RNA–Protein interactions for RNA: ENST00000522222.5

SPIDR-218, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-218ENST00000522222 CUEDC2Q9H467 287 aa7.39□□□□□ -1.23
SPIDR-218ENST00000522222 IGFLR1Q9H665 355 aa7.39□□□□□ -1.23
SPIDR-218ENST00000522222 TLE6Q9H808 572 aa7.39□□□□□ -1.23
SPIDR-218ENST00000522222 MAGEF1Q9HAY2 307 aa7.39□□□□□ -1.23
SPIDR-218ENST00000522222 NGRNQ9NPE2 291 aaKnown RBP7.39□□□□□ -1.23
SPIDR-218ENST00000522222 FANCLQ9NW38 375 aa7.39□□□□□ -1.23
SPIDR-218ENST00000522222 TBC1D7Q9P0N9 293 aa7.39□□□□□ -1.23
SPIDR-218ENST00000522222 MYO1AQ9UBC5 1043 aa7.39□□□□□ -1.23
SPIDR-218ENST00000522222 SEL1LQ9UBV2 794 aa7.39□□□□□ -1.23
SPIDR-218ENST00000522222 KCNG1Q9UIX4 513 aa7.39□□□□□ -1.23
SPIDR-218ENST00000522222 TBX20Q9UMR3 447 aa7.39□□□□□ -1.23
SPIDR-218ENST00000522222 FAN1Q9Y2M0 1017 aa7.39□□□□□ -1.23
SPIDR-218ENST00000522222 PPP2R2CQ9Y2T4 447 aa7.39□□□□□ -1.23
SPIDR-218ENST00000522222 NFE2L3Q9Y4A8 694 aa7.39□□□□□ -1.23
SPIDR-218ENST00000522222 CITO14578 2027 aa7.39□□□□□ -1.23
SPIDR-218ENST00000522222 PDCD11Q14690 1871 aaKnown RBP7.38□□□□□ -1.23
SPIDR-218ENST00000522222 SPTBN5Q9NRC6 3674 aaKnown RBP7.38□□□□□ -1.23
SPIDR-218ENST00000522222 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.38□□□□□ -1.23
SPIDR-218ENST00000522222 C2orf71A6NGG8 1288 aa7.38□□□□□ -1.23
SPIDR-218ENST00000522222 AKR1B15C9JRZ8 316 aaPredicted RBP7.38□□□□□ -1.23
SPIDR-218ENST00000522222 PER2O15055 1255 aa7.38□□□□□ -1.23
SPIDR-218ENST00000522222 CLDN3O15551 220 aa7.38□□□□□ -1.23
SPIDR-218ENST00000522222 MAP3K13O43283 966 aa7.38□□□□□ -1.23
SPIDR-218ENST00000522222 NCK2O43639 380 aa7.38□□□□□ -1.23
SPIDR-218ENST00000522222 FAM189A1O60320 539 aa7.38□□□□□ -1.23
SPIDR-218ENST00000522222 KIF4AO95239 1232 aa7.38□□□□□ -1.23
SPIDR-218ENST00000522222 URODP06132 367 aa7.38□□□□□ -1.23
SPIDR-218ENST00000522222 THP07101 528 aa7.38□□□□□ -1.23
SPIDR-218ENST00000522222 CXCL8P10145 99 aa7.38□□□□□ -1.23
SPIDR-218ENST00000522222 MYBP10242 640 aa7.38□□□□□ -1.23
SPIDR-218ENST00000522222 CTSAP10619 480 aa7.38□□□□□ -1.23
SPIDR-218ENST00000522222 ATP1A3P13637 1013 aa7.38□□□□□ -1.23
SPIDR-218ENST00000522222 SCP2P22307 547 aa7.38□□□□□ -1.23
SPIDR-218ENST00000522222 CA8P35219 290 aa7.38□□□□□ -1.23
SPIDR-218ENST00000522222 LTBRP36941 435 aa7.38□□□□□ -1.23
SPIDR-218ENST00000522222 MATR3P43243 847 aaKnown RBP eCLIP7.38□□□□□ -1.232e-8■■■■■ 27.6
SPIDR-218ENST00000522222 NDUFV1P49821 464 aa7.38□□□□□ -1.23
SPIDR-218ENST00000522222 YARSP54577 528 aaKnown RBP7.38□□□□□ -1.23
SPIDR-218ENST00000522222 ASIC1P78348 528 aa7.38□□□□□ -1.23
SPIDR-218ENST00000522222 GTF2BQ00403 316 aa7.38□□□□□ -1.23
SPIDR-218ENST00000522222 DLX2Q07687 328 aaPredicted RBP7.38□□□□□ -1.23
SPIDR-218ENST00000522222 COASYQ13057 564 aa7.38□□□□□ -1.23
SPIDR-218ENST00000522222 GPS2Q13227 327 aa7.38□□□□□ -1.23
SPIDR-218ENST00000522222 ELF2Q15723 593 aa7.38□□□□□ -1.23
SPIDR-218ENST00000522222 LEXMQ3ZCV2 418 aa7.38□□□□□ -1.23
SPIDR-218ENST00000522222 ZBTB41Q5SVQ8 909 aa7.38□□□□□ -1.23
SPIDR-218ENST00000522222 FUT10Q6P4F1 479 aa7.38□□□□□ -1.23
SPIDR-218ENST00000522222 RNF168Q8IYW5 571 aaPredicted RBP7.38□□□□□ -1.23
SPIDR-218ENST00000522222 CEP112Q8N8E3 955 aa7.38□□□□□ -1.23
SPIDR-218ENST00000522222 ADAMTS19Q8TE59 1207 aa7.38□□□□□ -1.23
SPIDR-218ENST00000522222 HASPINQ8TF76 798 aa7.38□□□□□ -1.23
SPIDR-218ENST00000522222 TSC1Q92574 1164 aa7.38□□□□□ -1.23
SPIDR-218ENST00000522222 CCDC47Q96A33 483 aaKnown RBP7.38□□□□□ -1.23
SPIDR-218ENST00000522222 HVCN1Q96D96 273 aa7.38□□□□□ -1.23
SPIDR-218ENST00000522222 NECAB3Q96P71 396 aaPredicted RBP7.38□□□□□ -1.23
SPIDR-218ENST00000522222 PPP1R10Q96QC0 940 aaKnown RBP7.38□□□□□ -1.23
SPIDR-218ENST00000522222 CDCA3Q99618 268 aaPredicted RBP7.38□□□□□ -1.23
SPIDR-218ENST00000522222 COL25A1Q9BXS0 654 aaPredicted RBP7.38□□□□□ -1.23
SPIDR-218ENST00000522222 TRIM9Q9C026 710 aa7.38□□□□□ -1.23
SPIDR-218ENST00000522222 IKZF4Q9H2S9 585 aa7.38□□□□□ -1.23
SPIDR-218ENST00000522222 ST6GALNAC4Q9H4F1 302 aa7.38□□□□□ -1.23
SPIDR-218ENST00000522222 MRPL44Q9H9J2 332 aaKnown RBP7.38□□□□□ -1.23
SPIDR-218ENST00000522222 GOLGA2P5Q9HBQ8 144 aa7.38□□□□□ -1.23
SPIDR-218ENST00000522222 OLFML3Q9NRN5 406 aa7.38□□□□□ -1.23
SPIDR-218ENST00000522222 TOPORSQ9NS56 1045 aaPredicted RBP7.38□□□□□ -1.23
SPIDR-218ENST00000522222 PANK4Q9NVE7 773 aa7.38□□□□□ -1.23
SPIDR-218ENST00000522222 KBTBD4Q9NVX7 518 aa7.38□□□□□ -1.23
SPIDR-218ENST00000522222 FAM53CQ9NYF3 392 aa7.38□□□□□ -1.23
SPIDR-218ENST00000522222 CNTN3Q9P232 1028 aa7.38□□□□□ -1.23
SPIDR-218ENST00000522222 SERTAD1Q9UHV2 236 aa7.38□□□□□ -1.23
SPIDR-218ENST00000522222 BARX2Q9UMQ3 279 aaPredicted RBP7.38□□□□□ -1.23
SPIDR-218ENST00000522222 XIRP2A4UGR9 3374 aa7.37□□□□□ -1.23
SPIDR-218ENST00000522222 VCANP13611 3396 aa7.37□□□□□ -1.23
SPIDR-218ENST00000522222 TRIP11Q15643 1979 aa7.37□□□□□ -1.23
SPIDR-218ENST00000522222 SF3B1O75533 1304 aaKnown RBP eCLIP7.37□□□□□ -1.233e-8■■■■■ 80.3
SPIDR-218ENST00000522222 A0A0B4J269 797 aa7.37□□□□□ -1.23
SPIDR-218ENST00000522222 SMIM28A0A1B0GU29 152 aa7.37□□□□□ -1.23
SPIDR-218ENST00000522222 ANKRD63C9JTQ0 380 aa7.37□□□□□ -1.23
SPIDR-218ENST00000522222 OGTO15294 1046 aa7.37□□□□□ -1.23
SPIDR-218ENST00000522222 KIF5CO60282 957 aa7.37□□□□□ -1.23
SPIDR-218ENST00000522222 CLASP2O75122 1294 aaKnown RBP7.37□□□□□ -1.23
SPIDR-218ENST00000522222 GCNT3O95395 438 aa7.37□□□□□ -1.23
SPIDR-218ENST00000522222 EFEMP2O95967 443 aa7.37□□□□□ -1.23
SPIDR-218ENST00000522222 SOD2P04179 222 aa7.37□□□□□ -1.23
SPIDR-218ENST00000522222 ALDH2P05091 517 aa7.37□□□□□ -1.23
SPIDR-218ENST00000522222 CLTAP09496 248 aa7.37□□□□□ -1.23
SPIDR-218ENST00000522222 BMP1P13497 986 aa7.37□□□□□ -1.23
SPIDR-218ENST00000522222 KCNE1P15382 129 aa7.37□□□□□ -1.23
SPIDR-218ENST00000522222 CASP1P29466 404 aa7.37□□□□□ -1.23
SPIDR-218ENST00000522222 ABCD1P33897 745 aa7.37□□□□□ -1.23
SPIDR-218ENST00000522222 TNFSF9P41273 254 aa7.37□□□□□ -1.23
SPIDR-218ENST00000522222 GLUD2P49448 558 aa7.37□□□□□ -1.23
SPIDR-218ENST00000522222 SOX4Q06945 474 aaPredicted RBP7.37□□□□□ -1.23
SPIDR-218ENST00000522222 KCNA1Q09470 495 aa7.37□□□□□ -1.23
SPIDR-218ENST00000522222 ADAM15Q13444 863 aa7.37□□□□□ -1.23
SPIDR-218ENST00000522222 SMAD4Q13485 552 aaKnown RBP7.37□□□□□ -1.23
SPIDR-218ENST00000522222 STIM1Q13586 685 aa7.37□□□□□ -1.23
SPIDR-218ENST00000522222 NR1I3Q14994 352 aa7.37□□□□□ -1.23
SPIDR-218ENST00000522222 SLC10A6Q3KNW5 377 aa7.37□□□□□ -1.23
SPIDR-218ENST00000522222 KMT5BQ4FZB7 885 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms