RNA–Protein interactions for RNA: ENST00000520913.1

PVT1-209, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 584 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-209ENST00000520913 HTR4Q13639 388 aa11.68□□□□□ -0.54
PVT1-209ENST00000520913 MRPL58Q14197 206 aaKnown RBP11.68□□□□□ -0.54
PVT1-209ENST00000520913 CTXN3Q4LDR2 81 aa11.68□□□□□ -0.54
PVT1-209ENST00000520913 PABPC1LQ4VXU2 614 aaKnown RBP11.68□□□□□ -0.54
PVT1-209ENST00000520913 RRAGBQ5VZM2 374 aa11.68□□□□□ -0.54
PVT1-209ENST00000520913 TPGS2Q68CL5 300 aa11.68□□□□□ -0.54
PVT1-209ENST00000520913 CWF19L1Q69YN2 538 aaKnown RBP11.68□□□□□ -0.54
PVT1-209ENST00000520913 ASTLQ6HA08 431 aaPredicted RBP11.68□□□□□ -0.54
PVT1-209ENST00000520913 SLC39A4Q6P5W5 647 aa11.68□□□□□ -0.54
PVT1-209ENST00000520913 CCDC73Q6ZRK6 1079 aa11.68□□□□□ -0.54
PVT1-209ENST00000520913 MTSS1LQ765P7 747 aa11.68□□□□□ -0.54
PVT1-209ENST00000520913 SV2BQ7L1I2 683 aa11.68□□□□□ -0.54
PVT1-209ENST00000520913 DYMQ7RTS9 669 aa11.68□□□□□ -0.54
PVT1-209ENST00000520913 SFR1Q86XK3 245 aa11.68□□□□□ -0.54
PVT1-209ENST00000520913 CD302Q8IX05 232 aa11.68□□□□□ -0.54
PVT1-209ENST00000520913 ZNF461Q8TAF7 563 aa11.68□□□□□ -0.54
PVT1-209ENST00000520913 RSAD2Q8WXG1 361 aa11.68□□□□□ -0.54
PVT1-209ENST00000520913 DDX12PQ92771 950 aa11.68□□□□□ -0.54
PVT1-209ENST00000520913 CLIC6Q96NY7 704 aa11.68□□□□□ -0.54
PVT1-209ENST00000520913 USP28Q96RU2 1077 aa11.68□□□□□ -0.54
PVT1-209ENST00000520913 IRF2BPLQ9H1B7 796 aa11.68□□□□□ -0.54
PVT1-209ENST00000520913 FBXL5Q9UKA1 691 aa11.68□□□□□ -0.54
PVT1-209ENST00000520913 CPSF3Q9UKF6 684 aaKnown RBP11.68□□□□□ -0.54
PVT1-209ENST00000520913 CDH7Q9ULB5 785 aa11.68□□□□□ -0.54
PVT1-209ENST00000520913 PCDHB8Q9UN66 801 aa11.68□□□□□ -0.54
PVT1-209ENST00000520913 NUMBLQ9Y6R0 609 aa11.68□□□□□ -0.54
PVT1-209ENST00000520913 FANCMQ8IYD8 2048 aa11.67□□□□□ -0.54
PVT1-209ENST00000520913 ZNF638Q14966 1978 aaKnown RBP11.67□□□□□ -0.54
PVT1-209ENST00000520913 ARHGEF37A1IGU5 675 aa11.67□□□□□ -0.54
PVT1-209ENST00000520913 LACTBL1A8MY62 500 aa11.67□□□□□ -0.54
PVT1-209ENST00000520913 ANHXE9PGG2 379 aa11.67□□□□□ -0.54
PVT1-209ENST00000520913 M0QZQ0 153 aa11.67□□□□□ -0.54
PVT1-209ENST00000520913 PRRG1O14668 218 aa11.67□□□□□ -0.54
PVT1-209ENST00000520913 GALR2O43603 387 aaPredicted RBP11.67□□□□□ -0.54
PVT1-209ENST00000520913 TBC1D4O60343 1298 aa11.67□□□□□ -0.54
PVT1-209ENST00000520913 ABLIM3O94929 683 aa11.67□□□□□ -0.54
PVT1-209ENST00000520913 ADRB2P07550 413 aa11.67□□□□□ -0.54
PVT1-209ENST00000520913 CFHP08603 1231 aa11.67□□□□□ -0.54
PVT1-209ENST00000520913 CPB1P15086 417 aa11.67□□□□□ -0.54
PVT1-209ENST00000520913 ATF2P15336 505 aa11.67□□□□□ -0.54
PVT1-209ENST00000520913 GAP43P17677 238 aa11.67□□□□□ -0.54
PVT1-209ENST00000520913 AOC1P19801 751 aa11.67□□□□□ -0.54
PVT1-209ENST00000520913 STAT6P42226 847 aa11.67□□□□□ -0.54
PVT1-209ENST00000520913 NASPP49321 788 aaPredicted RBP11.67□□□□□ -0.54
PVT1-209ENST00000520913 MRE11P49959 708 aa11.67□□□□□ -0.54
PVT1-209ENST00000520913 CLCN5P51795 746 aa11.67□□□□□ -0.54
PVT1-209ENST00000520913 ARPP19P56211 112 aa11.67□□□□□ -0.54
PVT1-209ENST00000520913 YWHAHQ04917 246 aaPredicted RBP11.67□□□□□ -0.54
PVT1-209ENST00000520913 SLC39A14Q15043 492 aa11.67□□□□□ -0.54
PVT1-209ENST00000520913 STK38Q15208 465 aa11.67□□□□□ -0.54
PVT1-209ENST00000520913 ZBTB6Q15916 424 aa11.67□□□□□ -0.54
PVT1-209ENST00000520913 ZC2HC1CQ53FD0 456 aaPredicted RBP11.67□□□□□ -0.54
PVT1-209ENST00000520913 ZBTB41Q5SVQ8 909 aa11.67□□□□□ -0.54
PVT1-209ENST00000520913 SLFN12LQ6IEE8 588 aa11.67□□□□□ -0.54
PVT1-209ENST00000520913 ALYREFQ86V81 257 aaKnown RBP11.67□□□□□ -0.54
PVT1-209ENST00000520913 SIX5Q8N196 739 aa11.67□□□□□ -0.54
PVT1-209ENST00000520913 SLC44A3Q8N4M1 653 aa11.67□□□□□ -0.54
PVT1-209ENST00000520913 TMEM105Q8N8V8 129 aa11.67□□□□□ -0.54
PVT1-209ENST00000520913 FLCNQ8NFG4 579 aa11.67□□□□□ -0.54
PVT1-209ENST00000520913 BEST2Q8NFU1 509 aa11.67□□□□□ -0.54
PVT1-209ENST00000520913 FGF13Q92913 245 aa11.67□□□□□ -0.54
PVT1-209ENST00000520913 OXCT2Q9BYC2 517 aaPredicted RBP11.67□□□□□ -0.54
PVT1-209ENST00000520913 HCFC1R1Q9NWW0 138 aa11.67□□□□□ -0.54
PVT1-209ENST00000520913 WNT16Q9UBV4 365 aa11.67□□□□□ -0.54
PVT1-209ENST00000520913 KCNH3Q9ULD8 1083 aa11.67□□□□□ -0.54
PVT1-209ENST00000520913 DERAQ9Y315 318 aa11.67□□□□□ -0.54
PVT1-209ENST00000520913 INSL5Q9Y5Q6 135 aa11.67□□□□□ -0.54
PVT1-209ENST00000520913 KIF26AQ9ULI4 1882 aaPredicted RBP11.67□□□□□ -0.54
PVT1-209ENST00000520913 MYMKA6NI61 221 aa11.66□□□□□ -0.54
PVT1-209ENST00000520913 PPP1R37O75864 691 aa11.66□□□□□ -0.54
PVT1-209ENST00000520913 ODC1P11926 461 aa11.66□□□□□ -0.54
PVT1-209ENST00000520913 RFX1P22670 979 aa11.66□□□□□ -0.54
PVT1-209ENST00000520913 PAX3P23760 479 aa11.66□□□□□ -0.54
PVT1-209ENST00000520913 AARSP49588 968 aaKnown RBP eCLIP11.66□□□□□ -0.54
PVT1-209ENST00000520913 ALCAMQ13740 583 aa11.66□□□□□ -0.54
PVT1-209ENST00000520913 TMEM132DQ14C87 1099 aa11.66□□□□□ -0.54
PVT1-209ENST00000520913 SPATA1Q5VX52 437 aa11.66□□□□□ -0.54
PVT1-209ENST00000520913 ADALQ6DHV7 355 aa11.66□□□□□ -0.54
PVT1-209ENST00000520913 JADE1Q6IE81 842 aa11.66□□□□□ -0.54
PVT1-209ENST00000520913 HSCBQ8IWL3 235 aa11.66□□□□□ -0.54
PVT1-209ENST00000520913 NPAS3Q8IXF0 933 aa11.66□□□□□ -0.54
PVT1-209ENST00000520913 TCEAL8Q8IYN2 117 aa11.66□□□□□ -0.54
PVT1-209ENST00000520913 ELMOD1Q8N336 334 aa11.66□□□□□ -0.54
PVT1-209ENST00000520913 FGF14Q92915 247 aa11.66□□□□□ -0.54
PVT1-209ENST00000520913 SNX21Q969T3 373 aa11.66□□□□□ -0.54
PVT1-209ENST00000520913 DNAJC19Q96DA6 116 aa11.66□□□□□ -0.54
PVT1-209ENST00000520913 FAM212AQ96EL1 285 aa11.66□□□□□ -0.54
PVT1-209ENST00000520913 RTP3Q9BQQ7 232 aa11.66□□□□□ -0.54
PVT1-209ENST00000520913 ASB7Q9H672 318 aa11.66□□□□□ -0.54
PVT1-209ENST00000520913 MRPL44Q9H9J2 332 aaKnown RBP11.66□□□□□ -0.54
PVT1-209ENST00000520913 CYP4F11Q9HBI6 524 aa11.66□□□□□ -0.54
PVT1-209ENST00000520913 AVENQ9NQS1 362 aaPredicted RBP11.66□□□□□ -0.54
PVT1-209ENST00000520913 OLFML3Q9NRN5 406 aa11.66□□□□□ -0.54
PVT1-209ENST00000520913 DNMT3BQ9UBC3 853 aaKnown RBP11.66□□□□□ -0.54
PVT1-209ENST00000520913 AFF4Q9UHB7 1163 aaKnown RBP11.66□□□□□ -0.54
PVT1-209ENST00000520913 AGO2Q9UKV8 859 aaKnown RBP11.66□□□□□ -0.54
PVT1-209ENST00000520913 EXOC7Q9UPT5 735 aa11.66□□□□□ -0.54
PVT1-209ENST00000520913 STYXL1Q9Y6J8 313 aa11.66□□□□□ -0.54
PVT1-209ENST00000520913 PTPRDP23468 1912 aa11.65□□□□□ -0.54
PVT1-209ENST00000520913 HELZP42694 1942 aaKnown RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms