RNA–Protein interactions for RNA: ENST00000520260.5

CTNNA1-220, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-220ENST00000520260 TBC1D13Q9NVG8 400 aa6.09□□□□□ -1.43
CTNNA1-220ENST00000520260 ZNF446Q9NWS9 450 aa6.09□□□□□ -1.43
CTNNA1-220ENST00000520260 SNTG2Q9NY99 539 aa6.09□□□□□ -1.43
CTNNA1-220ENST00000520260 EHD2Q9NZN4 543 aa6.09□□□□□ -1.43
CTNNA1-220ENST00000520260 CNTN3Q9P232 1028 aa6.09□□□□□ -1.43
CTNNA1-220ENST00000520260 MRPL42Q9Y6G3 142 aaKnown RBP6.09□□□□□ -1.43
CTNNA1-220ENST00000520260 STYXL1Q9Y6J8 313 aa6.09□□□□□ -1.43
CTNNA1-220ENST00000520260 TRIOBPQ9H2D6 2365 aa6.08□□□□□ -1.44
CTNNA1-220ENST00000520260 ATP8B3O60423 1300 aa6.08□□□□□ -1.44
CTNNA1-220ENST00000520260 A0A087WWV3 80 aa6.08□□□□□ -1.44
CTNNA1-220ENST00000520260 C2orf72A6NCS6 295 aa6.08□□□□□ -1.44
CTNNA1-220ENST00000520260 NRG2O14511 850 aaPredicted RBP6.08□□□□□ -1.44
CTNNA1-220ENST00000520260 SYN3O14994 580 aa6.08□□□□□ -1.44
CTNNA1-220ENST00000520260 MGEA5O60502 916 aa6.08□□□□□ -1.44
CTNNA1-220ENST00000520260 PPP1R37O75864 691 aa6.08□□□□□ -1.44
CTNNA1-220ENST00000520260 B3GAT3O94766 335 aa6.08□□□□□ -1.44
CTNNA1-220ENST00000520260 ZRANB2O95218 330 aaKnown RBP eCLIP6.08□□□□□ -1.44
CTNNA1-220ENST00000520260 POMCP01189 267 aa6.08□□□□□ -1.44
CTNNA1-220ENST00000520260 POU3F3P20264 500 aaPredicted RBP6.08□□□□□ -1.44
CTNNA1-220ENST00000520260 AKAP5P24588 427 aa6.08□□□□□ -1.44
CTNNA1-220ENST00000520260 ELF1P32519 619 aa6.08□□□□□ -1.44
CTNNA1-220ENST00000520260 GTF2H1P32780 548 aa6.08□□□□□ -1.44
CTNNA1-220ENST00000520260 SCNN1GP51170 649 aa6.08□□□□□ -1.44
CTNNA1-220ENST00000520260 OSTNP61366 133 aa6.08□□□□□ -1.44
CTNNA1-220ENST00000520260 RBP5P82980 135 aa6.08□□□□□ -1.44
CTNNA1-220ENST00000520260 DPYDQ12882 1025 aa6.08□□□□□ -1.44
CTNNA1-220ENST00000520260 PAK1Q13153 545 aa6.08□□□□□ -1.44
CTNNA1-220ENST00000520260 PLD1Q13393 1074 aa6.08□□□□□ -1.44
CTNNA1-220ENST00000520260 CUL4BQ13620 913 aa6.08□□□□□ -1.44
CTNNA1-220ENST00000520260 GPNMBQ14956 572 aa6.08□□□□□ -1.44
CTNNA1-220ENST00000520260 MAPRE1Q15691 268 aaKnown RBP6.08□□□□□ -1.44
CTNNA1-220ENST00000520260 ELF2Q15723 593 aa6.08□□□□□ -1.44
CTNNA1-220ENST00000520260 SNRNP35Q16560 246 aaKnown RBP6.08□□□□□ -1.44
CTNNA1-220ENST00000520260 TEX35Q5T0J7 233 aa6.08□□□□□ -1.44
CTNNA1-220ENST00000520260 UBXN11Q5T124 520 aa6.08□□□□□ -1.44
CTNNA1-220ENST00000520260 NT5DC1Q5TFE4 455 aa6.08□□□□□ -1.44
CTNNA1-220ENST00000520260 LIN9Q5TKA1 542 aa6.08□□□□□ -1.44
CTNNA1-220ENST00000520260 SMYD5Q6GMV2 418 aa6.08□□□□□ -1.44
CTNNA1-220ENST00000520260 ZNF280DQ6N043 979 aa6.08□□□□□ -1.44
CTNNA1-220ENST00000520260 CES5AQ6NT32 575 aa6.08□□□□□ -1.44
CTNNA1-220ENST00000520260 CYP26C1Q6V0L0 522 aa6.08□□□□□ -1.44
CTNNA1-220ENST00000520260 DSTYKQ6XUX3 929 aa6.08□□□□□ -1.44
CTNNA1-220ENST00000520260 SLC9A9Q8IVB4 645 aa6.08□□□□□ -1.44
CTNNA1-220ENST00000520260 FMNL3Q8IVF7 1028 aa6.08□□□□□ -1.44
CTNNA1-220ENST00000520260 BRSK2Q8IWQ3 736 aa6.08□□□□□ -1.44
CTNNA1-220ENST00000520260 TMEM86AQ8N2M4 240 aa6.08□□□□□ -1.44
CTNNA1-220ENST00000520260 ELMOD1Q8N336 334 aa6.08□□□□□ -1.44
CTNNA1-220ENST00000520260 LRRC52Q8N7C0 313 aa6.08□□□□□ -1.44
CTNNA1-220ENST00000520260 LINC01599Q8WXQ3 324 aa6.08□□□□□ -1.44
CTNNA1-220ENST00000520260 TAF4BQ92750 862 aa6.08□□□□□ -1.44
CTNNA1-220ENST00000520260 STAMQ92783 540 aa6.08□□□□□ -1.44
CTNNA1-220ENST00000520260 CASP10Q92851 521 aa6.08□□□□□ -1.44
CTNNA1-220ENST00000520260 WNT2BQ93097 391 aa6.08□□□□□ -1.44
CTNNA1-220ENST00000520260 CEP63Q96MT8 703 aa6.08□□□□□ -1.44
CTNNA1-220ENST00000520260 POP1Q99575 1024 aaKnown RBP6.08□□□□□ -1.44
CTNNA1-220ENST00000520260 TCF25Q9BQ70 676 aa6.08□□□□□ -1.44
CTNNA1-220ENST00000520260 BPIFA3Q9BQP9 254 aa6.08□□□□□ -1.44
CTNNA1-220ENST00000520260 EIF2AQ9BY44 585 aaKnown RBP6.08□□□□□ -1.44
CTNNA1-220ENST00000520260 DNAJC25Q9H1X3 360 aa6.08□□□□□ -1.44
CTNNA1-220ENST00000520260 PTPRHQ9HD43 1115 aa6.08□□□□□ -1.44
CTNNA1-220ENST00000520260 AGPAT3Q9NRZ7 376 aa6.08□□□□□ -1.44
CTNNA1-220ENST00000520260 ANO10Q9NW15 660 aa6.08□□□□□ -1.44
CTNNA1-220ENST00000520260 ARGLU1Q9NWB6 273 aaPredicted RBP6.08□□□□□ -1.44
CTNNA1-220ENST00000520260 HSPBP1Q9NZL4 362 aa6.08□□□□□ -1.44
CTNNA1-220ENST00000520260 ADAM28Q9UKQ2 775 aa6.08□□□□□ -1.44
CTNNA1-220ENST00000520260 MTUS1Q9ULD2 1270 aa6.08□□□□□ -1.44
CTNNA1-220ENST00000520260 TRAF3IP3Q9Y228 551 aa6.08□□□□□ -1.44
CTNNA1-220ENST00000520260 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.08□□□□□ -1.441e-14■□□□□ 10.4
CTNNA1-220ENST00000520260 FHOD1Q9Y613 1164 aa6.08□□□□□ -1.44
CTNNA1-220ENST00000520260 V9GYY5 206 aaPredicted RBP6.08□□□□□ -1.44
CTNNA1-220ENST00000520260 RALGAPA2Q2PPJ7 1873 aa6.08□□□□□ -1.44
CTNNA1-220ENST00000520260 TTC3P53804 2025 aa6.08□□□□□ -1.44
CTNNA1-220ENST00000520260 MYH11P35749 1972 aa6.07□□□□□ -1.44
CTNNA1-220ENST00000520260 DNAH12Q6ZR08 3092 aa6.07□□□□□ -1.44
CTNNA1-220ENST00000520260 A0A087X0B3 334 aa6.07□□□□□ -1.44
CTNNA1-220ENST00000520260 SMIM28A0A1B0GU29 152 aa6.07□□□□□ -1.44
CTNNA1-220ENST00000520260 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.07□□□□□ -1.44
CTNNA1-220ENST00000520260 USP27XA6NNY8 438 aa6.07□□□□□ -1.44
CTNNA1-220ENST00000520260 GRXCR1A8MXD5 290 aa6.07□□□□□ -1.44
CTNNA1-220ENST00000520260 PODXLO00592 558 aa6.07□□□□□ -1.44
CTNNA1-220ENST00000520260 IKBKBO14920 756 aa6.07□□□□□ -1.44
CTNNA1-220ENST00000520260 HUS1O60921 280 aa6.07□□□□□ -1.44
CTNNA1-220ENST00000520260 XYLBO75191 536 aa6.07□□□□□ -1.44
CTNNA1-220ENST00000520260 FGF19O95750 216 aa6.07□□□□□ -1.44
CTNNA1-220ENST00000520260 NR3C1P04150 777 aa6.07□□□□□ -1.44
CTNNA1-220ENST00000520260 SOD2P04179 222 aa6.07□□□□□ -1.44
CTNNA1-220ENST00000520260 KRT19P08727 400 aa6.07□□□□□ -1.44
CTNNA1-220ENST00000520260 PNMA6AP0CW24 399 aaPredicted RBP6.07□□□□□ -1.44
CTNNA1-220ENST00000520260 CXCL8P10145 99 aa6.07□□□□□ -1.44
CTNNA1-220ENST00000520260 MYBP10242 640 aa6.07□□□□□ -1.44
CTNNA1-220ENST00000520260 HOXB8P17481 243 aaPredicted RBP6.07□□□□□ -1.44
CTNNA1-220ENST00000520260 NR2F2P24468 414 aa6.07□□□□□ -1.44
CTNNA1-220ENST00000520260 PCSK1P29120 753 aa6.07□□□□□ -1.44
CTNNA1-220ENST00000520260 ATICP31939 592 aa6.07□□□□□ -1.44
CTNNA1-220ENST00000520260 PLA2G4AP47712 749 aa6.07□□□□□ -1.44
CTNNA1-220ENST00000520260 NDUFV1P49821 464 aa6.07□□□□□ -1.44
CTNNA1-220ENST00000520260 TAF6P49848 677 aa6.07□□□□□ -1.44
CTNNA1-220ENST00000520260 CYP2J2P51589 502 aa6.07□□□□□ -1.44
CTNNA1-220ENST00000520260 HNRNPH2P55795 449 aaKnown RBP6.07□□□□□ -1.44
CTNNA1-220ENST00000520260 SLC8A3P57103 927 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms