RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 SFR1Q86XK3 245 aa17.55■□□□□ 0.4
IGHV3-42-201ENST00000520410 BEST2Q8NFU1 509 aa17.55■□□□□ 0.4
IGHV3-42-201ENST00000520410 ZNF461Q8TAF7 563 aa17.55■□□□□ 0.4
IGHV3-42-201ENST00000520410 FOXD4L4Q8WXT5 416 aaPredicted RBP17.55■□□□□ 0.4
IGHV3-42-201ENST00000520410 MCRS1Q96EZ8 462 aa17.55■□□□□ 0.4
IGHV3-42-201ENST00000520410 SUSD3Q96L08 255 aa17.55■□□□□ 0.4
IGHV3-42-201ENST00000520410 RTP3Q9BQQ7 232 aa17.55■□□□□ 0.4
IGHV3-42-201ENST00000520410 PANK2Q9BZ23 570 aa17.55■□□□□ 0.4
IGHV3-42-201ENST00000520410 CCSER1Q9C0I3 900 aa17.55■□□□□ 0.4
IGHV3-42-201ENST00000520410 TBC1D7Q9P0N9 293 aa17.55■□□□□ 0.4
IGHV3-42-201ENST00000520410 STK17AQ9UEE5 414 aa17.55■□□□□ 0.4
IGHV3-42-201ENST00000520410 FBXO2Q9UK22 296 aaPredicted RBP17.55■□□□□ 0.4
IGHV3-42-201ENST00000520410 PCDHB8Q9UN66 801 aa17.55■□□□□ 0.4
IGHV3-42-201ENST00000520410 RHOP08100 348 aa17.54■□□□□ 0.4
IGHV3-42-201ENST00000520410 PTPN2P17706 415 aa17.54■□□□□ 0.4
IGHV3-42-201ENST00000520410 AOC1P19801 751 aa17.54■□□□□ 0.4
IGHV3-42-201ENST00000520410 SCP2P22307 547 aa17.54■□□□□ 0.4
IGHV3-42-201ENST00000520410 ACOT2P49753 483 aa17.54■□□□□ 0.4
IGHV3-42-201ENST00000520410 ADCY1Q08828 1119 aa17.54■□□□□ 0.4
IGHV3-42-201ENST00000520410 STK38Q15208 465 aa17.54■□□□□ 0.4
IGHV3-42-201ENST00000520410 ENOX2Q16206 610 aaKnown RBP17.54■□□□□ 0.4
IGHV3-42-201ENST00000520410 JADE1Q6IE81 842 aa17.54■□□□□ 0.4
IGHV3-42-201ENST00000520410 IQCEQ6IPM2 695 aa17.54■□□□□ 0.4
IGHV3-42-201ENST00000520410 SLC8B1Q6J4K2 584 aa17.54■□□□□ 0.4
IGHV3-42-201ENST00000520410 PDZD4Q76G19 769 aaPredicted RBP17.54■□□□□ 0.4
IGHV3-42-201ENST00000520410 SV2BQ7L1I2 683 aa17.54■□□□□ 0.4
IGHV3-42-201ENST00000520410 FGF14Q92915 247 aa17.54■□□□□ 0.4
IGHV3-42-201ENST00000520410 PGLYRP2Q96PD5 576 aa17.54■□□□□ 0.4
IGHV3-42-201ENST00000520410 MRPL44Q9H9J2 332 aaKnown RBP17.54■□□□□ 0.4
IGHV3-42-201ENST00000520410 TBC1D17Q9HA65 648 aa17.54■□□□□ 0.4
IGHV3-42-201ENST00000520410 ARHGEF3Q9NR81 526 aa17.54■□□□□ 0.4
IGHV3-42-201ENST00000520410 WNT16Q9UBV4 365 aa17.54■□□□□ 0.4
IGHV3-42-201ENST00000520410 INSL5Q9Y5Q6 135 aa17.54■□□□□ 0.4
IGHV3-42-201ENST00000520410 CITO14578 2027 aa17.54■□□□□ 0.4
IGHV3-42-201ENST00000520410 TRIP11Q15643 1979 aa17.53■□□□□ 0.4
IGHV3-42-201ENST00000520410 TTC26A0AVF1 554 aa17.53■□□□□ 0.4
IGHV3-42-201ENST00000520410 PI15O43692 258 aa17.53■□□□□ 0.4
IGHV3-42-201ENST00000520410 GCNT3O95395 438 aa17.53■□□□□ 0.4
IGHV3-42-201ENST00000520410 OR4Q2P0C623 313 aa17.53■□□□□ 0.4
IGHV3-42-201ENST00000520410 ZNF131P52739 623 aa17.53■□□□□ 0.4
IGHV3-42-201ENST00000520410 NUBP1P53384 320 aa17.53■□□□□ 0.4
IGHV3-42-201ENST00000520410 TMEM132DQ14C87 1099 aa17.53■□□□□ 0.4
IGHV3-42-201ENST00000520410 PTPAQ15257 358 aa17.53■□□□□ 0.4
IGHV3-42-201ENST00000520410 MAP4K3Q8IVH8 894 aa17.53■□□□□ 0.4
IGHV3-42-201ENST00000520410 POMGNT1Q8WZA1 660 aa17.53■□□□□ 0.4
IGHV3-42-201ENST00000520410 RPP25Q9BUL9 199 aaKnown RBP17.53■□□□□ 0.4
IGHV3-42-201ENST00000520410 BACH2Q9BYV9 841 aa17.53■□□□□ 0.4
IGHV3-42-201ENST00000520410 SRPRBQ9Y5M8 271 aaKnown RBP17.53■□□□□ 0.4
IGHV3-42-201ENST00000520410 MYO10Q9HD67 2058 aa17.52■□□□□ 0.4
IGHV3-42-201ENST00000520410 KRBA1A5PL33 1030 aa17.52■□□□□ 0.4
IGHV3-42-201ENST00000520410 TISP43B9A030 160 aa17.52■□□□□ 0.4
IGHV3-42-201ENST00000520410 ANKRD63C9JTQ0 380 aa17.52■□□□□ 0.4
IGHV3-42-201ENST00000520410 ANHXE9PGG2 379 aa17.52■□□□□ 0.4
IGHV3-42-201ENST00000520410 STX6O43752 255 aa17.52■□□□□ 0.4
IGHV3-42-201ENST00000520410 PIGRP01833 764 aa17.52■□□□□ 0.4
IGHV3-42-201ENST00000520410 NFICP08651 508 aa17.52■□□□□ 0.4
IGHV3-42-201ENST00000520410 MYL4P12829 197 aa17.52■□□□□ 0.4
IGHV3-42-201ENST00000520410 ATF2P15336 505 aa17.52■□□□□ 0.4
IGHV3-42-201ENST00000520410 NPR3P17342 541 aa17.52■□□□□ 0.4
IGHV3-42-201ENST00000520410 CEBPBP17676 345 aa17.52■□□□□ 0.4
IGHV3-42-201ENST00000520410 TWF1Q12792 350 aa17.52■□□□□ 0.4
IGHV3-42-201ENST00000520410 CYP4A22Q5TCH4 519 aa17.52■□□□□ 0.4
IGHV3-42-201ENST00000520410 TPGS2Q68CL5 300 aa17.52■□□□□ 0.4
IGHV3-42-201ENST00000520410 SLFN12LQ6IEE8 588 aa17.52■□□□□ 0.4
IGHV3-42-201ENST00000520410 CCDC73Q6ZRK6 1079 aa17.52■□□□□ 0.4
IGHV3-42-201ENST00000520410 RTL10Q7L3V2 364 aa17.52■□□□□ 0.4
IGHV3-42-201ENST00000520410 NPAS3Q8IXF0 933 aa17.52■□□□□ 0.4
IGHV3-42-201ENST00000520410 SYCP3Q8IZU3 236 aa17.52■□□□□ 0.4
IGHV3-42-201ENST00000520410 PDILTQ8N807 584 aa17.52■□□□□ 0.4
IGHV3-42-201ENST00000520410 ZNF512Q96ME7 567 aaPredicted RBP17.52■□□□□ 0.4
IGHV3-42-201ENST00000520410 USP28Q96RU2 1077 aa17.52■□□□□ 0.4
IGHV3-42-201ENST00000520410 AGO2Q9UKV8 859 aaKnown RBP17.52■□□□□ 0.4
IGHV3-42-201ENST00000520410 KCNH3Q9ULD8 1083 aa17.52■□□□□ 0.4
IGHV3-42-201ENST00000520410 EXOC7Q9UPT5 735 aa17.52■□□□□ 0.4
IGHV3-42-201ENST00000520410 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.52■□□□□ 0.4
IGHV3-42-201ENST00000520410 ZNF318Q5VUA4 2279 aa17.51■□□□□ 0.39
IGHV3-42-201ENST00000520410 A0A0B4J269 797 aa17.51■□□□□ 0.39
IGHV3-42-201ENST00000520410 GFRA3O60609 400 aa17.51■□□□□ 0.39
IGHV3-42-201ENST00000520410 SEC24AO95486 1093 aa17.51■□□□□ 0.39
IGHV3-42-201ENST00000520410 ODC1P11926 461 aa17.51■□□□□ 0.39
IGHV3-42-201ENST00000520410 CYP3A5P20815 502 aa17.51■□□□□ 0.39
IGHV3-42-201ENST00000520410 LRPAP1P30533 357 aa17.51■□□□□ 0.39
IGHV3-42-201ENST00000520410 GPC5P78333 572 aa17.51■□□□□ 0.39
IGHV3-42-201ENST00000520410 GTF2BQ00403 316 aa17.51■□□□□ 0.39
IGHV3-42-201ENST00000520410 FOXD4L6Q3SYB3 417 aaPredicted RBP17.51■□□□□ 0.39
IGHV3-42-201ENST00000520410 OVOS1Q6IE37 1185 aa17.51■□□□□ 0.39
IGHV3-42-201ENST00000520410 SLC39A4Q6P5W5 647 aa17.51■□□□□ 0.39
IGHV3-42-201ENST00000520410 FOXD4L3Q6VB84 417 aaPredicted RBP17.51■□□□□ 0.39
IGHV3-42-201ENST00000520410 RNF19BQ6ZMZ0 732 aa17.51■□□□□ 0.39
IGHV3-42-201ENST00000520410 HSCBQ8IWL3 235 aa17.51■□□□□ 0.39
IGHV3-42-201ENST00000520410 CD302Q8IX05 232 aa17.51■□□□□ 0.39
IGHV3-42-201ENST00000520410 INTS4Q96HW7 963 aaKnown RBP17.51■□□□□ 0.39
IGHV3-42-201ENST00000520410 ZSCAN16Q9H4T2 348 aaPredicted RBP17.51■□□□□ 0.39
IGHV3-42-201ENST00000520410 SLITRK6Q9H5Y7 841 aa17.51■□□□□ 0.39
IGHV3-42-201ENST00000520410 AFF4Q9UHB7 1163 aaKnown RBP17.51■□□□□ 0.39
IGHV3-42-201ENST00000520410 CPSF3Q9UKF6 684 aaKnown RBP17.51■□□□□ 0.39
IGHV3-42-201ENST00000520410 MTMR6Q9Y217 621 aa17.51■□□□□ 0.39
IGHV3-42-201ENST00000520410 MUC6Q6W4X9 2439 aa17.51■□□□□ 0.39
IGHV3-42-201ENST00000520410 ZNF197O14709 1029 aa17.5■□□□□ 0.39
IGHV3-42-201ENST00000520410 PPEF2O14830 753 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms