RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 MKNK1Q9BUB5 465 aa10.26□□□□□ -0.77
CLK4-209ENST00000521621 ADAM7Q9H2U9 754 aa10.26□□□□□ -0.77
CLK4-209ENST00000521621 FAM124BQ9H5Z6 455 aaPredicted RBP10.26□□□□□ -0.77
CLK4-209ENST00000521621 VRTNQ9H8Y1 702 aa10.26□□□□□ -0.77
CLK4-209ENST00000521621 GDAP2Q9NXN4 497 aa10.26□□□□□ -0.77
CLK4-209ENST00000521621 PRG3Q9Y2Y8 225 aaPredicted RBP10.26□□□□□ -0.77
CLK4-209ENST00000521621 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.25□□□□□ -0.77
CLK4-209ENST00000521621 CASTOR2A6NHX0 329 aa10.25□□□□□ -0.77
CLK4-209ENST00000521621 CNPP09543 421 aaKnown RBP10.25□□□□□ -0.77
CLK4-209ENST00000521621 CCDC85BQ15834 202 aaPredicted RBP10.25□□□□□ -0.77
CLK4-209ENST00000521621 TPGS2Q68CL5 300 aa10.25□□□□□ -0.77
CLK4-209ENST00000521621 DPH6Q7L8W6 267 aa10.25□□□□□ -0.77
CLK4-209ENST00000521621 TAS1R1Q7RTX1 841 aa10.25□□□□□ -0.77
CLK4-209ENST00000521621 C3orf58Q8NDZ4 430 aa10.25□□□□□ -0.77
CLK4-209ENST00000521621 MICAL1Q8TDZ2 1067 aa10.25□□□□□ -0.77
CLK4-209ENST00000521621 ZNF560Q96MR9 790 aa10.25□□□□□ -0.77
CLK4-209ENST00000521621 PAAF1Q9BRP4 392 aa10.25□□□□□ -0.77
CLK4-209ENST00000521621 CBWD1Q9BRT8 395 aa10.25□□□□□ -0.77
CLK4-209ENST00000521621 RBAKQ9NYW8 714 aaPredicted RBP10.25□□□□□ -0.77
CLK4-209ENST00000521621 ABLIM3O94929 683 aa10.25□□□□□ -0.77
CLK4-209ENST00000521621 PRR29P0C7W0 189 aa10.25□□□□□ -0.77
CLK4-209ENST00000521621 MTHFRP42898 656 aa10.25□□□□□ -0.77
CLK4-209ENST00000521621 KIAA1841Q6NSI8 718 aa10.25□□□□□ -0.77
CLK4-209ENST00000521621 GLIS3Q8NEA6 775 aa10.25□□□□□ -0.77
CLK4-209ENST00000521621 BORCS6Q96GS4 357 aa10.25□□□□□ -0.77
CLK4-209ENST00000521621 CHAMP1Q96JM3 812 aa10.25□□□□□ -0.77
CLK4-209ENST00000521621 POP1Q99575 1024 aaKnown RBP10.25□□□□□ -0.77
CLK4-209ENST00000521621 CGRRF1Q99675 332 aa10.25□□□□□ -0.77
CLK4-209ENST00000521621 CLDND1Q9NY35 253 aa10.25□□□□□ -0.77
CLK4-209ENST00000521621 TUBGCP4Q9UGJ1 667 aa10.25□□□□□ -0.77
CLK4-209ENST00000521621 FBXW11Q9UKB1 542 aa10.25□□□□□ -0.77
CLK4-209ENST00000521621 HCFC2Q9Y5Z7 792 aa10.25□□□□□ -0.77
CLK4-209ENST00000521621 OR6C75A6NL08 312 aa10.24□□□□□ -0.77
CLK4-209ENST00000521621 TEX28O15482 410 aa10.24□□□□□ -0.77
CLK4-209ENST00000521621 B3GAT3O94766 335 aa10.24□□□□□ -0.77
CLK4-209ENST00000521621 ACOT2P49753 483 aa10.24□□□□□ -0.77
CLK4-209ENST00000521621 OSTNP61366 133 aa10.24□□□□□ -0.77
CLK4-209ENST00000521621 CYP24A1Q07973 514 aa10.24□□□□□ -0.77
CLK4-209ENST00000521621 SV2CQ496J9 727 aa10.24□□□□□ -0.77
CLK4-209ENST00000521621 RTP2Q5QGT7 225 aa10.24□□□□□ -0.77
CLK4-209ENST00000521621 GRAMD1CQ8IYS0 662 aa10.24□□□□□ -0.77
CLK4-209ENST00000521621 C2orf15Q8WU43 125 aaKnown RBP10.24□□□□□ -0.77
CLK4-209ENST00000521621 C18orf25Q96B23 403 aaPredicted RBP10.24□□□□□ -0.77
CLK4-209ENST00000521621 CLSTN3Q9BQT9 956 aa10.24□□□□□ -0.77
CLK4-209ENST00000521621 FAM213AQ9BRX8 229 aa10.24□□□□□ -0.77
CLK4-209ENST00000521621 GDPD2Q9HCC8 539 aa10.24□□□□□ -0.77
CLK4-209ENST00000521621 SLC39A2Q9NP94 309 aa10.24□□□□□ -0.77
CLK4-209ENST00000521621 INTS13Q9NVM9 706 aa10.24□□□□□ -0.77
CLK4-209ENST00000521621 DPP3Q9NY33 737 aa10.24□□□□□ -0.77
CLK4-209ENST00000521621 TISP43B9A030 160 aa10.24□□□□□ -0.77
CLK4-209ENST00000521621 IKBKBO14920 756 aa10.24□□□□□ -0.77
CLK4-209ENST00000521621 LINC01565O15544 149 aa10.24□□□□□ -0.77
CLK4-209ENST00000521621 MICAL2O94851 1124 aa10.24□□□□□ -0.77
CLK4-209ENST00000521621 NFICP08651 508 aa10.24□□□□□ -0.77
CLK4-209ENST00000521621 IBSPP21815 317 aaPredicted RBP10.24□□□□□ -0.77
CLK4-209ENST00000521621 ATICP31939 592 aa10.24□□□□□ -0.77
CLK4-209ENST00000521621 PSMD5Q16401 504 aa10.24□□□□□ -0.77
CLK4-209ENST00000521621 SNRNP35Q16560 246 aaKnown RBP10.24□□□□□ -0.77
CLK4-209ENST00000521621 CT47A1Q5JQC4 288 aaPredicted RBP10.24□□□□□ -0.77
CLK4-209ENST00000521621 FAM171A1Q5VUB5 890 aa10.24□□□□□ -0.77
CLK4-209ENST00000521621 CENPPQ6IPU0 288 aa10.24□□□□□ -0.77
CLK4-209ENST00000521621 SYCE2Q6PIF2 218 aa10.24□□□□□ -0.77
CLK4-209ENST00000521621 EFCAB13Q8IY85 973 aa10.24□□□□□ -0.77
CLK4-209ENST00000521621 LOC730098B7Z3J9 87 aa10.23□□□□□ -0.77
CLK4-209ENST00000521621 KINO60870 393 aaKnown RBP10.23□□□□□ -0.77
CLK4-209ENST00000521621 GLUD1P00367 558 aa10.23□□□□□ -0.77
CLK4-209ENST00000521621 RPL13P26373 211 aaKnown RBP10.23□□□□□ -0.77
CLK4-209ENST00000521621 GTF2H1P32780 548 aa10.23□□□□□ -0.77
CLK4-209ENST00000521621 TAF6P49848 677 aa10.23□□□□□ -0.77
CLK4-209ENST00000521621 LILRA4P59901 499 aa10.23□□□□□ -0.77
CLK4-209ENST00000521621 LRRC63Q05C16 580 aa10.23□□□□□ -0.77
CLK4-209ENST00000521621 GLRA4Q5JXX5 417 aa10.23□□□□□ -0.77
CLK4-209ENST00000521621 GPR149Q86SP6 731 aa10.23□□□□□ -0.77
CLK4-209ENST00000521621 USP37Q86T82 979 aa10.23□□□□□ -0.77
CLK4-209ENST00000521621 ADHFE1Q8IWW8 467 aa10.23□□□□□ -0.77
CLK4-209ENST00000521621 TMEM86AQ8N2M4 240 aa10.23□□□□□ -0.77
CLK4-209ENST00000521621 TAF4BQ92750 862 aa10.23□□□□□ -0.77
CLK4-209ENST00000521621 HPS3Q969F9 1004 aa10.23□□□□□ -0.77
CLK4-209ENST00000521621 DHTKD1Q96HY7 919 aaPredicted RBP10.23□□□□□ -0.77
CLK4-209ENST00000521621 CEP295NLQ96MC4 621 aa10.23□□□□□ -0.77
CLK4-209ENST00000521621 RIPOR3Q96MK2 946 aa10.23□□□□□ -0.77
CLK4-209ENST00000521621 PRDM6Q9NQX0 595 aa10.23□□□□□ -0.77
CLK4-209ENST00000521621 USTQ9Y2C2 406 aa10.23□□□□□ -0.77
CLK4-209ENST00000521621 SLC16A3O15427 465 aaKnown RBP10.23□□□□□ -0.77
CLK4-209ENST00000521621 ODC1P11926 461 aa10.23□□□□□ -0.77
CLK4-209ENST00000521621 HARSP12081 509 aaKnown RBP10.23□□□□□ -0.77
CLK4-209ENST00000521621 KLRC2P26717 231 aa10.23□□□□□ -0.77
CLK4-209ENST00000521621 CASP1P29466 404 aa10.23□□□□□ -0.77
CLK4-209ENST00000521621 RBP5P82980 135 aa10.23□□□□□ -0.77
CLK4-209ENST00000521621 DUOXA2Q1HG44 320 aa10.23□□□□□ -0.77
CLK4-209ENST00000521621 PTCRAQ6ISU1 281 aaPredicted RBP10.23□□□□□ -0.77
CLK4-209ENST00000521621 TOP6BLQ8N6T0 577 aa10.23□□□□□ -0.77
CLK4-209ENST00000521621 RIN2Q8WYP3 895 aaPredicted RBP10.23□□□□□ -0.77
CLK4-209ENST00000521621 SMARCE1Q969G3 411 aa10.23□□□□□ -0.77
CLK4-209ENST00000521621 PCDHGC5Q9Y5F6 944 aa10.23□□□□□ -0.77
CLK4-209ENST00000521621 F8W810 466 aa10.22□□□□□ -0.77
CLK4-209ENST00000521621 PMM2O15305 246 aa10.22□□□□□ -0.77
CLK4-209ENST00000521621 ZMYND10O75800 440 aa10.22□□□□□ -0.77
CLK4-209ENST00000521621 MORC3Q14149 939 aa10.22□□□□□ -0.77
CLK4-209ENST00000521621 SEZ6Q53EL9 994 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms