RNA–Protein interactions for RNA: ENST00000520687.1

SPARC-202, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 1,598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-202ENST00000520687 MMEP08473 750 aa10.64□□□□□ -0.71
SPARC-202ENST00000520687 CLTAP09496 248 aa10.64□□□□□ -0.71
SPARC-202ENST00000520687 UNGP13051 313 aaPredicted RBP10.64□□□□□ -0.71
SPARC-202ENST00000520687 ACO1P21399 889 aaKnown RBP10.64□□□□□ -0.71
SPARC-202ENST00000520687 CHRNA3P32297 505 aa10.64□□□□□ -0.71
SPARC-202ENST00000520687 CTNNA1P35221 906 aaKnown RBP10.64□□□□□ -0.71
SPARC-202ENST00000520687 NSFP46459 744 aaKnown RBP10.64□□□□□ -0.71
SPARC-202ENST00000520687 ACOT2P49753 483 aa10.64□□□□□ -0.71
SPARC-202ENST00000520687 DNA2P51530 1060 aa10.64□□□□□ -0.71
SPARC-202ENST00000520687 CDC42EP1Q00587 391 aa10.64□□□□□ -0.71
SPARC-202ENST00000520687 SLC7A5Q01650 507 aa10.64□□□□□ -0.71
SPARC-202ENST00000520687 TNFAIP2Q03169 654 aa10.64□□□□□ -0.71
SPARC-202ENST00000520687 CENPCQ03188 943 aa10.64□□□□□ -0.71
SPARC-202ENST00000520687 PTP4A2Q12974 167 aa10.64□□□□□ -0.71
SPARC-202ENST00000520687 MTMR3Q13615 1198 aa10.64□□□□□ -0.71
SPARC-202ENST00000520687 NCOA4Q13772 614 aa10.64□□□□□ -0.71
SPARC-202ENST00000520687 Q3C1V9 767 aa10.64□□□□□ -0.71
SPARC-202ENST00000520687 ZNF792Q3KQV3 632 aa10.64□□□□□ -0.71
SPARC-202ENST00000520687 CFAP58Q5T655 872 aa10.64□□□□□ -0.71
SPARC-202ENST00000520687 SEL1L2Q5TEA6 688 aa10.64□□□□□ -0.71
SPARC-202ENST00000520687 SPRYD7Q5W111 196 aa10.64□□□□□ -0.71
SPARC-202ENST00000520687 MPZL3Q6UWV2 235 aa10.64□□□□□ -0.71
SPARC-202ENST00000520687 PALB2Q86YC2 1186 aa10.64□□□□□ -0.71
SPARC-202ENST00000520687 KLHL7Q8IXQ5 586 aa10.64□□□□□ -0.71
SPARC-202ENST00000520687 ZNF564Q8TBZ8 553 aaPredicted RBP10.64□□□□□ -0.71
SPARC-202ENST00000520687 TCHPQ9BT92 498 aa10.64□□□□□ -0.71
SPARC-202ENST00000520687 NUP85Q9BW27 656 aa10.64□□□□□ -0.71
SPARC-202ENST00000520687 ZNF518BQ9C0D4 1074 aa10.64□□□□□ -0.71
SPARC-202ENST00000520687 SUGCTQ9HAC7 445 aa10.64□□□□□ -0.71
SPARC-202ENST00000520687 SMARCAL1Q9NZC9 954 aa10.64□□□□□ -0.71
SPARC-202ENST00000520687 EHD2Q9NZN4 543 aa10.64□□□□□ -0.71
SPARC-202ENST00000520687 PARP2Q9UGN5 583 aa10.64□□□□□ -0.71
SPARC-202ENST00000520687 ADAM21Q9UKJ8 722 aa10.64□□□□□ -0.71
SPARC-202ENST00000520687 COG5Q9UP83 839 aa10.64□□□□□ -0.71
SPARC-202ENST00000520687 TRPC6Q9Y210 931 aa10.64□□□□□ -0.71
SPARC-202ENST00000520687 SCINQ9Y6U3 715 aa10.64□□□□□ -0.71
SPARC-202ENST00000520687 VCANP13611 3396 aa10.64□□□□□ -0.71
SPARC-202ENST00000520687 MYH9P35579 1960 aaKnown RBP10.63□□□□□ -0.71
SPARC-202ENST00000520687 ZBTB42B2RXF5 422 aa10.63□□□□□ -0.71
SPARC-202ENST00000520687 SPOPO43791 374 aa10.63□□□□□ -0.71
SPARC-202ENST00000520687 SORBS3O60504 671 aa10.63□□□□□ -0.71
SPARC-202ENST00000520687 B4GALT4O60513 344 aa10.63□□□□□ -0.71
SPARC-202ENST00000520687 PPFIA4O75335 1185 aa10.63□□□□□ -0.71
SPARC-202ENST00000520687 ARIH2O95376 493 aa10.63□□□□□ -0.71
SPARC-202ENST00000520687 VNN1O95497 513 aa10.63□□□□□ -0.71
SPARC-202ENST00000520687 FGGP02679 453 aa10.63□□□□□ -0.71
SPARC-202ENST00000520687 PGK2P07205 417 aa10.63□□□□□ -0.71
SPARC-202ENST00000520687 HOXC6P09630 235 aa10.63□□□□□ -0.71
SPARC-202ENST00000520687 MYBL2P10244 700 aa10.63□□□□□ -0.71
SPARC-202ENST00000520687 COMTP21964 271 aa10.63□□□□□ -0.71
SPARC-202ENST00000520687 PROZP22891 400 aa10.63□□□□□ -0.71
SPARC-202ENST00000520687 TMOD1P28289 359 aa10.63□□□□□ -0.71
SPARC-202ENST00000520687 MAN1A1P33908 653 aa10.63□□□□□ -0.71
SPARC-202ENST00000520687 HSPA9P38646 679 aaKnown RBP10.63□□□□□ -0.71
SPARC-202ENST00000520687 PHKA2P46019 1235 aa10.63□□□□□ -0.71
SPARC-202ENST00000520687 PEX5P50542 639 aa10.63□□□□□ -0.71
SPARC-202ENST00000520687 RWDD2BP57060 319 aa10.63□□□□□ -0.71
SPARC-202ENST00000520687 HSDL1Q3SXM5 330 aa10.63□□□□□ -0.71
SPARC-202ENST00000520687 MAMDC4Q6UXC1 1216 aa10.63□□□□□ -0.71
SPARC-202ENST00000520687 LRIG3Q6UXM1 1119 aa10.63□□□□□ -0.71
SPARC-202ENST00000520687 APBB1IPQ7Z5R6 666 aaPredicted RBP10.63□□□□□ -0.71
SPARC-202ENST00000520687 UBE2Q1Q7Z7E8 422 aa10.63□□□□□ -0.71
SPARC-202ENST00000520687 PHF13Q86YI8 300 aaPredicted RBP10.63□□□□□ -0.71
SPARC-202ENST00000520687 MCOLN2Q8IZK6 566 aa10.63□□□□□ -0.71
SPARC-202ENST00000520687 TTC39CQ8N584 583 aa10.63□□□□□ -0.71
SPARC-202ENST00000520687 RNF149Q8NC42 400 aa10.63□□□□□ -0.71
SPARC-202ENST00000520687 PPTC7Q8NI37 304 aa10.63□□□□□ -0.71
SPARC-202ENST00000520687 CD101Q93033 1021 aa10.63□□□□□ -0.71
SPARC-202ENST00000520687 SH3GL2Q99962 352 aa10.63□□□□□ -0.71
SPARC-202ENST00000520687 HOMER3Q9NSC5 361 aa10.63□□□□□ -0.71
SPARC-202ENST00000520687 SLC5A4Q9NY91 659 aa10.63□□□□□ -0.71
SPARC-202ENST00000520687 VPS18Q9P253 973 aa10.63□□□□□ -0.71
SPARC-202ENST00000520687 ANKFY1Q9P2R3 1169 aa10.63□□□□□ -0.71
SPARC-202ENST00000520687 CNOT8Q9UFF9 292 aaKnown RBP10.63□□□□□ -0.71
SPARC-202ENST00000520687 FEZ2Q9UHY8 353 aaPredicted RBP10.63□□□□□ -0.71
SPARC-202ENST00000520687 CPSF3Q9UKF6 684 aaKnown RBP10.63□□□□□ -0.71
SPARC-202ENST00000520687 TNFSF13BQ9Y275 285 aa10.63□□□□□ -0.71
SPARC-202ENST00000520687 IVNS1ABPQ9Y6Y0 642 aa10.63□□□□□ -0.71
SPARC-202ENST00000520687 FAM189A1O60320 539 aa10.62□□□□□ -0.71
SPARC-202ENST00000520687 ASS1P00966 412 aaKnown RBP10.62□□□□□ -0.71
SPARC-202ENST00000520687 TNNC2P02585 160 aa10.62□□□□□ -0.71
SPARC-202ENST00000520687 SRGAP2CP0DJJ0 459 aa10.62□□□□□ -0.71
SPARC-202ENST00000520687 MCF2P10911 925 aa10.62□□□□□ -0.71
SPARC-202ENST00000520687 CARSP49589 748 aaKnown RBP10.62□□□□□ -0.71
SPARC-202ENST00000520687 NOP14P78316 857 aaKnown RBP10.62□□□□□ -0.71
SPARC-202ENST00000520687 TAP1Q03518 808 aa10.62□□□□□ -0.71
SPARC-202ENST00000520687 CRHR2Q13324 411 aa10.62□□□□□ -0.71
SPARC-202ENST00000520687 TRPC3Q13507 836 aa10.62□□□□□ -0.71
SPARC-202ENST00000520687 MESDQ14696 234 aa10.62□□□□□ -0.71
SPARC-202ENST00000520687 CYP1B1Q16678 543 aa10.62□□□□□ -0.71
SPARC-202ENST00000520687 ATF7IP2Q5U623 682 aa10.62□□□□□ -0.71
SPARC-202ENST00000520687 ARMCX2Q7L311 632 aa10.62□□□□□ -0.71
SPARC-202ENST00000520687 IQCKQ8N0W5 287 aa10.62□□□□□ -0.71
SPARC-202ENST00000520687 CASKIN2Q8WXE0 1202 aa10.62□□□□□ -0.71
SPARC-202ENST00000520687 IFT81Q8WYA0 676 aa10.62□□□□□ -0.71
SPARC-202ENST00000520687 ZBTB45Q96K62 511 aaPredicted RBP10.62□□□□□ -0.71
SPARC-202ENST00000520687 HAPLN2Q9GZV7 340 aa10.62□□□□□ -0.71
SPARC-202ENST00000520687 PTPRHQ9HD43 1115 aa10.62□□□□□ -0.71
SPARC-202ENST00000520687 PCYOX1Q9UHG3 505 aa10.62□□□□□ -0.71
SPARC-202ENST00000520687 ARIH1Q9Y4X5 557 aaPredicted RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms