RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 PCDHB13Q9Y5F0 798 aa18.54■□□□□ 0.56
SQLE-205ENST00000521232 M0QZQ0 153 aa18.53■□□□□ 0.56
SQLE-205ENST00000521232 IDEP14735 1019 aa18.53■□□□□ 0.56
SQLE-205ENST00000521232 ADSSP30520 456 aa18.53■□□□□ 0.56
SQLE-205ENST00000521232 GBP2P32456 591 aaPredicted RBP18.53■□□□□ 0.56
SQLE-205ENST00000521232 AARSP49588 968 aaKnown RBP eCLIP18.53■□□□□ 0.56
SQLE-205ENST00000521232 ACOT2P49753 483 aa18.53■□□□□ 0.56
SQLE-205ENST00000521232 ROR1Q01973 937 aa18.53■□□□□ 0.56
SQLE-205ENST00000521232 KCNA1Q09470 495 aa18.53■□□□□ 0.56
SQLE-205ENST00000521232 POSTNQ15063 836 aa18.53■□□□□ 0.56
SQLE-205ENST00000521232 E2F4Q16254 413 aa18.53■□□□□ 0.56
SQLE-205ENST00000521232 L1TD1Q5T7N2 865 aaKnown RBP18.53■□□□□ 0.56
SQLE-205ENST00000521232 SPATA1Q5VX52 437 aa18.53■□□□□ 0.56
SQLE-205ENST00000521232 ATL3Q6DD88 541 aa18.53■□□□□ 0.56
SQLE-205ENST00000521232 SHC4Q6S5L8 630 aa18.53■□□□□ 0.56
SQLE-205ENST00000521232 TMEM130Q8N3G9 435 aa18.53■□□□□ 0.56
SQLE-205ENST00000521232 FBXL6Q8N531 539 aa18.53■□□□□ 0.56
SQLE-205ENST00000521232 APPL2Q8NEU8 664 aa18.53■□□□□ 0.56
SQLE-205ENST00000521232 SLC7A14Q8TBB6 771 aa18.53■□□□□ 0.56
SQLE-205ENST00000521232 ACCSQ96QU6 501 aa18.53■□□□□ 0.56
SQLE-205ENST00000521232 MYADMQ96S97 322 aa18.53■□□□□ 0.56
SQLE-205ENST00000521232 LRRC27Q9C0I9 530 aa18.53■□□□□ 0.56
SQLE-205ENST00000521232 TNMDQ9H2S6 317 aa18.53■□□□□ 0.56
SQLE-205ENST00000521232 IKZF4Q9H2S9 585 aa18.53■□□□□ 0.56
SQLE-205ENST00000521232 CUEDC2Q9H467 287 aa18.53■□□□□ 0.56
SQLE-205ENST00000521232 ASB7Q9H672 318 aa18.53■□□□□ 0.56
SQLE-205ENST00000521232 PANK4Q9NVE7 773 aa18.53■□□□□ 0.56
SQLE-205ENST00000521232 KBTBD4Q9NVX7 518 aa18.53■□□□□ 0.56
SQLE-205ENST00000521232 TBC1D7Q9P0N9 293 aa18.53■□□□□ 0.56
SQLE-205ENST00000521232 PCDHB8Q9UN66 801 aa18.53■□□□□ 0.56
SQLE-205ENST00000521232 EXOC7Q9UPT5 735 aa18.53■□□□□ 0.56
SQLE-205ENST00000521232 DERAQ9Y315 318 aa18.53■□□□□ 0.56
SQLE-205ENST00000521232 ANK1P16157 1881 aa18.52■□□□□ 0.56
SQLE-205ENST00000521232 XYLBO75191 536 aa18.52■□□□□ 0.56
SQLE-205ENST00000521232 TDGQ13569 410 aa18.52■□□□□ 0.56
SQLE-205ENST00000521232 ALCAMQ13740 583 aa18.52■□□□□ 0.56
SQLE-205ENST00000521232 PKP1Q13835 747 aa18.52■□□□□ 0.56
SQLE-205ENST00000521232 JADE1Q6IE81 842 aa18.52■□□□□ 0.56
SQLE-205ENST00000521232 CRELD2Q6UXH1 353 aaPredicted RBP18.52■□□□□ 0.56
SQLE-205ENST00000521232 GRASPQ7Z6J2 395 aaPredicted RBP18.52■□□□□ 0.56
SQLE-205ENST00000521232 KCNG4Q8TDN1 519 aa18.52■□□□□ 0.56
SQLE-205ENST00000521232 FAM212AQ96EL1 285 aa18.52■□□□□ 0.56
SQLE-205ENST00000521232 SMOC2Q9H3U7 446 aa18.52■□□□□ 0.56
SQLE-205ENST00000521232 FBXL5Q9UKA1 691 aa18.52■□□□□ 0.56
SQLE-205ENST00000521232 NOTCH4Q99466 2003 aa18.51■□□□□ 0.55
SQLE-205ENST00000521232 WDR27A2RRH5 827 aa18.51■□□□□ 0.55
SQLE-205ENST00000521232 CCL16O15467 120 aa18.51■□□□□ 0.55
SQLE-205ENST00000521232 OAZ2O95190 189 aa18.51■□□□□ 0.55
SQLE-205ENST00000521232 GCNT3O95395 438 aa18.51■□□□□ 0.55
SQLE-205ENST00000521232 LAMP2P13473 410 aa18.51■□□□□ 0.55
SQLE-205ENST00000521232 ATF2P15336 505 aa18.51■□□□□ 0.55
SQLE-205ENST00000521232 PAX3P23760 479 aa18.51■□□□□ 0.55
SQLE-205ENST00000521232 FSHRP23945 695 aa18.51■□□□□ 0.55
SQLE-205ENST00000521232 PLA2G5P39877 138 aa18.51■□□□□ 0.55
SQLE-205ENST00000521232 GUCY2FP51841 1108 aa18.51■□□□□ 0.55
SQLE-205ENST00000521232 CASP5P51878 434 aa18.51■□□□□ 0.55
SQLE-205ENST00000521232 FOXD4L6Q3SYB3 417 aaPredicted RBP18.51■□□□□ 0.55
SQLE-205ENST00000521232 CTXN3Q4LDR2 81 aa18.51■□□□□ 0.55
SQLE-205ENST00000521232 FOXD4L3Q6VB84 417 aaPredicted RBP18.51■□□□□ 0.55
SQLE-205ENST00000521232 CCDC65Q8IXS2 484 aa18.51■□□□□ 0.55
SQLE-205ENST00000521232 IQUBQ8NA54 791 aa18.51■□□□□ 0.55
SQLE-205ENST00000521232 SPRYD3Q8NCJ5 442 aa18.51■□□□□ 0.55
SQLE-205ENST00000521232 BEST2Q8NFU1 509 aa18.51■□□□□ 0.55
SQLE-205ENST00000521232 POMGNT1Q8WZA1 660 aa18.51■□□□□ 0.55
SQLE-205ENST00000521232 NXPE3Q969Y0 559 aa18.51■□□□□ 0.55
SQLE-205ENST00000521232 FAM122AQ96E09 287 aa18.51■□□□□ 0.55
SQLE-205ENST00000521232 CFAP45Q9UL16 551 aa18.51■□□□□ 0.55
SQLE-205ENST00000521232 ZFP37Q9Y6Q3 630 aaPredicted RBP18.51■□□□□ 0.55
SQLE-205ENST00000521232 ARHGEF37A1IGU5 675 aa18.5■□□□□ 0.55
SQLE-205ENST00000521232 LILRA4P59901 499 aa18.5■□□□□ 0.55
SQLE-205ENST00000521232 AMPD3Q01432 767 aa18.5■□□□□ 0.55
SQLE-205ENST00000521232 TMEM132DQ14C87 1099 aa18.5■□□□□ 0.55
SQLE-205ENST00000521232 TPGS2Q68CL5 300 aa18.5■□□□□ 0.55
SQLE-205ENST00000521232 ZNF280DQ6N043 979 aa18.5■□□□□ 0.55
SQLE-205ENST00000521232 CNNM4Q6P4Q7 775 aa18.5■□□□□ 0.55
SQLE-205ENST00000521232 SUGP1Q8IWZ8 645 aaKnown RBP18.5■□□□□ 0.55
SQLE-205ENST00000521232 TCEAL8Q8IYN2 117 aa18.5■□□□□ 0.55
SQLE-205ENST00000521232 FGFBP2Q9BYJ0 223 aa18.5■□□□□ 0.55
SQLE-205ENST00000521232 MAFFQ9ULX9 164 aa18.5■□□□□ 0.55
SQLE-205ENST00000521232 PCDHA7Q9UN72 937 aa18.5■□□□□ 0.55
SQLE-205ENST00000521232 C2CD2Q9Y426 696 aa18.5■□□□□ 0.55
SQLE-205ENST00000521232 ANO9A1A5B4 782 aa18.49■□□□□ 0.55
SQLE-205ENST00000521232 PIRO00625 290 aa18.49■□□□□ 0.55
SQLE-205ENST00000521232 NFICP08651 508 aa18.49■□□□□ 0.55
SQLE-205ENST00000521232 GARTP22102 1010 aa18.49■□□□□ 0.55
SQLE-205ENST00000521232 ELF1P32519 619 aa18.49■□□□□ 0.55
SQLE-205ENST00000521232 ARPP19P56211 112 aa18.49■□□□□ 0.55
SQLE-205ENST00000521232 NTHL1P78549 312 aa18.49■□□□□ 0.55
SQLE-205ENST00000521232 YWHAHQ04917 246 aaPredicted RBP18.49■□□□□ 0.55
SQLE-205ENST00000521232 C9orf57Q5W0N0 161 aa18.49■□□□□ 0.55
SQLE-205ENST00000521232 DSTYKQ6XUX3 929 aa18.49■□□□□ 0.55
SQLE-205ENST00000521232 GET4Q7L5D6 327 aaPredicted RBP18.49■□□□□ 0.55
SQLE-205ENST00000521232 DHX58Q96C10 678 aa18.49■□□□□ 0.55
SQLE-205ENST00000521232 OXCT2Q9BYC2 517 aaPredicted RBP18.49■□□□□ 0.55
SQLE-205ENST00000521232 TRIM9Q9C026 710 aa18.49■□□□□ 0.55
SQLE-205ENST00000521232 TMEM206Q9H813 350 aa18.49■□□□□ 0.55
SQLE-205ENST00000521232 DNMT3BQ9UBC3 853 aaKnown RBP18.49■□□□□ 0.55
SQLE-205ENST00000521232 RCOR1Q9UKL0 485 aa18.49■□□□□ 0.55
SQLE-205ENST00000521232 POLIQ9UNA4 740 aa18.49■□□□□ 0.55
SQLE-205ENST00000521232 DUSP12Q9UNI6 340 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms