RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 S1PR5Q9H228 398 aa7.01□□□□□ -1.29
PABPC1-220ENST00000522658 CWH43Q9H720 699 aa7.01□□□□□ -1.29
PABPC1-220ENST00000522658 CYP4F12Q9HCS2 524 aa7.01□□□□□ -1.29
PABPC1-220ENST00000522658 ANO2Q9NQ90 1003 aa7.01□□□□□ -1.29
PABPC1-220ENST00000522658 CYP26B1Q9NR63 512 aa7.01□□□□□ -1.29
PABPC1-220ENST00000522658 NRBP2Q9NSY0 501 aa7.01□□□□□ -1.29
PABPC1-220ENST00000522658 GABBR1Q9UBS5 961 aa7.01□□□□□ -1.29
PABPC1-220ENST00000522658 USTQ9Y2C2 406 aa7.01□□□□□ -1.29
PABPC1-220ENST00000522658 INPP5FQ9Y2H2 1132 aa7.01□□□□□ -1.29
PABPC1-220ENST00000522658 MYO7AQ13402 2215 aa7□□□□□ -1.29
PABPC1-220ENST00000522658 CCDC196A0A1B0GTZ2 297 aa7□□□□□ -1.29
PABPC1-220ENST00000522658 SGSM2O43147 1006 aa7□□□□□ -1.29
PABPC1-220ENST00000522658 CHMP2AO43633 222 aa7□□□□□ -1.29
PABPC1-220ENST00000522658 URODP06132 367 aa7□□□□□ -1.29
PABPC1-220ENST00000522658 WEE2P0C1S8 567 aa7□□□□□ -1.29
PABPC1-220ENST00000522658 EDN3P14138 238 aa7□□□□□ -1.29
PABPC1-220ENST00000522658 GSPT1P15170 499 aaKnown RBP7□□□□□ -1.29
PABPC1-220ENST00000522658 FOSL1P15407 271 aa7□□□□□ -1.29
PABPC1-220ENST00000522658 EIF4BP23588 611 aaKnown RBP7□□□□□ -1.29
PABPC1-220ENST00000522658 KLRC2P26717 231 aa7□□□□□ -1.29
PABPC1-220ENST00000522658 GNA11P29992 359 aa7□□□□□ -1.29
PABPC1-220ENST00000522658 GBP2P32456 591 aaPredicted RBP7□□□□□ -1.29
PABPC1-220ENST00000522658 RAB27AP51159 221 aa7□□□□□ -1.29
PABPC1-220ENST00000522658 BCAR1P56945 870 aa7□□□□□ -1.29
PABPC1-220ENST00000522658 CDC42EP1Q00587 391 aa7□□□□□ -1.29
PABPC1-220ENST00000522658 PRKCEQ02156 737 aa7□□□□□ -1.29
PABPC1-220ENST00000522658 CPSF6Q16630 551 aaKnown RBP eCLIP7□□□□□ -1.29
PABPC1-220ENST00000522658 EXOSC6Q5RKV6 272 aaKnown RBP7□□□□□ -1.29
PABPC1-220ENST00000522658 JAKMIP3Q5VZ66 844 aa7□□□□□ -1.29
PABPC1-220ENST00000522658 ALKBH2Q6NS38 261 aa7□□□□□ -1.29
PABPC1-220ENST00000522658 CDPF1Q6NVV7 123 aa7□□□□□ -1.29
PABPC1-220ENST00000522658 ABHD15Q6UXT9 468 aa7□□□□□ -1.29
PABPC1-220ENST00000522658 TMC5Q6UXY8 1006 aa7□□□□□ -1.29
PABPC1-220ENST00000522658 REXO1Q8N1G1 1221 aaKnown RBP7□□□□□ -1.29
PABPC1-220ENST00000522658 SLC39A11Q8N1S5 342 aa7□□□□□ -1.29
PABPC1-220ENST00000522658 TMEM105Q8N8V8 129 aa7□□□□□ -1.29
PABPC1-220ENST00000522658 MRPL43Q8N983 215 aaKnown RBP7□□□□□ -1.29
PABPC1-220ENST00000522658 CCDC148Q8NFR7 591 aa7□□□□□ -1.29
PABPC1-220ENST00000522658 CYP2W1Q8TAV3 490 aa7□□□□□ -1.29
PABPC1-220ENST00000522658 BICD2Q8TD16 824 aa7□□□□□ -1.29
PABPC1-220ENST00000522658 SNX29Q8TEQ0 813 aa7□□□□□ -1.29
PABPC1-220ENST00000522658 TMEM40Q8WWA1 233 aa7□□□□□ -1.29
PABPC1-220ENST00000522658 PGBD4Q96DM1 585 aa7□□□□□ -1.29
PABPC1-220ENST00000522658 JPH2Q9BR39 696 aaPredicted RBP7□□□□□ -1.29
PABPC1-220ENST00000522658 LRRC2Q9BYS8 371 aa7□□□□□ -1.29
PABPC1-220ENST00000522658 IL25Q9H293 177 aa7□□□□□ -1.29
PABPC1-220ENST00000522658 C6orf50Q9HD87 102 aa7□□□□□ -1.29
PABPC1-220ENST00000522658 FOXD3Q9UJU5 478 aaPredicted RBP7□□□□□ -1.29
PABPC1-220ENST00000522658 PIN4Q9Y237 131 aaKnown RBP7□□□□□ -1.29
PABPC1-220ENST00000522658 PCDHA10Q9Y5I2 948 aa7□□□□□ -1.29
PABPC1-220ENST00000522658 FNDC1Q4ZHG4 1894 aaPredicted RBP7□□□□□ -1.29
PABPC1-220ENST00000522658 C2orf71A6NGG8 1288 aa6.99□□□□□ -1.29
PABPC1-220ENST00000522658 NT5C1B-RDH14C9J2C7 533 aa6.99□□□□□ -1.29
PABPC1-220ENST00000522658 GAS7O60861 476 aa6.99□□□□□ -1.29
PABPC1-220ENST00000522658 CLASP2O75122 1294 aaKnown RBP6.99□□□□□ -1.29
PABPC1-220ENST00000522658 PHACTR2O75167 634 aa6.99□□□□□ -1.29
PABPC1-220ENST00000522658 GPR32O75388 356 aa6.99□□□□□ -1.29
PABPC1-220ENST00000522658 IGHDP01880 384 aa6.99□□□□□ -1.29
PABPC1-220ENST00000522658 LMNAP02545 664 aaKnown RBP6.99□□□□□ -1.29
PABPC1-220ENST00000522658 PRNPP04156 253 aa6.99□□□□□ -1.29
PABPC1-220ENST00000522658 SSBP05455 408 aaKnown RBP eCLIP6.99□□□□□ -1.29
PABPC1-220ENST00000522658 DRD2P14416 443 aa6.99□□□□□ -1.29
PABPC1-220ENST00000522658 SFNP31947 248 aa6.99□□□□□ -1.29
PABPC1-220ENST00000522658 JAK3P52333 1124 aa6.99□□□□□ -1.29
PABPC1-220ENST00000522658 POLGP54098 1239 aaPredicted RBP6.99□□□□□ -1.29
PABPC1-220ENST00000522658 TDGQ13569 410 aa6.99□□□□□ -1.29
PABPC1-220ENST00000522658 ANGPT1Q15389 498 aa6.99□□□□□ -1.29
PABPC1-220ENST00000522658 PRR16Q569H4 304 aa6.99□□□□□ -1.29
PABPC1-220ENST00000522658 APOA5Q6Q788 366 aa6.99□□□□□ -1.29
PABPC1-220ENST00000522658 CATSPER4Q7RTX7 472 aa6.99□□□□□ -1.29
PABPC1-220ENST00000522658 DGLUCYQ7Z3D6 616 aa6.99□□□□□ -1.29
PABPC1-220ENST00000522658 C12orf76Q8N812 135 aaPredicted RBP6.99□□□□□ -1.29
PABPC1-220ENST00000522658 TTC16Q8NEE8 873 aa6.99□□□□□ -1.29
PABPC1-220ENST00000522658 EZH1Q92800 747 aaPredicted RBP6.99□□□□□ -1.29
PABPC1-220ENST00000522658 MAP4K1Q92918 833 aa6.99□□□□□ -1.29
PABPC1-220ENST00000522658 SECISBP2LQ93073 1101 aaKnown RBP6.99□□□□□ -1.29
PABPC1-220ENST00000522658 ZNF668Q96K58 619 aaPredicted RBP6.99□□□□□ -1.29
PABPC1-220ENST00000522658 TEKT3Q9BXF9 490 aa6.99□□□□□ -1.29
PABPC1-220ENST00000522658 ZBP1Q9H171 429 aa6.99□□□□□ -1.29
PABPC1-220ENST00000522658 SEMA4AQ9H3S1 761 aa6.99□□□□□ -1.29
PABPC1-220ENST00000522658 PIDD1Q9HB75 910 aa6.99□□□□□ -1.29
PABPC1-220ENST00000522658 MRPL17Q9NRX2 175 aaKnown RBP6.99□□□□□ -1.29
PABPC1-220ENST00000522658 BARHL2Q9NY43 387 aa6.99□□□□□ -1.29
PABPC1-220ENST00000522658 DUSP12Q9UNI6 340 aa6.99□□□□□ -1.29
PABPC1-220ENST00000522658 SSX2IPQ9Y2D8 614 aa6.99□□□□□ -1.29
PABPC1-220ENST00000522658 LOXHD1Q8IVV2 1947 aa6.98□□□□□ -1.29
PABPC1-220ENST00000522658 IGKV6D-21A0A0A0MT36 114 aa6.98□□□□□ -1.29
PABPC1-220ENST00000522658 A0A0U1RQF3 1178 aa6.98□□□□□ -1.29
PABPC1-220ENST00000522658 KLF18A0A0U1RQI7 1052 aa6.98□□□□□ -1.29
PABPC1-220ENST00000522658 FAM95CA0A1B0GW59 222 aa6.98□□□□□ -1.29
PABPC1-220ENST00000522658 MEIS1O00470 390 aa6.98□□□□□ -1.29
PABPC1-220ENST00000522658 SLC27A2O14975 620 aa6.98□□□□□ -1.29
PABPC1-220ENST00000522658 CCNE2O96020 404 aa6.98□□□□□ -1.29
PABPC1-220ENST00000522658 CTSAP10619 480 aa6.98□□□□□ -1.29
PABPC1-220ENST00000522658 DARSP14868 501 aaKnown RBP6.98□□□□□ -1.29
PABPC1-220ENST00000522658 EPCAMP16422 314 aa6.98□□□□□ -1.29
PABPC1-220ENST00000522658 AOC1P19801 751 aa6.98□□□□□ -1.29
PABPC1-220ENST00000522658 FGFR4P22455 802 aa6.98□□□□□ -1.29
PABPC1-220ENST00000522658 GPC3P51654 580 aa6.98□□□□□ -1.29
PABPC1-220ENST00000522658 AK2P54819 239 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms