted RBP7.65□□□□□ -1.18
SDCBP-210ENST00000522843 SP9P0CG40 484 aa7.65□□□□□ -1.18
SDCBP-210ENST00000522843 HSPD1P10809 573 aaKnown RBP7.65□□□□□ -1.18
SDCBP-210ENST00000522843 GNAT1P11488 350 aa7.65□□□□□ -1.18
SDCBP-210ENST00000522843 SCG2P13521 617 aa7.65□□□□□ -1.18
SDCBP-210ENST00000522843 RALGPS1Q5JS13 557 aa7.65□□□□□ -1.18
SDCBP-210ENST00000522843 FAM102BQ5T8I3 360 aa7.65□□□□□ -1.18
SDCBP-210ENST00000522843 UTP14CQ5TAP6 766 aaKnown RBP7.65□□□□□ -1.18
SDCBP-210ENST00000522843 KCNV1Q6PIU1 500 aa7.65□□□□□ -1.18
SDCBP-210ENST00000522843 CCDC171Q6TFL3 1326 aa7.65□□□□□ -1.18
SDCBP-210ENST00000522843 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.65□□□□□ -1.18
SDCBP-210ENST00000522843 STOX1Q6ZVD7 989 aa7.65□□□□□ -1.18
SDCBP-210ENST00000522843 SV2BQ7L1I2 683 aa7.65□□□□□ -1.18
SDCBP-210ENST00000522843 MCF2L2Q86YR7 1114 aa7.65□□□□□ -1.18
SDCBP-210ENST00000522843 MAML2Q8IZL2 1156 aaPredicted RBP7.65□□□□□ -1.18
SDCBP-210ENST00000522843 TDRD5Q8NAT2 981 aaKnown RBP7.65□□□□□ -1.18
SDCBP-210ENST00000522843 NECTIN4Q96NY8 510 aa7.65□□□□□ -1.18
SDCBP-210ENST00000522843 TCF25Q9BQ70 676 aa7.65□□□□□ -1.18
SDCBP-210ENST00000522843 RTP3Q9BQQ7 232 aa7.65□□□□□ -1.18
SDCBP-210ENST00000522843 WNT10AQ9GZT5 417 aa7.65□□□□□ -1.18
SDCBP-210ENST00000522843 TYW1Q9NV66 732 aaKnown RBP7.65□□□□□ -1.18
SDCBP-210ENST00000522843 TMEM260Q9NX78 707 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms