RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 C9orf57Q5W0N0 161 aa14.41□□□□□ -0.1
CLK4-210ENST00000522136 GPIHBP1Q8IV16 184 aa14.41□□□□□ -0.1
CLK4-210ENST00000522136 ABI1Q8IZP0 508 aa14.41□□□□□ -0.1
CLK4-210ENST00000522136 TOP1MTQ969P6 601 aa14.41□□□□□ -0.1
CLK4-210ENST00000522136 TSPAN18Q96SJ8 248 aa14.41□□□□□ -0.1
CLK4-210ENST00000522136 UBE2TQ9NPD8 197 aaPredicted RBP14.41□□□□□ -0.1
CLK4-210ENST00000522136 CXXC1Q9P0U4 656 aaPredicted RBP14.41□□□□□ -0.1
CLK4-210ENST00000522136 NUB1Q9Y5A7 615 aa14.41□□□□□ -0.1
CLK4-210ENST00000522136 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.41□□□□□ -0.11e-7■□□□□ 8.8
CLK4-210ENST00000522136 ANO9A1A5B4 782 aa14.4□□□□□ -0.1
CLK4-210ENST00000522136 TBKBP1A7MCY6 615 aa14.4□□□□□ -0.1
CLK4-210ENST00000522136 XPOTO43592 962 aaKnown RBP14.4□□□□□ -0.1
CLK4-210ENST00000522136 BAIAP3O94812 1187 aa14.4□□□□□ -0.1
CLK4-210ENST00000522136 ASS1P00966 412 aaKnown RBP14.4□□□□□ -0.1
CLK4-210ENST00000522136 AMHP03971 560 aa14.4□□□□□ -0.1
CLK4-210ENST00000522136 CYP3A5P20815 502 aa14.4□□□□□ -0.1
CLK4-210ENST00000522136 ADKP55263 362 aaKnown RBP14.4□□□□□ -0.1
CLK4-210ENST00000522136 NOP14P78316 857 aaKnown RBP14.4□□□□□ -0.1
CLK4-210ENST00000522136 GRIK3Q13003 919 aa14.4□□□□□ -0.1
CLK4-210ENST00000522136 PAN2Q504Q3 1202 aaKnown RBP14.4□□□□□ -0.1
CLK4-210ENST00000522136 WDR44Q5JSH3 913 aa14.4□□□□□ -0.1
CLK4-210ENST00000522136 IQCEQ6IPM2 695 aa14.4□□□□□ -0.1
CLK4-210ENST00000522136 PPFIBP1Q86W92 1011 aa14.4□□□□□ -0.1
CLK4-210ENST00000522136 URGCPQ8TCY9 931 aa14.4□□□□□ -0.1
CLK4-210ENST00000522136 HPDLQ96IR7 371 aa14.4□□□□□ -0.1
CLK4-210ENST00000522136 NT5C1BQ96P26 610 aa14.4□□□□□ -0.1
CLK4-210ENST00000522136 PPP1R9BQ96SB3 815 aa14.4□□□□□ -0.1
CLK4-210ENST00000522136 SLC38A7Q9NVC3 462 aa14.4□□□□□ -0.1
CLK4-210ENST00000522136 TBC1D13Q9NVG8 400 aa14.4□□□□□ -0.1
CLK4-210ENST00000522136 APEX2Q9UBZ4 518 aa14.4□□□□□ -0.1
CLK4-210ENST00000522136 DNAJC12Q9UKB3 198 aa14.4□□□□□ -0.1
CLK4-210ENST00000522136 EFCAB14O75071 495 aa14.4□□□□□ -0.1
CLK4-210ENST00000522136 KCNJ6P48051 423 aa14.4□□□□□ -0.1
CLK4-210ENST00000522136 CLCNKBP51801 687 aa14.4□□□□□ -0.1
CLK4-210ENST00000522136 CCDC173Q0VFZ6 552 aa14.4□□□□□ -0.1
CLK4-210ENST00000522136 SGSM1Q2NKQ1 1148 aa14.4□□□□□ -0.1
CLK4-210ENST00000522136 ZNF699Q32M78 642 aa14.4□□□□□ -0.1
CLK4-210ENST00000522136 PPM1KQ8N3J5 372 aa14.4□□□□□ -0.1
CLK4-210ENST00000522136 ARID3AQ99856 593 aa14.4□□□□□ -0.1
CLK4-210ENST00000522136 NUP58Q9BVL2 599 aa14.4□□□□□ -0.1
CLK4-210ENST00000522136 POLIQ9UNA4 740 aa14.4□□□□□ -0.1
CLK4-210ENST00000522136 PIRO00625 290 aa14.39□□□□□ -0.11
CLK4-210ENST00000522136 DGKIO75912 1065 aa14.39□□□□□ -0.11
CLK4-210ENST00000522136 LRPAP1P30533 357 aa14.39□□□□□ -0.11
CLK4-210ENST00000522136 RNASELQ05823 741 aaKnown RBP14.39□□□□□ -0.11
CLK4-210ENST00000522136 RAPGEF1Q13905 1077 aa14.39□□□□□ -0.11
CLK4-210ENST00000522136 ARHGAP44Q17R89 818 aa14.39□□□□□ -0.11
CLK4-210ENST00000522136 FIGNQ5HY92 759 aa14.39□□□□□ -0.11
CLK4-210ENST00000522136 CCDC186Q7Z3E2 898 aa14.39□□□□□ -0.11
CLK4-210ENST00000522136 BAP1Q92560 729 aa14.39□□□□□ -0.11
CLK4-210ENST00000522136 KREMEN1Q96MU8 473 aa14.39□□□□□ -0.11
CLK4-210ENST00000522136 NAA15Q9BXJ9 866 aaKnown RBP14.39□□□□□ -0.11
CLK4-210ENST00000522136 IMPG2Q9BZV3 1241 aa14.39□□□□□ -0.11
CLK4-210ENST00000522136 CEP72Q9P209 647 aa14.39□□□□□ -0.11
CLK4-210ENST00000522136 IMPACTQ9P2X3 320 aa14.39□□□□□ -0.11
CLK4-210ENST00000522136 NXF1Q9UBU9 619 aaKnown RBP14.39□□□□□ -0.11
CLK4-210ENST00000522136 DNAJB4Q9UDY4 337 aa14.39□□□□□ -0.11
CLK4-210ENST00000522136 CAPN11Q9UMQ6 739 aa14.39□□□□□ -0.11
CLK4-210ENST00000522136 R3HCC1Q9Y3T6 440 aaKnown RBP14.39□□□□□ -0.11
CLK4-210ENST00000522136 NR2E3Q9Y5X4 410 aa14.39□□□□□ -0.11
CLK4-210ENST00000522136 COL4A6Q14031 1691 aa14.38□□□□□ -0.11
CLK4-210ENST00000522136 F8W810 466 aa14.38□□□□□ -0.11
CLK4-210ENST00000522136 SPTLC1O15269 473 aa14.38□□□□□ -0.11
CLK4-210ENST00000522136 HOXA2O43364 376 aa14.38□□□□□ -0.11
CLK4-210ENST00000522136 PNMA6AP0CW24 399 aaPredicted RBP14.38□□□□□ -0.11
CLK4-210ENST00000522136 MAGEA10P43363 369 aaPredicted RBP14.38□□□□□ -0.11
CLK4-210ENST00000522136 TUSC3Q13454 348 aa14.38□□□□□ -0.11
CLK4-210ENST00000522136 WDR72Q3MJ13 1102 aa14.38□□□□□ -0.11
CLK4-210ENST00000522136 PSRC1Q6PGN9 363 aaPredicted RBP14.38□□□□□ -0.11
CLK4-210ENST00000522136 SCARA5Q6ZMJ2 495 aa14.38□□□□□ -0.11
CLK4-210ENST00000522136 CACNA2D4Q7Z3S7 1137 aa14.38□□□□□ -0.11
CLK4-210ENST00000522136 NRDE2Q9H7Z3 1164 aa14.38□□□□□ -0.11
CLK4-210ENST00000522136 KANSL3Q9P2N6 904 aa14.38□□□□□ -0.11
CLK4-210ENST00000522136 CEP290O15078 2479 aa14.38□□□□□ -0.11
CLK4-210ENST00000522136 AKR1B15C9JRZ8 316 aaPredicted RBP14.38□□□□□ -0.11
CLK4-210ENST00000522136 PODXLO00592 558 aa14.38□□□□□ -0.11
CLK4-210ENST00000522136 ZC3H11AO75152 810 aaKnown RBP eCLIP14.38□□□□□ -0.11
CLK4-210ENST00000522136 ATICP31939 592 aa14.38□□□□□ -0.11
CLK4-210ENST00000522136 KRT9P35527 623 aa14.38□□□□□ -0.11
CLK4-210ENST00000522136 DSC1Q08554 894 aa14.38□□□□□ -0.11
CLK4-210ENST00000522136 TRIM14Q14142 442 aa14.38□□□□□ -0.11
CLK4-210ENST00000522136 DRAP1Q14919 205 aaPredicted RBP14.38□□□□□ -0.11
CLK4-210ENST00000522136 UPP1Q16831 310 aa14.38□□□□□ -0.11
CLK4-210ENST00000522136 COLGALT2Q8IYK4 626 aa14.38□□□□□ -0.11
CLK4-210ENST00000522136 TC2NQ8N9U0 490 aa14.38□□□□□ -0.11
CLK4-210ENST00000522136 CCDC150Q8NCX0 1101 aa14.38□□□□□ -0.11
CLK4-210ENST00000522136 C3orf58Q8NDZ4 430 aa14.38□□□□□ -0.11
CLK4-210ENST00000522136 HERVK_113Q902F9 699 aa14.38□□□□□ -0.11
CLK4-210ENST00000522136 RNF216Q9NWF9 866 aaPredicted RBP14.38□□□□□ -0.11
CLK4-210ENST00000522136 LUC7L2Q9Y383 392 aaKnown RBP14.38□□□□□ -0.11
CLK4-210ENST00000522136 MFAP3LO75121 409 aa14.37□□□□□ -0.11
CLK4-210ENST00000522136 PTMAP06454 111 aaKnown RBP14.37□□□□□ -0.11
CLK4-210ENST00000522136 ZNF667Q5HYK9 610 aa14.37□□□□□ -0.11
CLK4-210ENST00000522136 LRRC52Q8N7C0 313 aa14.37□□□□□ -0.11
CLK4-210ENST00000522136 HASPINQ8TF76 798 aa14.37□□□□□ -0.11
CLK4-210ENST00000522136 FAM193BQ96PV7 902 aaPredicted RBP14.37□□□□□ -0.11
CLK4-210ENST00000522136 GPR88Q9GZN0 384 aa14.37□□□□□ -0.11
CLK4-210ENST00000522136 A0A1W2PQJ5 194 aa14.36□□□□□ -0.11
CLK4-210ENST00000522136 LRRC53A6NM62 1247 aa14.36□□□□□ -0.11
CLK4-210ENST00000522136 FOXN3O00409 490 aaPredicted RBP14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms