RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 BRSK2Q8IWQ3 736 aa22.4■■□□□ 1.18
TRIM35-203ENST00000521253 NELFCDQ8IXH7 590 aa22.4■■□□□ 1.18
TRIM35-203ENST00000521253 SUSD3Q96L08 255 aa22.4■■□□□ 1.18
TRIM35-203ENST00000521253 MTRRQ9UBK8 725 aa22.4■■□□□ 1.18
TRIM35-203ENST00000521253 PDCD11Q14690 1871 aaKnown RBP22.39■■□□□ 1.18
TRIM35-203ENST00000521253 SPDYE4A6NLX3 237 aa22.39■■□□□ 1.17
TRIM35-203ENST00000521253 PPEF2O14830 753 aa22.39■■□□□ 1.17
TRIM35-203ENST00000521253 SYN3O14994 580 aa22.39■■□□□ 1.17
TRIM35-203ENST00000521253 TGFB1I1O43294 461 aa22.39■■□□□ 1.17
TRIM35-203ENST00000521253 EXTL3O43909 919 aa22.39■■□□□ 1.17
TRIM35-203ENST00000521253 ZNF202O95125 648 aa22.39■■□□□ 1.17
TRIM35-203ENST00000521253 IL18RAPO95256 599 aa22.39■■□□□ 1.17
TRIM35-203ENST00000521253 C1RP00736 705 aa22.39■■□□□ 1.17
TRIM35-203ENST00000521253 WNT7BP56706 349 aa22.39■■□□□ 1.17
TRIM35-203ENST00000521253 STK4Q13043 487 aa22.39■■□□□ 1.17
TRIM35-203ENST00000521253 BMT2Q1RMZ1 405 aa22.39■■□□□ 1.17
TRIM35-203ENST00000521253 KMT5BQ4FZB7 885 aa22.39■■□□□ 1.17
TRIM35-203ENST00000521253 RSPO2Q6UXX9 243 aaPredicted RBP22.39■■□□□ 1.17
TRIM35-203ENST00000521253 KRBA2Q6ZNG9 492 aa22.39■■□□□ 1.17
TRIM35-203ENST00000521253 EFCAB13Q8IY85 973 aa22.39■■□□□ 1.17
TRIM35-203ENST00000521253 NOC3LQ8WTT2 800 aaKnown RBP22.39■■□□□ 1.17
TRIM35-203ENST00000521253 POP1Q99575 1024 aaKnown RBP22.39■■□□□ 1.17
TRIM35-203ENST00000521253 PHF7Q9BWX1 381 aaPredicted RBP22.39■■□□□ 1.17
TRIM35-203ENST00000521253 EXOC1Q9NV70 894 aa22.39■■□□□ 1.17
TRIM35-203ENST00000521253 RBAKQ9NYW8 714 aaPredicted RBP22.39■■□□□ 1.17
TRIM35-203ENST00000521253 DPP7Q9UHL4 492 aa22.39■■□□□ 1.17
TRIM35-203ENST00000521253 CIZ1Q9ULV3 898 aaPredicted RBP22.39■■□□□ 1.17
TRIM35-203ENST00000521253 VWA8A3KMH1 1905 aa22.38■■□□□ 1.17
TRIM35-203ENST00000521253 PRR29P0C7W0 189 aa22.38■■□□□ 1.17
TRIM35-203ENST00000521253 VARS2Q5ST30 1063 aaKnown RBP22.38■■□□□ 1.17
TRIM35-203ENST00000521253 ANKS3Q6ZW76 656 aa22.38■■□□□ 1.17
TRIM35-203ENST00000521253 GPD1LQ8N335 351 aa22.38■■□□□ 1.17
TRIM35-203ENST00000521253 AGPAT3Q9NRZ7 376 aa22.38■■□□□ 1.17
TRIM35-203ENST00000521253 BACE2Q9Y5Z0 518 aa22.38■■□□□ 1.17
TRIM35-203ENST00000521253 GOLGA6L4A6NEF3 574 aa22.37■■□□□ 1.17
TRIM35-203ENST00000521253 TULP1O00294 542 aaPredicted RBP22.37■■□□□ 1.17
TRIM35-203ENST00000521253 KIAA0391O15091 583 aaKnown RBP22.37■■□□□ 1.17
TRIM35-203ENST00000521253 RPN1P04843 607 aaKnown RBP22.37■■□□□ 1.17
TRIM35-203ENST00000521253 OR1D2P34982 312 aa22.37■■□□□ 1.17
TRIM35-203ENST00000521253 MTHFRP42898 656 aa22.37■■□□□ 1.17
TRIM35-203ENST00000521253 AARSP49588 968 aaKnown RBP eCLIP22.37■■□□□ 1.17
TRIM35-203ENST00000521253 ATAT1Q5SQI0 421 aa22.37■■□□□ 1.17
TRIM35-203ENST00000521253 C9orf57Q5W0N0 161 aa22.37■■□□□ 1.17
TRIM35-203ENST00000521253 ELMSAN1Q6PJG2 1045 aa22.37■■□□□ 1.17
TRIM35-203ENST00000521253 GPR149Q86SP6 731 aa22.37■■□□□ 1.17
TRIM35-203ENST00000521253 KIAA0895Q8NCT3 520 aa22.37■■□□□ 1.17
TRIM35-203ENST00000521253 KREMEN2Q8NCW0 462 aa22.37■■□□□ 1.17
TRIM35-203ENST00000521253 HDAC7Q8WUI4 952 aa22.37■■□□□ 1.17
TRIM35-203ENST00000521253 RIPOR3Q96MK2 946 aa22.37■■□□□ 1.17
TRIM35-203ENST00000521253 NECTIN4Q96NY8 510 aa22.37■■□□□ 1.17
TRIM35-203ENST00000521253 PLEKHA4Q9H4M7 779 aa22.37■■□□□ 1.17
TRIM35-203ENST00000521253 DPP3Q9NY33 737 aa22.37■■□□□ 1.17
TRIM35-203ENST00000521253 HSPBP1Q9NZL4 362 aa22.37■■□□□ 1.17
TRIM35-203ENST00000521253 PCDHB8Q9UN66 801 aa22.37■■□□□ 1.17
TRIM35-203ENST00000521253 CDY1Q9Y6F8 540 aa22.37■■□□□ 1.17
TRIM35-203ENST00000521253 M0QZQ0 153 aa22.36■■□□□ 1.17
TRIM35-203ENST00000521253 RFPL2O75678 378 aa22.36■■□□□ 1.17
TRIM35-203ENST00000521253 DPYDQ12882 1025 aa22.36■■□□□ 1.17
TRIM35-203ENST00000521253 PSMD2Q13200 908 aa22.36■■□□□ 1.17
TRIM35-203ENST00000521253 RAB33AQ14088 237 aa22.36■■□□□ 1.17
TRIM35-203ENST00000521253 MRPL58Q14197 206 aaKnown RBP22.36■■□□□ 1.17
TRIM35-203ENST00000521253 KNOP1Q1ED39 458 aaKnown RBP22.36■■□□□ 1.17
TRIM35-203ENST00000521253 CBWD2Q8IUF1 395 aa22.36■■□□□ 1.17
TRIM35-203ENST00000521253 FMR1NBQ8N0W7 255 aaPredicted RBP22.36■■□□□ 1.17
TRIM35-203ENST00000521253 CMASQ8NFW8 434 aaPredicted RBP22.36■■□□□ 1.17
TRIM35-203ENST00000521253 KHSRPQ92945 711 aaKnown RBP eCLIP22.36■■□□□ 1.17
TRIM35-203ENST00000521253 RPGRIP1Q96KN7 1286 aa22.36■■□□□ 1.17
TRIM35-203ENST00000521253 POMKQ9H5K3 350 aa22.36■■□□□ 1.17
TRIM35-203ENST00000521253 FBXW11Q9UKB1 542 aa22.36■■□□□ 1.17
TRIM35-203ENST00000521253 PLXNA3P51805 1871 aa22.35■■□□□ 1.17
TRIM35-203ENST00000521253 ANO9A1A5B4 782 aa22.35■■□□□ 1.17
TRIM35-203ENST00000521253 LOC730098B7Z3J9 87 aa22.35■■□□□ 1.17
TRIM35-203ENST00000521253 PIRO00625 290 aa22.35■■□□□ 1.17
TRIM35-203ENST00000521253 CLIC2O15247 247 aa22.35■■□□□ 1.17
TRIM35-203ENST00000521253 TBC1D4O60343 1298 aa22.35■■□□□ 1.17
TRIM35-203ENST00000521253 LILRA4P59901 499 aa22.35■■□□□ 1.17
TRIM35-203ENST00000521253 SNRPFP62306 86 aaKnown RBP22.35■■□□□ 1.17
TRIM35-203ENST00000521253 C15orf39Q6ZRI6 1047 aa22.35■■□□□ 1.17
TRIM35-203ENST00000521253 HS2ST1Q7LGA3 356 aa22.35■■□□□ 1.17
TRIM35-203ENST00000521253 NT5DC4Q86YG4 428 aa22.35■■□□□ 1.17
TRIM35-203ENST00000521253 APPL2Q8NEU8 664 aa22.35■■□□□ 1.17
TRIM35-203ENST00000521253 PDE11AQ9HCR9 933 aa22.35■■□□□ 1.17
TRIM35-203ENST00000521253 CCDC195A0A1B0GUA6 201 aa22.34■■□□□ 1.17
TRIM35-203ENST00000521253 H7C4K7 107 aa22.34■■□□□ 1.17
TRIM35-203ENST00000521253 SPTLC1O15269 473 aa22.34■■□□□ 1.17
TRIM35-203ENST00000521253 ANP32AP39687 249 aaKnown RBP22.34■■□□□ 1.17
TRIM35-203ENST00000521253 TFAMQ00059 246 aaKnown RBP22.34■■□□□ 1.17
TRIM35-203ENST00000521253 SLC8B1Q6J4K2 584 aa22.34■■□□□ 1.17
TRIM35-203ENST00000521253 DSTYKQ6XUX3 929 aa22.34■■□□□ 1.17
TRIM35-203ENST00000521253 FAM84AQ96KN4 292 aa22.34■■□□□ 1.17
TRIM35-203ENST00000521253 FBXL5Q9UKA1 691 aa22.34■■□□□ 1.17
TRIM35-203ENST00000521253 TIMM13Q9Y5L4 95 aaPredicted RBP22.34■■□□□ 1.17
TRIM35-203ENST00000521253 ANK1P16157 1881 aa22.33■■□□□ 1.17
TRIM35-203ENST00000521253 ZNF233A6NK53 670 aa22.33■■□□□ 1.17
TRIM35-203ENST00000521253 SP100P23497 879 aaPredicted RBP22.33■■□□□ 1.17
TRIM35-203ENST00000521253 CYP2J2P51589 502 aa22.33■■□□□ 1.17
TRIM35-203ENST00000521253 SNW1Q13573 536 aaKnown RBP22.33■■□□□ 1.17
TRIM35-203ENST00000521253 CTXN3Q4LDR2 81 aa22.33■■□□□ 1.17
TRIM35-203ENST00000521253 ZNF280DQ6N043 979 aa22.33■■□□□ 1.17
TRIM35-203ENST00000521253 ENGASEQ8NFI3 743 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms